Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12i05f
(574 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF277379-1|AAF78764.1| 989|Homo sapiens vitamin D receptor-inte... 32 1.2
BC035350-1|AAH35350.1| 524|Homo sapiens cytochrome P450, family... 31 2.2
AC004523-1|AAC11543.1| 458|Homo sapiens F22329_1 protein. 31 2.2
AY358977-1|AAQ89336.1| 524|Homo sapiens CYP4F12 protein. 31 3.8
AY008841-1|AAG33247.1| 524|Homo sapiens cytochrome P450 isoform... 31 3.8
AB035131-1|BAB18270.1| 524|Homo sapiens cytochrome P450 protein. 31 3.8
AB035130-1|BAB18269.1| 524|Homo sapiens cytochrome P450 protein. 31 3.8
D50920-1|BAA09479.2| 1006|Homo sapiens KIAA0130 protein. 29 8.8
BC011375-1|AAH11375.1| 989|Homo sapiens THRAP4 protein protein. 29 8.8
AF055995-1|AAC39855.1| 989|Homo sapiens thyroid hormone recepto... 29 8.8
>AF277379-1|AAF78764.1| 989|Homo sapiens vitamin D
receptor-interacting protein complex component DRIP100
protein.
Length = 989
Score = 32.3 bits (70), Expect = 1.2
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -3
Query: 572 PFIFSLSETWLKPDFVFKIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSV 393
PF + +T + + P + C R D G + L+ NSS + H C S+
Sbjct: 523 PFFETWMQTCMPEEGKILNPDHPCFRPDSTK-VGSLVALLNNSSEMKLVQMKWHEACLSI 581
Query: 392 IAAIVD 375
AAI++
Sbjct: 582 SAAILE 587
>BC035350-1|AAH35350.1| 524|Homo sapiens cytochrome P450, family 4,
subfamily F, polypeptide 12 protein.
Length = 524
Score = 31.5 bits (68), Expect = 2.2
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 326 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 147
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 157 FNILKSYITIFNKSANIMLDKWQHLASEGSSCLDMFEHISLMTLDSLQKCIFSFDSHCQ- 215
Query: 146 TKPGEVISAI 117
+P E I+ I
Sbjct: 216 ERPSEYIATI 225
>AC004523-1|AAC11543.1| 458|Homo sapiens F22329_1 protein.
Length = 458
Score = 31.5 bits (68), Expect = 2.2
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 326 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 147
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 91 FNILKSYITIFNKSANIMLDKWQHLASEGSSCLDMFEHISLMTLDSLQKCIFSFDSHCQ- 149
Query: 146 TKPGEVISAI 117
+P E I+ I
Sbjct: 150 ERPSEYIATI 159
>AY358977-1|AAQ89336.1| 524|Homo sapiens CYP4F12 protein.
Length = 524
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 326 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 147
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 157 FNILKSYITIFNKSANIMLDKWQHLASEGSSRLDMFEHISLMTLDSLQKCIFSFDSHCQ- 215
Query: 146 TKPGEVISAI 117
+P E I+ I
Sbjct: 216 ERPSEYIATI 225
>AY008841-1|AAG33247.1| 524|Homo sapiens cytochrome P450 isoform
4F12 protein.
Length = 524
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 326 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 147
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 157 FNILKSYITIFNKSANIMLDKWQHLASEGSSRLDMFEHISLMTLDSLQKCIFSFDSHCQ- 215
Query: 146 TKPGEVISAI 117
+P E I+ I
Sbjct: 216 ERPSEYIATI 225
>AB035131-1|BAB18270.1| 524|Homo sapiens cytochrome P450 protein.
Length = 524
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 326 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 147
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 157 FNILKSYITIFNKSANIMLDKWQHLASEGSSRLDMFEHISLMTLDSLQKCIFSFDSHCQ- 215
Query: 146 TKPGEVISAI 117
+P E I+ I
Sbjct: 216 ERPSEYIATI 225
>AB035130-1|BAB18269.1| 524|Homo sapiens cytochrome P450 protein.
Length = 524
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 326 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 147
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 157 FNILKSYITIFNKSANIMLDKWQHLASEGSSRLDMFEHISLMTLDSLQKCIFSFDSHCQ- 215
Query: 146 TKPGEVISAI 117
+P E I+ I
Sbjct: 216 ERPSEYIATI 225
>D50920-1|BAA09479.2| 1006|Homo sapiens KIAA0130 protein.
Length = 1006
Score = 29.5 bits (63), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = -3
Query: 572 PFIFSLSETWLKPDFVFKIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSV 393
PF + +T + + P + C R D V LL NSS + H C S+
Sbjct: 540 PFFETWMQTCMPEEGKILNPDHPCFRPDSTKVESLVALL-NNSSEMKLVQMKWHEACLSI 598
Query: 392 IAAIVD 375
AAI++
Sbjct: 599 SAAILE 604
>BC011375-1|AAH11375.1| 989|Homo sapiens THRAP4 protein protein.
Length = 989
Score = 29.5 bits (63), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = -3
Query: 572 PFIFSLSETWLKPDFVFKIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSV 393
PF + +T + + P + C R D V LL NSS + H C S+
Sbjct: 523 PFFETWMQTCMPEEGKILNPDHPCFRPDSTKVESLVALL-NNSSEMKLVQMKWHEACLSI 581
Query: 392 IAAIVD 375
AAI++
Sbjct: 582 SAAILE 587
>AF055995-1|AAC39855.1| 989|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP100
protein.
Length = 989
Score = 29.5 bits (63), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = -3
Query: 572 PFIFSLSETWLKPDFVFKIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSV 393
PF + +T + + P + C R D V LL NSS + H C S+
Sbjct: 523 PFFETWMQTCMPEEGKILNPDHPCFRPDSTKVESLVALL-NNSSEMKLVQMKWHEACLSI 581
Query: 392 IAAIVD 375
AAI++
Sbjct: 582 SAAILE 587
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,163,931
Number of Sequences: 237096
Number of extensions: 1701166
Number of successful extensions: 2571
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2571
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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