Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12i05r
(536 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 72 1e-14
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 72 1e-14
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 66 5e-13
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 65 1e-12
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 64 2e-12
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 63 5e-12
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 61 2e-11
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 61 3e-11
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 59 1e-10
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 58 2e-10
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 56 6e-10
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 53 5e-09
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 52 9e-09
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 47 5e-07
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 38 2e-04
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 4.9
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 71.7 bits (168), Expect = 1e-14
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Frame = +1
Query: 142 VIAAIVDGICFVSIYVPHPSL--QIFNEIKNFISVLPRPF---MILGDFNSHHTSWGSSV 306
++AA V GI F+S+Y P PSL Q + + + + +I GDFN+ HT WGS
Sbjct: 77 LVAAKVAGIDFISVYAP-PSLSPQEYERLLEAVELEASSHSHVVIAGDFNAWHTEWGSRR 135
Query: 307 SNSYGYELLDILDMYSLCILNSGS-PTRLTKPGEVISAIDLSICTPQLASSLSWSTLCST 483
+N G ELL ++++ L ILN+GS PT + + S ID++ TP L +W L
Sbjct: 136 NNLRGEELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDVTFATPSLVLHDTWEVL-DF 194
Query: 484 YNSDH 498
SDH
Sbjct: 195 ARSDH 199
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 71.7 bits (168), Expect = 1e-14
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Frame = +1
Query: 142 VIAAIVDGICFVSIYV-PHPSLQIFNEIKNF--ISVLPRPFMILG-DFNSHHTSWGSSVS 309
++AA + GI F+S Y P ++ F E N I V P ++LG DFN+ H +WGS+ +
Sbjct: 75 LVAADIGGITFISCYASPRMTVAEFEEFLNAVEIEVSAHPNVVLGGDFNAWHEAWGSART 134
Query: 310 NSYGYELLDILDMYSLCILNSGSPTRLTKPGEV-ISAIDLSICTPQLASSLSWSTLCSTY 486
G ELL+ ++ L +LN G+ + T G S ID++ +P + +W L S +
Sbjct: 135 KRKGEELLNTVEQLGLIVLNRGNTSTFTGRGIAGESVIDVTFASPSIVRYNTWEVLKSYW 194
Query: 487 NSDH 498
SDH
Sbjct: 195 YSDH 198
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 66.5 bits (155), Expect = 5e-13
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Frame = +1
Query: 127 SNCFSVIAAIVDGICFVSIYVP--HPS--LQIFNEIKNFISVLPRPFMILGDFNSHHTSW 294
SN ++AA + G F+S Y P P+ + F E ++ +I GDFN+ H W
Sbjct: 73 SNTPGLVAAEIGGTTFLSCYAPPRQPTDEFERFIEAVQLETLTHSQVVIAGDFNAWHVEW 132
Query: 295 GSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPG-EVISAIDLSICTPQLASSLSWST 471
GS ++ G ELL + L +LN G+ + G S +D++ TP +A +W+
Sbjct: 133 GSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVAFATPTIAQPGTWN- 191
Query: 472 LCSTYN-SDH 498
+C Y+ SDH
Sbjct: 192 VCGDYSYSDH 201
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 65.3 bits (152), Expect = 1e-12
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Frame = +1
Query: 145 IAAIVDGICFVSIYVPHP-SLQIFNEIKNFIS---VLPRPFMILGDFNSHHTSWGSSVSN 312
+ A+++ I F S Y P L+ F E+ IS P +I GDFN+ T WGS +N
Sbjct: 75 VIAVINKITFCSCYAPPRWDLEKFEEMLKRISDEVYDVNPIIISGDFNAWATEWGSKSTN 134
Query: 313 SYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNS 492
+ G +L+ +L ++N G + S IDL+ C+P LASS++W + S
Sbjct: 135 ARGNAVLEHFSRLNLVLVNVGFCPTFVRNSRT-SIIDLTFCSPALASSMNWRVSNAYTLS 193
Query: 493 DH 498
DH
Sbjct: 194 DH 195
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 64.5 bits (150), Expect = 2e-12
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Frame = +1
Query: 103 SSFPLPS--HSNCFSVIAAIVDGICFVSIYV----PHPSLQIFNEIKNFISVLPRPFMIL 264
