Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i19r
         (632 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    32   0.017
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    31   0.030
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    30   0.053
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    27   0.65 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   1.1  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   2.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.6  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   2.6  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.1  
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          23   6.1  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   6.1  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   6.1  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   8.1  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 31.9 bits (69), Expect = 0.017
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 345 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHA 443
           P PL + E + C+QR+ A P+A R  IRR   A
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASRAVIRREERA 874


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 31.1 bits (67), Expect = 0.030
 Identities = 22/136 (16%), Positives = 55/136 (40%)
 Frame = -3

Query: 573  EERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEEL 394
            E  + + E  LK ++  +EE+ K + +  +    ++ ++            + V+LEE++
Sbjct: 786  ERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQI 845

Query: 393  RVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLE 214
              +   L  +  + ++        K QIK    ++               KL K+ D L+
Sbjct: 846  AALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELK 905

Query: 213  DELVAEKEKYKDIGDD 166
             E+  ++ +   + ++
Sbjct: 906  LEIKKKENEITKVRNE 921



 Score = 23.8 bits (49), Expect = 4.6
 Identities = 38/202 (18%), Positives = 80/202 (39%)
 Frame = -3

Query: 624  DESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXX 445
            DE   A   L+ +    +E+M++   +LK      ++  K+ DE+  ++   E ++    
Sbjct: 860  DEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEITKVR 919

Query: 444  XXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXX 265
                    +I  +E++   +  + +   V     N R +  K   +    +LK       
Sbjct: 920  NENKDGYDRISGMEQKYPWIPEDKEFFGVK----NTRYDYNKEDPQEAGRKLKKLQDSKD 975

Query: 264  XXXRSVQKLQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE*ASVIQRPEV*VPWQ 85
               R+V +    +   E+E   E  + K + +D D   ++ I+ +     ++ ++ V W 
Sbjct: 976  KMSRNVNQKAMVLLEREEEQYKEVMRRKKVVED-DKKKIQAIITD-LDEEKKKKLKVAW- 1032

Query: 84   HHQPAIQYSNIDSNFNFVFLTL 19
                    S +D NF  +F TL
Sbjct: 1033 --------SEVDENFGSIFSTL 1046


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 30.3 bits (65), Expect = 0.053
 Identities = 22/133 (16%), Positives = 56/133 (42%)
 Frame = -3

Query: 603  KVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXX 424
            KVL+ +     +++D L   + +     + +++   +   K+  +E ++           
Sbjct: 896  KVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGN 955

Query: 423  SKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQ 244
             +  +LEEE   +   L+ ++++ EKA++     K +I  L  R            + +Q
Sbjct: 956  DERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQ 1015

Query: 243  KLQKEVDRLEDEL 205
             ++ ++   +D L
Sbjct: 1016 TIETKLQETKDTL 1028



 Score = 26.6 bits (56), Expect = 0.65
 Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
 Frame = -3

Query: 573 EERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEEL 394
           +E  DAL+ +  E   L +E  K+YDE+       E+ L           + +    E  
Sbjct: 340 DETYDALKAERVEKEKLVKEEIKQYDELVSAKESKESTLKNSLDKFAKVQANMRATNERR 399

Query: 393 R-----VVGNNLKSLEVSE-EKANQRE-EEYKNQIKTLT---TRLKXXXXXXXXXXRSVQ 244
           +     +     + LE+ +  K N++E EE + +I++LT   T ++          +   
Sbjct: 400 KKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTANLATLKDET 459

Query: 243 K-LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE*ASVIQR 109
           K L +E ++L+ EL+  K    +    L  A  EL + +   V +R
Sbjct: 460 KVLLEEKEKLQTELIELKRAVDESKSALSIAESELKICQHDEVTER 505


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 26.6 bits (56), Expect = 0.65
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
 Frame = -3

Query: 621 ESERARKVLENRSLADEERMDALE-------NQLKEARFLAEEADKKYDEV 490
           + E   +  E  + ADEE  D  E       ++L+EAR +AEE +++  E+
Sbjct: 76  DEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 16/70 (22%), Positives = 32/70 (45%)
 Frame = -3

