Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i08r
         (765 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0048 - 19614636-19616076,19618621-19618992,19619057-19619451     28   7.1  
10_08_0931 - 21647562-21649037                                         28   7.1  

>11_06_0048 - 19614636-19616076,19618621-19618992,19619057-19619451
          Length = 735

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 269 LGSFRILDHILVNNDKKFLQ*DMNYVKNYKFQCLTAFFCWT 391
           LGS   L  + +  +K  +  D   + +Y+F+CL+ F  W+
Sbjct: 615 LGSIPSLSRLYLGVEKPTVDRDERLIISYRFKCLSLFEYWS 655


>10_08_0931 - 21647562-21649037
          Length = 491

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 15/45 (33%), Positives = 29/45 (64%)
 Frame = -2

Query: 389 SNKKKQLNIEIYSSSHNSYPIAKISCRYLRECGQEFESCPKKKPN 255
           S+ K +++I+  SSS + YP+AK S R +R   +  +S  +++P+
Sbjct: 326 SSAKPRISIDSSSSSSSYYPVAK-SVRTIRGGRESLQSQSQEQPD 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,369,827
Number of Sequences: 37544
Number of extensions: 278879
Number of successful extensions: 573
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)