SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i07r
         (755 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533532-1|CAG38563.1|  275|Homo sapiens PROSC protein.               290   3e-78
BC012334-1|AAH12334.1|  275|Homo sapiens proline synthetase co-t...   290   3e-78
AB018566-1|BAA36842.1|  275|Homo sapiens Proline synthetase asso...   290   3e-78
BC127772-1|AAI27773.1|  863|Homo sapiens KIF5C protein protein.        33   0.84 
BC110287-1|AAI10288.1|  725|Homo sapiens KIF5C protein protein.        33   0.84 
AC108512-1|AAX82030.1|  684|Homo sapiens unknown protein.              33   0.84 
AB209191-1|BAD92428.1|  265|Homo sapiens Kinesin heavy chain iso...    33   0.84 
AB011103-1|BAA25457.2|  999|Homo sapiens KIAA0531 protein protein.     33   0.84 
M14642-1|AAA51745.1|  396|Homo sapiens APOA4 protein.                  33   1.5  
M13654-1|AAA51744.1|  396|Homo sapiens APOA4 protein.                  33   1.5  
BC067299-1|AAH67299.1|  490|Homo sapiens Mdm4, transformed 3T3 c...    32   2.6  
AY207458-1|AAO13494.1|  490|Homo sapiens Mdm4, transformed 3T3 c...    32   2.6  
AL512306-5|CAI14100.1|  490|Homo sapiens Mdm4, transformed 3T3 c...    32   2.6  
AL512306-3|CAI14098.1|  213|Homo sapiens Mdm4, transformed 3T3 c...    32   2.6  
AK223228-1|BAD96948.1|  490|Homo sapiens mouse double minute 4 h...    32   2.6  
AF007111-1|AAB62928.1|  490|Homo sapiens MDM2-like p53-binding p...    32   2.6  
BC050529-1|AAH50529.1| 1050|Homo sapiens ankyrin repeat domain 2...    31   3.4  
AL590543-3|CAI10943.1|  722|Homo sapiens chromosome 6 open readi...    31   3.4  
AL359494-1|CAH71980.1|  722|Homo sapiens chromosome 6 open readi...    31   3.4  
AK054561-1|BAB70755.1| 1060|Homo sapiens FLJ00040 protein protein.     31   3.4  
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250...    30   7.8  
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ...    30   7.8  
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc...    30   7.8  

>CR533532-1|CAG38563.1|  275|Homo sapiens PROSC protein.
          Length = 275

 Score =  290 bits (712), Expect = 3e-78
 Identities = 132/217 (60%), Positives = 166/217 (76%)
 Frame = -2

Query: 745 LPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDKASDPLILEKCKDIKWHFI 566
           LP I PRLVAVSK KP ++++EAY  GQR FGENYV EL +KAS+P IL  C +IKWHFI
Sbjct: 35  LPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFI 94

Query: 565 GHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAK 386
           GHLQ   +NKL+  P LFM+ETVDS KLAD +N  W + +   ERL+VMVQ+NTSGE++K
Sbjct: 95  GHLQKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQR-KGSPERLKVMVQINTSGEESK 153

Query: 385 SGLEPLETTKAVEHILENCPNLDFQGLMTIGQYDYDITKGPNPDYLCLIKCRQEVCEKLN 206
            GL P ET   VEHI   CPNL+F GLMTIG + +D+++GPNPD+  L+  R+E+C+KLN
Sbjct: 154 HGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLN 213

Query: 205 LDIKDVELSMGMSSDFAHAIELGATTVRVGSTIFGAR 95
           +    VELSMGMS+DF HA+E+G+T VR+GSTIFG R
Sbjct: 214 IPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGER 250


>BC012334-1|AAH12334.1|  275|Homo sapiens proline synthetase
           co-transcribed homolog (bacterial) protein.
          Length = 275

 Score =  290 bits (712), Expect = 3e-78
 Identities = 132/217 (60%), Positives = 166/217 (76%)
 Frame = -2

