Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i07r
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-4|AAA79348.1|  244|Caenorhabditis elegans Hypothetical pr...   223   1e-58
U41746-3|AAO25990.1|  429|Caenorhabditis elegans Aspartyl protea...    33   0.17 
U41746-2|AAO25989.1|  635|Caenorhabditis elegans Aspartyl protea...    33   0.17 
AF047655-10|AAC04396.1|  335|Caenorhabditis elegans Hypothetical...    30   1.5  
Z49126-2|CAA88939.2|  411|Caenorhabditis elegans Hypothetical pr...    28   8.2  
U97008-1|AAB52310.1|  370|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AL161712-10|CAC35900.1|  533|Caenorhabditis elegans Hypothetical...    28   8.2  

>U37429-4|AAA79348.1|  244|Caenorhabditis elegans Hypothetical
           protein F09E5.8 protein.
          Length = 244

 Score =  223 bits (545), Expect = 1e-58
 Identities = 114/215 (53%), Positives = 138/215 (64%)
 Frame = -2

Query: 727 RLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSDKASDPLILEKCKDIKWHFIGHLQTN 548
           RLVAVSK K  +LI   Y+  QRHFGENYV EL +K+   ++  KC DI+WHFIG +Q+N
Sbjct: 31  RLVAVSKTKSADLIEACYSQNQRHFGENYVQELEEKSD--VLASKCLDIRWHFIGQVQSN 88

Query: 547 KINKLLGSPGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQVNTSGEQAKSGLEPL 368
           KI K+  SPGL+ VETV++EK A   +K+W K+      LRV+VQVNTSGE  K G+E  
Sbjct: 89  KIGKICNSPGLWCVETVETEKHARIFDKEWSKHGANLSPLRVLVQVNTSGEDNKGGIEIG 148

Query: 367 ETTKAVEHILENCPNLDFQGLMTIGQYDYDITKGPNPDYLCLIKCRQEVCEKLNLDIKDV 188
           E  K  E I + C NL F G MTIG +D     G NPD+  L K RQ   E+       V
Sbjct: 149 EAPKLAEFIRKECQNLKFDGFMTIGSFDNSHASGENPDFEKLFKVRQTWAEQTGESADSV 208

Query: 187 ELSMGMSSDFAHAIELGATTVRVGSTIFGARPPKN 83
           ELSMGMS DF  AI  GAT+VRVGS +FGAR  KN
Sbjct: 209 ELSMGMSDDFLQAIHQGATSVRVGSKLFGAREYKN 243


>U41746-3|AAO25990.1|  429|Caenorhabditis elegans Aspartyl protease
           protein 2, isoformb protein.
          Length = 429

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
 Frame = -2

Query: 463 QWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVEHILENCPNLDFQGLMTIGQYD 284
           +W++YRK++E  R M+   ++       +   E    V +I    P   F+ ++  G  +
Sbjct: 38  RWVQYRKDREIRRFMMNKQSNDMSVGQYVNDYEDEAYVGNITIGTPQQQFKVILDTGSSN 97

Query: 283 Y---DITKGPNPDYLCLI-KCRQEVCE 215
               DIT G  P+    +  CR  +C+
Sbjct: 98  LWIPDITCGTKPENCSTVPACRGIICQ 124


>U41746-2|AAO25989.1|  635|Caenorhabditis elegans Aspartyl protease
           protein 2, isoforma protein.
          Length = 635

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
 Frame = -2

Query: 463 QWLKYRKEKERLRVMVQVNTSGEQAKSGLEPLETTKAVEHILENCPNLDFQGLMTIGQYD 284
           +W++YRK++E  R M+   ++       +   E    V +I    P   F+ ++  G  +
Sbjct: 244 RWVQYRKDREIRRFMMNKQSNDMSVGQYVNDYEDEAYVGNITIGTPQQQFKVILDTGSSN 303

Query: 283 Y---DITKGPNPDYLCLI-KCRQEVCE 215
               DIT G  P+    +  CR  +C+
Sbjct: 304 LWIPDITCGTKPENCSTVPACRGIICQ 330


>AF047655-10|AAC04396.1|  335|Caenorhabditis elegans Hypothetical
           protein C17B7.2 protein.
          Length = 335

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 655 FGENYVNELSDKASDPLILEKCKD 584
           F ENY  EL +K    ++ EKCKD
Sbjct: 265 FPENYEEELDEKKKKEMLQEKCKD 288


>Z49126-2|CAA88939.2|  411|Caenorhabditis elegans Hypothetical
           protein DH11.2 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 592 IFPVLMDHWLYHLIRLHSFLRSASGQHC 675
           + PV +   + HL+  HSFL + SG  C
Sbjct: 110 VLPVSLFSHIQHLLEKHSFLAATSGTAC 137


>U97008-1|AAB52310.1|  370|Caenorhabditis elegans Hypothetical
           protein C03G6.10 protein.
          Length = 370

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 322 LDFQGLMTIGQYDYDITKGPNPDYLCLIKCRQEVCEKLNLDIKDVEL 182
           ++FQG   +    +D+TK   P YL    CR   C  + ++ K +++
Sbjct: 41  INFQGKCDLNNQCFDLTKANEP-YLRCRACRYRKCLDVGMNQKAIQI 86


>AL161712-10|CAC35900.1|  533|Caenorhabditis elegans Hypothetical
           protein Y66D12A.13 protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 9   YKLMV*NFNNL*ITLK*LLSNVIYEFFGGLAPKI 110
           Y+L+V  FN   I    +LSNV++  FG  AP++
Sbjct: 15  YQLVVLAFNEFLIFT--MLSNVVFNMFGAAAPRL 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,836,053
Number of Sequences: 27780
Number of extensions: 358003
Number of successful extensions: 967
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)