Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i07r
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    27   0.12 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.49 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   4.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   4.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   4.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.0  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 627 VIKPVIH*YWKNAKTLNGTSLDIYKQTRLTNY 532
           ++KP+I  Y+K  KTLNG  +   ++    ++
Sbjct: 126 IVKPIIAFYYKPIKTLNGHEIKFIRKEEYISF 157


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 701 TCRTYCGSLQCWPE 660
           TC   CGS Q WP+
Sbjct: 81  TCSMLCGSTQLWPQ 94


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 307 LMTIGQYDYDITKGPNPDYLCLIKCRQEVCEKL 209
           ++++G+Y     K  N    C  +C +  CEKL
Sbjct: 865 IVSLGEYKCVTCKCENGKPTCWRECDKATCEKL 897


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 526 SPGLFMVETVDSEKLADNLNKQWLKY 449
           S GL+ ++ V + +L   L+  W KY
Sbjct: 322 SEGLYHLDEVYNNQLLTRLDDNWNKY 347


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 526 SPGLFMVETVDSEKLADNLNKQWLKY 449
           S GL+ ++ V + +L   L+  W KY
Sbjct: 322 SEGLYHLDEVYNNQLLTRLDDNWNKY 347


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 526 SPGLFMVETVDSEKLADNLNKQWLKY 449
           S GL+ ++ V + +L   L+  W KY
Sbjct: 322 SEGLYHLDEVYNNQLLTRLDDNWNKY 347


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 433 FPSPSYISTIAYSNYQLIFLNQLFQP 510
           FP   +I+  AY N ++  L   + P
Sbjct: 173 FPETQFIAVTAYQNEEVTALKIKYNP 198


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -1

Query: 737 DSTKIGCCIKN*TCRTYCGSLQC 669
           D  + G C  N TC    G  +C
Sbjct: 262 DDCRPGACHNNGTCLDKVGGFEC 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,724
Number of Sequences: 336
Number of extensions: 4108
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)