Query: 387 VGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDE 208
           +  N K +E  + +A +R+E+  + IKT    L+          + V   ++ +  L+ E
Sbjct: 427 IEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSE 486

Query: 207 LVAEKEKYKD 178
           L   +E+  D
Sbjct: 487 LDNVREQLGD 496


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 375 LKSLEVSEEKANQREEEYKNQIKTLTTRLK 286
           LKS +   +KA+QR +E K  IKT    +K
Sbjct: 219 LKSADGDVQKAHQRIDEGKRTIKTYEALVK 248


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
 Frame = -3

Query: 420 KIVELEEELRVVGNNLKSLEVSEEKANQREEE-----------YKNQIKTLTTRLKXXXX 274
           K+ ++ E LR + + LK+LE  +E+ ++ ++            Y+ ++K    +L+    
Sbjct: 185 KLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETELKETRKQLEELDG 244

Query: 273 XXXXXXRS----VQKLQKEVDRLEDELVAEKEKYKDI 175
                        Q++QK  DRL++   A K+  KD+
Sbjct: 245 QRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDV 281


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 3/147 (2%)
 Frame = -3

Query: 573 EERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEEL 394
           E R++ALE QL+  R   E   + +  +ARK A +E +             K+ +     
Sbjct: 198 EARLEALEAQLQSMRAREEFQQQIHVCMARK-AWLEYEELFLLYSATLKDLKLAK----- 251

Query: 393 RVVGNNLKSLEVSEEKANQREEEYKNQI---KTLTTRLKXXXXXXXXXXRSVQKLQKEVD 223
                  K  E  E++ NQ ++E +  +   K L T               +  L+++ +
Sbjct: 252 -------KCTEEKEQQYNQFKQEMEAILARKKELETSKAKQVAIGQRSTDEINSLEEKTE 304

Query: 222 RLEDELVAEKEKYKDIGDDLDTAFVEL 142
           RLED +  +K +  D     D    EL
Sbjct: 305 RLEDTISKQKRELMDALAKADERKTEL 331



 Score = 23.0 bits (47), Expect = 8.1
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -3

Query: 618 SERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 463
           + R   +LE R    EER +  E   +      + A K    V +KLA V+A
Sbjct: 725 ASREHDLLEQRIRLFEERNNDREANFRLLEDAYQSAKKTLANVEKKLAEVKA 776


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
 Frame = +3

Query: 513 PPQRGTWLPSADSRGRP--CAP--HPPTTCSRAP 602
           PP R  W P     GRP    P  H PTT + AP
Sbjct: 90  PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 79  MVLPGHSDFGSLYNGSLFL-ENELYEGGIQIVSDVLVFLLFGDKFVFKP 222
           M  P  SD   +  G L+  EN +    I + S+ +V +LFG K  F P
Sbjct: 440 MFEPPVSDPNLIEGGLLYTPENLINLSDISVSSETVVQVLFGLKRSFTP 488


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = -3

Query: 363 EVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLED 211
           ++ ++   Q E+E++    TL  +L              + LQK++D L D
Sbjct: 99  QLLDDAQRQMEQEHRQYAATLEEQLHAAQQETQQEQEMKKALQKQLDALTD 149


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -3

Query: 330 EEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEK--EKYK 181
           E++KN  +++ + L           + V+K+ K+VD L  +L+  K  + YK
Sbjct: 463 EKFKNICESIISELLPLQKPAVEVEKVVKKVSKDVDMLFGDLLKNKGAQNYK 514


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 576 PPTTCSRAPYVRARIHRRP 632
           PP   S  PY+   IHR P
Sbjct: 230 PPPPTSNEPYLVVPIHRHP 248


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -1

Query: 359  SQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRS 225
            ++   PT      ++ S P PP+  R + +P SP       +RR+
Sbjct: 1088 NEAAEPTGEVEEEEV-SPPVPPIPPRSRRLPPSPRTTEMRRRRRN 1131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,816
Number of Sequences: 2352
Number of extensions: 11568
Number of successful extensions: 53
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)