Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12i22f
(573 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 26 0.23
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 26 0.23
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 26 0.23
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 26 0.23
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 26 0.23
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 26 0.23
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.70
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 24 1.2
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 24 1.2
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 24 1.2
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 24 1.2
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 24 1.2
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 24 1.2
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 24 1.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 3.8
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.23
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 104 RSQYPTNGSKTRNQCSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
R+ Y +G ++ CS DR++ + D R D+ + H+R+ R S++
Sbjct: 242 RNSYRNDGERS---CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 291
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.23
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 104 RSQYPTNGSKTRNQCSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
R+ Y +G ++ CS DR++ + D R D+ + H+R+ R S++
Sbjct: 242 RNSYRNDGERS---CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 291
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.23
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 104 RSQYPTNGSKTRNQCSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
R+ Y +G ++ CS DR++ + D R D+ + H+R+ R S++
Sbjct: 242 RNSYRNDGERS---CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 291
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.23
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 104 RSQYPTNGSKTRNQCSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
R+ Y +G ++ CS DR++ + D R D+ + H+R+ R S++
Sbjct: 242 RNSYRNDGERS---CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 291
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.23
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 104 RSQYPTNGSKTRNQCSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
R+ Y +G ++ CS DR++ + D R D+ + H+R+ R S++
Sbjct: 242 RNSYRNDGERS---CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 291
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 26.2 bits (55), Expect = 0.23
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +2
Query: 104 RSQYPTNGSKTRNQCSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
R+ Y +G ++ CS DR++ + D R D+ + H+R+ R S++
Sbjct: 242 RNSYRNDGERS---CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 291
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.70
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 101 YRSQYPTNGSKTRNQ----CSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
Y +G+ RN CS DR++ + D R D+ + H+R+ R S++
Sbjct: 234 YEDSRHEDGNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 291
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 146 CSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
CS DR++ + D R D+ + H+R+ R S++
Sbjct: 4 CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 146 CSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
CS DR++ + D R D+ + H+R+ R S++
Sbjct: 4 CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 146 CSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
CS DR++ + D R D+ + H+R+ R S++
Sbjct: 4 CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 146 CSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
CS DR++ + D R D+ + H+R+ R S++
Sbjct: 4 CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 146 CSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
CS DR++ + D R D+ + H+R+ R S++
Sbjct: 4 CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 146 CSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
CS DR++ + D R D+ + H+R+ R S++
Sbjct: 4 CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 146 CSHDRTKCREYCDTRPDRRGGAQRIHIRQCLPRHEQSKA 262
CS DR++ + D R D+ + H+R+ R S++
Sbjct: 4 CSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRS 42
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 193 RTCVTVFTTFSTIMATLI 140
R C+ VFT F T++AT++
Sbjct: 434 RLCLIVFTLF-TVLATIV 450
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 193 RTCVTVFTTFSTIMATLI 140
R C+ VFT F T++AT++
Sbjct: 434 RLCLIVFTLF-TVLATIV 450
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 193 RTCVTVFTTFSTIMATLI 140
R C+ VFT F T++AT++
Sbjct: 434 RLCLIVFTLF-TVLATIV 450
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 193 RTCVTVFTTFSTIMATLI 140
R C+ VFT F T++AT++
Sbjct: 434 RLCLIVFTLF-TVLATIV 450
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 193 RTCVTVFTTFSTIMATLI 140
R C+ VFT F T++AT++
Sbjct: 434 RLCLIVFTLF-TVLATIV 450
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 193 RTCVTVFTTFSTIMATLI 140
R C+ VFT F T++AT++
Sbjct: 434 RLCLIVFTLF-TVLATIV 450
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 193 RTCVTVFTTFSTIMATLI 140
R C+ VFT F T++AT++
Sbjct: 502 RLCLIVFTLF-TVLATIV 518
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 193 RTCVTVFTTFSTIMATLI 140
R C+ VFT F T++AT++
Sbjct: 502 RLCLIVFTLF-TVLATIV 518
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 242 VEDIGEYECAERHRA 198
VED GEY C +RA
Sbjct: 491 VEDGGEYSCMAENRA 505
Score = 21.4 bits (43), Expect = 6.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 201 RLSGRVSQYSRHLVRSW 151
R+ R++ + H+VR W
Sbjct: 1311 RVPARITSFGGHVVRPW 1327
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 242 VEDIGEYECAERHRA 198
VED GEY C +RA
Sbjct: 491 VEDGGEYSCMAENRA 505
Score = 21.4 bits (43), Expect = 6.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 201 RLSGRVSQYSRHLVRSW 151
R+ R++ + H+VR W
Sbjct: 1307 RVPARITSFGGHVVRPW 1323
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 191 PDRRGGAQRIHIRQCLPRHEQSKAAHLFVRYRVRDLNVSSDIDLQSEQWLD 343
P RR +H C P QS+++ FV R + S +DL E L+
Sbjct: 340 PPRRKNNCPLH---CKPELGQSQSSPKFVARREESNSSSPSLDLGKEGGLE 387
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,336
Number of Sequences: 438
Number of extensions: 2973
Number of successful extensions: 28
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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