Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i22f
         (573 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047691-1|AAH47691.1|  222|Homo sapiens cytochrome b-561 domain...    39   0.014
AF040704-1|AAC70911.1|  222|Homo sapiens putative tumor suppress...    39   0.014
AC002481-2|AAB67309.1|  222|Homo sapiens WUGSC:H_LUCA12.2 protein.     39   0.014

>BC047691-1|AAH47691.1|  222|Homo sapiens cytochrome b-561 domain
           containing 2 protein.
          Length = 222

 Score = 38.7 bits (86), Expect = 0.014
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +3

Query: 204 VALSAFIFANVFH--GTNNLKQHIYLCVTGYVILMSQAILTFSPNNGWTNSLKYPNKKMV 377
           VAL   IF  V    G++    H  L    +  LM++A+L FSP +   +SL    +   
Sbjct: 26  VALGFTIFVAVLARPGSSLFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARC 85

Query: 378 HWVMQV 395
           HWV+Q+
Sbjct: 86  HWVLQL 91


>AF040704-1|AAC70911.1|  222|Homo sapiens putative tumor suppressor
           protein protein.
          Length = 222

 Score = 38.7 bits (86), Expect = 0.014
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +3

Query: 204 VALSAFIFANVFH--GTNNLKQHIYLCVTGYVILMSQAILTFSPNNGWTNSLKYPNKKMV 377
           VAL   IF  V    G++    H  L    +  LM++A+L FSP +   +SL    +   
Sbjct: 26  VALGFTIFVAVLARPGSSLFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARC 85

Query: 378 HWVMQV 395
           HWV+Q+
Sbjct: 86  HWVLQL 91


>AC002481-2|AAB67309.1|  222|Homo sapiens WUGSC:H_LUCA12.2 protein.
          Length = 222

 Score = 38.7 bits (86), Expect = 0.014
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +3

Query: 204 VALSAFIFANVFH--GTNNLKQHIYLCVTGYVILMSQAILTFSPNNGWTNSLKYPNKKMV 377
           VAL   IF  V    G++    H  L    +  LM++A+L FSP +   +SL    +   
Sbjct: 26  VALGFTIFVAVLARPGSSLFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARC 85

Query: 378 HWVMQV 395
           HWV+Q+
Sbjct: 86  HWVLQL 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,047,790
Number of Sequences: 237096
Number of extensions: 1407713
Number of successful extensions: 3087
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3087
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)