Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i05f
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    26   0.26 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.26 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.26 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   3.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.5  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 317 IKNFISVLPRPFMILGDFNSHHTSW 243
           I  ++  +P P M L DF SH  +W
Sbjct: 195 IPPYLFFVPPPLMFLQDFLSHQHAW 219


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 317 IKNFISVLPRPFMILGDFNSHHTSW 243
           I  ++  +P P M L DF SH  +W
Sbjct: 428 IPPYLFFVPPPLMFLQDFLSHQHAW 452


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 317 IKNFISVLPRPFMILGDFNSHHTSW 243
           I  ++  +P P M L DF SH  +W
Sbjct: 428 IPPYLFFVPPPLMFLQDFLSHQHAW 452


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 400 KQLLCEGRGKEEKVLEFLMSRHTPP 474
           K L+CE  G+ E  L    S  TPP
Sbjct: 187 KNLICEIDGRHEFFLAEFKSAKTPP 211


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -3

Query: 215 YELLDILDMYSLCILN 168
           +E++D ++M+SL ILN
Sbjct: 675 HEIIDKIEMFSLQILN 690



 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -3

Query: 215 YELLDILDMYSLCILN 168
           +E++D ++M+SL ILN
Sbjct: 951 HEIIDKIEMFSLQILN 966



 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -3

Query: 215  YELLDILDMYSLCILN 168
            +E++D ++M+SL ILN
Sbjct: 1053 HEIIDKIEMFSLQILN 1068


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -3

Query: 215 YELLDILDMYSLCILN 168
           +E++D ++M+SL ILN
Sbjct: 334 HEIIDKIEMFSLQILN 349


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 455 IRNSSTFSSFPLPSHSNCFSVI 390
           IRN  T   F LP+  NC   +
Sbjct: 10  IRNRGTPPKFELPTTHNCLKKV 31


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross
          protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 65 LCSTYNSDHYPI 30
          + S YN+D YPI
Sbjct: 5  MVSVYNNDFYPI 16


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 287 PFMILGDFNSHHTSW 243
           P + L DF SH  +W
Sbjct: 451 PVVFLNDFISHQHAW 465


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 287 PFMILGDFNSHHTSW 243
           P + L DF SH  +W
Sbjct: 451 PVVFLNDFISHQHAW 465


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 287 PFMILGDFNSHHTSW 243
           P + L DF SH  +W
Sbjct: 451 PVVFLNDFISHQHAW 465


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 287 PFMILGDFNSHHTSW 243
           P + L DF SH  +W
Sbjct: 451 PVVFLNDFISHQHAW 465


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 86  SSLSWSTLCSTYNSDHYPI 30
           +SLSW+  CS  ++   P+
Sbjct: 175 NSLSWNNPCSINSTSSQPV 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,096
Number of Sequences: 336
Number of extensions: 2748
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)