Query: 745 LPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDKASDPLILEKCKDIKWHFI 566
           LP I PRLVAVSK KP ++++EAY  GQR FGENYV EL +KAS+P IL  C +IKWHFI
Sbjct: 35  LPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFI 94

Query: 565 GHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAK 386
           GHLQ   +NKL+  P LFM+ETVDS KLAD +N  W + +   ERL+VMVQ+NTSGE++K
Sbjct: 95  GHLQKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQR-KGSPERLKVMVQINTSGEESK 153

Query: 385 SGLEPLETTKAVEHILENCPNLDFQGLMTIGQYDYDITKGPNPDYLCLIKCRQEVCEKLN 206
            GL P ET   VEHI   CPNL+F GLMTIG + +D+++GPNPD+  L+  R+E+C+KLN
Sbjct: 154 HGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLN 213

Query: 205 LDIKDVELSMGMSSDFAHAIELGATTVRVGSTIFGAR 95
           +    VELSMGMS+DF HA+E+G+T VR+GSTIFG R
Sbjct: 214 IPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGER 250


>AB018566-1|BAA36842.1|  275|Homo sapiens Proline synthetase
           associated protein.
          Length = 275

 Score =  290 bits (712), Expect = 3e-78
 Identities = 132/217 (60%), Positives = 166/217 (76%)
 Frame = -2

Query: 745 LPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDKASDPLILEKCKDIKWHFI 566
           LP I PRLVAVSK KP ++++EAY  GQR FGENYV EL +KAS+P IL  C +IKWHFI
Sbjct: 35  LPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFI 94

Query: 565 GHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAK 386
           GHLQ   +NKL+  P LFM+ETVDS KLAD +N  W + +   ERL+VMVQ+NTSGE++K
Sbjct: 95  GHLQKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQR-KGSPERLKVMVQINTSGEESK 153

Query: 385 SGLEPLETTKAVEHILENCPNLDFQGLMTIGQYDYDITKGPNPDYLCLIKCRQEVCEKLN 206
            GL P ET   VEHI   CPNL+F GLMTIG + +D+++GPNPD+  L+  R+E+C+KLN
Sbjct: 154 HGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLN 213

Query: 205 LDIKDVELSMGMSSDFAHAIELGATTVRVGSTIFGAR 95
           +    VELSMGMS+DF HA+E+G+T VR+GSTIFG R
Sbjct: 214 IPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGER 250


>BC127772-1|AAI27773.1|  863|Homo sapiens KIF5C protein protein.
          Length = 863

 Score = 33.5 bits (73), Expect = 0.84
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -2

Query: 499 VDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVE-HILENCPN 323
           ++ EKL+ + NK  ++ ++ + +L  ++ +N   EQA+  L+ LE T + E   L N   
Sbjct: 650 LEQEKLSSDYNKLKIEDQEREMKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 709

Query: 322 LDFQGLMT 299
           L  Q L T
Sbjct: 710 LFVQDLTT 717


>BC110287-1|AAI10288.1|  725|Homo sapiens KIF5C protein protein.
          Length = 725

 Score = 33.5 bits (73), Expect = 0.84
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -2

Query: 499 VDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVE-HILENCPN 323
           ++ EKL+ + NK  ++ ++ + +L  ++ +N   EQA+  L+ LE T + E   L N   
Sbjct: 512 LEQEKLSSDYNKLKIEDQEREMKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 571

Query: 322 LDFQGLMT 299
           L  Q L T
Sbjct: 572 LFVQDLTT 579


>AC108512-1|AAX82030.1|  684|Homo sapiens unknown protein.
          Length = 684

 Score = 33.5 bits (73), Expect = 0.84
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -2

Query: 499 VDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVE-HILENCPN 323
           ++ EKL+ + NK  ++ ++ + +L  ++ +N   EQA+  L+ LE T + E   L N   
Sbjct: 471 LEQEKLSSDYNKLKIEDQEREMKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 530

Query: 322 LDFQGLMT 299
           L  Q L T
Sbjct: 531 LFVQDLTT 538


>AB209191-1|BAD92428.1|  265|Homo sapiens Kinesin heavy chain
           isoform 5C variant protein.
          Length = 265