SS+P+ S ++AA + GI F+S Y P + F + +I
Sbjct: 82 SSYPIQRVLRSAVPGIVAAQIGGIVFISCYARPRRPEEDYEGFLAAVQLEASTHSQVVID 141
Query: 265 GDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGS-PTRLTKPGEVISAIDLSICTP 441
GDFN+ HT WGS+ ++ G +LL ++ L ++NSG+ PT + + S ID+ TP
Sbjct: 142 GDFNAWHTEWGSARNSQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVIDVCFATP 201
Query: 442 QLASSLSWSTLCSTYNSDHYPIIIS 516
+A +W + SDH I S
Sbjct: 202 SIARPETWE-VHEFARSDHQLITYS 225
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 63.3 bits (147), Expect = 5e-12
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Frame = +1
Query: 142 VIAAIVDGICFVSIYVPHPSLQIFNEIKNFISVLPRP------FMILGDFNSHHTSWGSS 303
++AA V GI F+S+Y P PSL +E + + + ++ GDFN+ H WGS
Sbjct: 140 LVAAQVAGITFISVYAP-PSLSA-HEFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSG 197
Query: 304 VSNSYGYELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCS 480
+ G ELL ++ L ILN G PT + + S ID+S + ++ +WS +
Sbjct: 198 RNGQRGIELLQTVETLGLSILNQGRKPTFIGRGFAASSVIDVSFASREIVRPDTWSVIPF 257
Query: 481 TYNSDH 498
+ SDH
Sbjct: 258 S-RSDH 262
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 61.3 bits (142), Expect = 2e-11
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Frame = +1
Query: 142 VIAAIVDGICFVSIYV-PHPSLQIFNEIKNFISVLPR--PFMIL-GDFNSHHTSWGSSVS 309
++ A V+GI V YV P+ ++ F EI I +L R P ++L GDFN+ HT+WGS +
Sbjct: 75 IVVADVNGITIVYYYVKPNVGVRQFEEIMERIDILIRGHPRVLLAGDFNAWHTAWGSERT 134
Query: 310 NSYGYELLDILDMYSLCILNSGSPTRLTKPGEV-ISAIDL-----SICTPQLA--SSLSW 465
G LL +++ L +LN G+ G S ID+ SIC P LA S+ W
Sbjct: 135 KPKGIALLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRPDLAANSATCW 194
Query: 466 STLCSTYNSDH 498
L SDH
Sbjct: 195 RILSRYSYSDH 205
Score = 24.2 bits (50), Expect = 2.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1
Query: 458 REDANWGVQMDRSMALITS 402
+ + NW V D+S+A++TS
Sbjct: 40 QNNGNWVVDRDKSVAIVTS 58
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 60.9 bits (141), Expect = 3e-11
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Frame = +1
Query: 127 SNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNFISVLP-----RPFMIL-GDFNSHHT 288
S ++AA + G+ F+S Y P PSL + E + F+ + P +++ GDFN+ H
Sbjct: 83 SEAQGLVAAQIGGVVFISCYAP-PSLNLA-EFERFLEAIELEGFSHPQVVVAGDFNARHE 140
Query: 289 SWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVI-SAIDLSICTPQLASSLSW 465
WGS + G EL +++ L ++N G G + S +D++ +P +A +W
Sbjct: 141 EWGSPRTCDRGEELHGMVEQLGLIVINQGREYTFVGNGVALPSIVDVAFASPSIARPDTW 200
Query: 466 STLCSTYNSDH 498
S SDH
Sbjct: 201 VVSTSYTASDH 211
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 58.8 bits (136), Expect = 1e-10
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Frame = +1
Query: 142 VIAAIVDGICFVSIYVPHPSL--QIFNEIKNFISVLPRPF---MILGDFNSHHTSWGSSV 306
+IAA V GI F+S Y P PSL + F E I + + ++ GDFN+ H WGS
Sbjct: 134 LIAAKVGGITFLSCYAP-PSLSREGFAEFVEAIELEAQSHPQVVVAGDFNAWHEEWGSRR 192
Query: 307 SNSYGYELLDILDMYSLCILNSGSPTRLTKPG-EVISAIDLSICTPQLASSLSWSTLCST 483
SN G LL+ L ++N G+ G S +D++ + +A +W +
Sbjct: 193 SNERGEVLLEASQQLGLLLMNRGNVATFVGNGVATASVVDVTFASSSIAQPSTWLVRNTD 252
Query: 484 YNSDHYPIIIS 516
SDH I S
Sbjct: 253 TRSDHRYITYS 263
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 57.6 bits (133), Expect = 2e-10
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Frame = +1
Query: 127 SNCFSVIA-AIVDGICFVSIYVPHPS--LQIFNE-IKNFISVLP--RPFMILGDFNSHHT 288
SN F A V+G+ F S Y P PS L+ F+ + N ++ L RP +I GDFN+
Sbjct: 66 SNTFEGFCIAEVNGVFFCSCYAP-PSWELERFHVMLDNLVAELDGHRPLVIAGDFNAWAV 124
Query: 289 SWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWS 468
WGS +NS G +L+ + + N+G+ + + S +D++ C+ L+ L+W
Sbjct: 125 EWGSKRTNSRGDAVLESFARLGVTLGNAGTTPTFNR-NKRTSIVDITFCSTTLSERLNWR 183
Query: 469 TLCSTYNSDH 498
+ SDH
