Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12i19f
(597 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 1.7
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 1.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 1.7
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 22 5.3
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 21 6.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.2
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 9.2
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 591 PQPWPAYEQPHRISCRPPQRGTWLPS 514
P P+P + P+ RPPQ + P+
Sbjct: 153 PTPFPRFIPPNAYRFRPPQNPRFGPT 178
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 591 PQPWPAYEQPHRISCRPPQRGTWLPS 514
P P+P + P+ RPPQ + P+
Sbjct: 153 PTPFPRFIPPNAYRFRPPQNPRFGPT 178
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 591 PQPWPAYEQPHRISCRPPQRGTWLPS 514
P P+P + P+ RPPQ + P+
Sbjct: 391 PTPFPRFIPPNAYRFRPPQNPRFGPT 416
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 450 RKVLENRSLADEERMDALENQLKEARFLA 536
R+ R+ E++ ALEN+ K R+L+
Sbjct: 6 REARRARTAFTYEQLVALENKFKTTRYLS 34
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 21.4 bits (43), Expect = 6.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 438 SERARKVLENRSLADEERMDALENQLKEARFLAEEADKK 554
SER EN L E+ ALE+ LK + E+ +++
Sbjct: 95 SERRNIFGENDELIAEKVAHALESGLKVIACIGEKLEER 133
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 591 PQPWPAYEQPHRISCRPP 538
P P+P + P+ RPP
Sbjct: 159 PTPFPRFIPPNAYRLRPP 176
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 591 PQPWPAYEQPHRISCRPP 538
P P+P + P+ RPP
Sbjct: 159 PTPFPRFIPPNAYRLRPP 176
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -1
Query: 414 RTAWRWRSRDAPRTSRGPPPAV 349
R W+ RSRD R P +
Sbjct: 60 RETWKERSRDRTERERSREPKI 81
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -1
Query: 414 RTAWRWRSRDAPRTSRGPPPAV 349
R W+ RSRD R P +
Sbjct: 60 RETWKERSRDRTERERSREPKI 81
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -1
Query: 414 RTAWRWRSRDAPRTSRGPPPAV 349
R W+ RSRD R P +
Sbjct: 60 RETWKERSRDRTERERSREPKI 81
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -1
Query: 414 RTAWRWRSRDAPRTSRGPPPAV 349
R W+ RSRD R P +
Sbjct: 60 RETWKERSRDRTERERSREPKI 81
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 591 PQPWPAYEQPHRISCRPP 538
P P+P + P+ RPP
Sbjct: 387 PTPFPRFIPPNAYRLRPP 404
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1
Query: 10 HSTRRLDIFSSKGAEKTK 63
HS++ +++F S GA+ T+
Sbjct: 129 HSSKLVELFLSLGADATR 146
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,941
Number of Sequences: 438
Number of extensions: 2745
Number of successful extensions: 37
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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