 Score = 33.5 bits (73), Expect = 0.84
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -2

Query: 499 VDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVE-HILENCPN 323
           ++ EKL+ + NK  ++ ++ + +L  ++ +N   EQA+  L+ LE T + E   L N   
Sbjct: 52  LEQEKLSSDYNKLKIEDQEREMKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 111

Query: 322 LDFQGLMT 299
           L  Q L T
Sbjct: 112 LFVQDLTT 119


>AB011103-1|BAA25457.2|  999|Homo sapiens KIAA0531 protein protein.
          Length = 999

 Score = 33.5 bits (73), Expect = 0.84
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -2

Query: 499 VDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVE-HILENCPN 323
           ++ EKL+ + NK  ++ ++ + +L  ++ +N   EQA+  L+ LE T + E   L N   
Sbjct: 786 LEQEKLSSDYNKLKIEDQEREMKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 845

Query: 322 LDFQGLMT 299
           L  Q L T
Sbjct: 846 LFVQDLTT 853


>M14642-1|AAA51745.1|  396|Homo sapiens APOA4 protein.
          Length = 396

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -2

Query: 493 SEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVEHIL-ENCPNL 320
           S+K+ DNL +  L+ R E    ++  QVNT  EQ +  L+PL   + +E +L EN  +L
Sbjct: 121 SQKIGDNLRE--LQQRLEPYADQLRTQVNTQAEQLRRQLDPL--AQRMERVLRENADSL 175


>M13654-1|AAA51744.1|  396|Homo sapiens APOA4 protein.
          Length = 396

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -2

Query: 493 SEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVEHIL-ENCPNL 320
           S+K+ DNL +  L+ R E    ++  QVNT  EQ +  L+PL   + +E +L EN  +L
Sbjct: 121 SQKIGDNLRE--LQQRLEPYADQLRTQVNTQAEQLRRQLDPL--AQRMERVLRENADSL 175


>BC067299-1|AAH67299.1|  490|Homo sapiens Mdm4, transformed 3T3 cell
           double minute 4, p53 binding protein (mouse) protein.
          Length = 490

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -2

Query: 583 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 404
           + W F+G+L++N   +  GS  L   + V +  ++D  +  W       E+L V ++V  
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257

Query: 403 SG-EQAKSGLEPLETTKAVE 347
           +  EQ    +  +   K +E
Sbjct: 258 ADTEQTSEEVGKVSDKKVIE 277


>AY207458-1|AAO13494.1|  490|Homo sapiens Mdm4, transformed 3T3 cell
           double minute 4, p53 binding protein (mouse) protein.
          Length = 490

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -2

Query: 583 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 404
           + W F+G+L++N   +  GS  L   + V +  ++D  +  W       E+L V ++V  
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257

Query: 403 SG-EQAKSGLEPLETTKAVE 347
           +  EQ    +  +   K +E
Sbjct: 258 ADTEQTSEEVGKVSDKKVIE 277


>AL512306-5|CAI14100.1|  490|Homo sapiens Mdm4, transformed 3T3 cell
           double minute 4, p53 binding protein (mouse) protein.
          Length = 490

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -2

Query: 583 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 404
           + W F+G+L++N   +  GS  L   + V +  ++D  +  W       E+L V ++V  
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257

Query: 403 SG-EQAKSGLEPLETTKAVE 347
           +  EQ    +  +   K +E
Sbjct: 258 ADTEQTSEEVGKVSDKKVIE 277


>AL512306-3|CAI14098.1|  213|Homo sapiens Mdm4, transformed 3T3 cell
           double minute 4, p53 binding protein (mouse) protein.
          Length = 213

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -2

Query: 583 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 404
           + W F+G+L++N   +  GS  L   + V +  ++D  +  W       E+L V ++V  
Sbjct: 83  LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 142