Sbjct: 184 VSDALTLSDH 193
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 56.4 bits (130), Expect = 6e-10
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Frame = +1
Query: 67 GVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYV-PHPSLQIFNEIKNFISVL 243
G +I +S T+ + S + + AA ++ + F+ YV P + F E+ I VL
Sbjct: 51 GKVAIIASSETYPVQQVVSVTQS-GIAAARINDVLFICCYVSPSAGVSEFEEVMQRIDVL 109
Query: 244 PR--PFMIL-GDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSG-SPTRLTKPGEVI 411
R P ++ GD N+ HT+WGS +N+ G ++ ++D L +LN+G +PT L
Sbjct: 110 ARGHPRVVFAGDLNAWHTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGTAPTFLGNGVARP 169
Query: 412 SAIDLSICTPQLA 450
S +D++ + +A
Sbjct: 170 SVVDVAFASSSIA 182
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 53.2 bits (122), Expect = 5e-09
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Frame = +1
Query: 142 VIAAIVDGICFVSIYVPHP-SLQIFNEIKNFISVL---PRPFMILGDFNSHHTSWGSSVS 309
++A V GI VS Y P ++Q F E+ + I + F++ GDFN+ +SW +++
Sbjct: 75 MLAVEVGGILIVSAYAPPSWTVQEFEELLDNIVLTVSGSSKFVVAGDFNAWSSSWANTLG 134
Query: 310 ------NSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWST 471
G LL + ++N+G T +T E SAIDL+ + L + W
Sbjct: 135 ARGESQRLRGDTLLAAFAGLEMVLMNNGQDTFVTP--ERKSAIDLTFVSQSLMETTGWEV 192
Query: 472 LCSTYNSDHYPIIIS 516
L NSDH I+I+
Sbjct: 193 LPDYMNSDHIGILIT 207
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 52.4 bits (120), Expect = 9e-09
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 124 HSNCFSVIAAIVDGICFVSIYV-PHPSLQIFNEIKNFISVLPRP---FMILGDFNSHHTS 291
H V+AA V G VS YV P + F I I ++ R ++ GDFN+ H
Sbjct: 70 HRQTLGVVAADVGGTTIVSCYVSPQTGVPEFRSIMEKIDLIVRGCSRVLLAGDFNAMHLD 129
Query: 292 WGSSVSNSYGYELLDILDMYSLCILN 369
WGSS + G ELL + D L +LN
Sbjct: 130 WGSSRTCPKGLELLQLADNLGLVLLN 155
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 46.8 bits (106), Expect = 5e-07
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Frame = +1
Query: 175 VSIYVPHP-SLQIFN-EIKNFISVLP--RPFMILGDFNSHHTSWGSSVSNS------YGY 324
VS+Y P S++ F + N + + F+I GDFN+ SW + + G
Sbjct: 84 VSVYAPPRFSMEEFQIMLDNTVMAVTGIHKFVIGGDFNAWSASWNNQLGERGETQKRRGE 143
Query: 325 ELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYP 504
+L +LN GS PG S +DL+ + +A S W L S NSDH
Sbjct: 144 LVLSTFAQIDAILLNDGSTPTYVGPGRT-SVVDLTFASRTVARSFKWEVLSSYMNSDHRA 202
Query: 505 III 513
I I
Sbjct: 203 IRI 205
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 38.3 bits (85), Expect = 2e-04
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 13/128 (10%)
Frame = +1
Query: 163 GICFVSIYVPHPSLQI-FNEIKN----FISVLPR--PFMILGDFNSHHTSWG------SS 303
GI F S+Y+P + E K +S+LPR +I G N +WG
Sbjct: 82 GIVFCSVYLPPVGSDLTVEEYKRKWTEIVSMLPRNRDTVIGGYVNVWSGAWGMERRPNDG 141
Query: 304 VSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCST 483
S G ++D L +LN G+ + S +D+S C+P L +W +C
Sbjct: 142 ERVSRGGVVMDAAAALGLVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNW-RVCDE 200
Query: 484 YNSDHYPI 507
SDH I
Sbjct: 201 TPSDHNTI 208
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.4 bits (48), Expect = 4.9
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 13/109 (11%)
Frame = +1
Query: 28 YSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVD----GICFVSIYVPH 195
Y C R G +L+ S+ + S LPS I V + + +Y+P
Sbjct: 133 YRCDRSLSGSSSRGGGVLLAVSNAYESIELPSRDRSLEYICVRVACNNAHLYVMVVYIPP 192
Query: 196 P------SLQIFNEIKNFISVLPRP---FMILGDFNSHHTSWGSSVSNS 315
+L+ ++ + ++ +P ++GDFN SW ++ +S
Sbjct: 193 QLSSEISTLRSLHDCISSFTLRLKPSDLLFVIGDFNQPSISWSTADPSS 241
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,263
Number of Sequences: 2352
Number of extensions: 11018
Number of successful extensions: 45
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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