Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i10r
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    26   0.93 
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   6.5  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    23   8.7  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 26.2 bits (55), Expect = 0.93
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 533 MPDLDSSVPTTGYNNGVGM 589
           +PD D S P+ GY N + M
Sbjct: 367 LPDYDDSTPSNGYTNEIEM 385


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 511 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 416
           INH G++   N        SL  +GG+  + M
Sbjct: 63  INHQGNAASANVAVADRQQSLILAGGRRQRIM 94


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 490 GYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 395
           GYLN   VS DG    +  +D K      +DG
Sbjct: 43  GYLNRKGVSCDGQTTINSCEDCKRKFGRCSDG 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,330
Number of Sequences: 2352
Number of extensions: 17744
Number of successful extensions: 44
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)