Query: 403 SG-EQAKSGLEPLETTKAVE 347
           +  EQ    +  +   K +E
Sbjct: 143 ADTEQTSEEVGKVSDKKVIE 162


>AK223228-1|BAD96948.1|  490|Homo sapiens mouse double minute 4
           homolog protein.
          Length = 490

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -2

Query: 583 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 404
           + W F+G+L++N   +  GS  L   + V +  ++D  +  W       E+L V ++V  
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257

Query: 403 SG-EQAKSGLEPLETTKAVE 347
           +  EQ    +  +   K +E
Sbjct: 258 ADTEQTSEEVGKVSDKKVIE 277


>AF007111-1|AAB62928.1|  490|Homo sapiens MDM2-like p53-binding
           protein protein.
          Length = 490

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -2

Query: 583 IKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNT 404
           + W F+G+L++N   +  GS  L   + V +  ++D  +  W       E+L V ++V  
Sbjct: 198 LPWWFLGNLRSNYTPRSNGSTDLQTNQDVGTAIVSDTTDDLWFLNESVSEQLGVGIKVEA 257

Query: 403 SG-EQAKSGLEPLETTKAVE 347
           +  EQ    +  +   K +E
Sbjct: 258 ADTEQTSEEVGKVSDKKVIE 277


>BC050529-1|AAH50529.1| 1050|Homo sapiens ankyrin repeat domain 27
           (VPS9 domain) protein.
          Length = 1050

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -2

Query: 289 YDYDITKGPNPDYLCLIKCRQEVCEKL 209
           YD D+ K  NP YL L KCR ++C K+
Sbjct: 4   YDEDLLK--NPFYLALQKCRPDLCSKV 28


>AL590543-3|CAI10943.1|  722|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 722

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = -2

Query: 601 LEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNK-----QWLKYRKEK 437
           L  C+D+       L     N+L  S  L  ++T++  K  ++LNK     + +K + EK
Sbjct: 549 LNTCRDLHTELKAKLADT--NELKASAWLHFIKTLEQTKAIEDLNKSRDQLEKMKEKAEK 606

Query: 436 ERLRVMVQVNTSGEQAKSGLE 374
           + + V  +++T+  +AK   E
Sbjct: 607 KLMSVKSELDTTEHEAKENKE 627


>AL359494-1|CAH71980.1|  722|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 722

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = -2

Query: 601 LEKCKDIKWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNK-----QWLKYRKEK 437
           L  C+D+       L     N+L  S  L  ++T++  K  ++LNK     + +K + EK
Sbjct: 549 LNTCRDLHTELKAKLADT--NELKASAWLHFIKTLEQTKAIEDLNKSRDQLEKMKEKAEK 606

Query: 436 ERLRVMVQVNTSGEQAKSGLE 374
           + + V  +++T+  +AK   E
Sbjct: 607 KLMSVKSELDTTEHEAKENKE 627


>AK054561-1|BAB70755.1| 1060|Homo sapiens FLJ00040 protein protein.
          Length = 1060

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -2

Query: 289 YDYDITKGPNPDYLCLIKCRQEVCEKL 209
           YD D+ K  NP YL L KCR ++C K+
Sbjct: 14  YDEDLLK--NPFYLALQKCRPDLCSKV 38


>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
           protein.
          Length = 2442

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -2

Query: 580 KWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQV 410
           +W   G     ++ KL G       +TVD +   D+L+K+    +K +E LR  ++V
Sbjct: 425 QWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 481


>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal
           Nek2-associated protein 1 protein.
          Length = 2442

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -2

Query: 580 KWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQV 410
           +W   G     ++ KL G       +TVD +   D+L+K+    +K +E LR  ++V
Sbjct: 425 QWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 481


>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome
           associated protein protein.
          Length = 2442

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -2

Query: 580 KWHFIGHLQTNKINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQV 410
           +W   G     ++ KL G       +TVD +   D+L+K+    +K +E LR  ++V
Sbjct: 425 QWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 481


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,795,422
Number of Sequences: 237096
Number of extensions: 2300286
Number of successful extensions: 7888
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7885
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -