Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i04r
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.8  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +1

Query: 343 ITHYVVICYLTQPITTQQNLHLINL-FI---IYRIKN 441
           + H V  CY  Q I  QQ+   INL F+   + R+KN
Sbjct: 110 VLHVVKQCYHLQKINVQQSGIFINLPFLEHNLIRLKN 146


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 94  RFSKSITITNIFYILLG 144
           +F K +TI  +F+++LG
Sbjct: 58  KFLKVVTIITVFFVVLG 74


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 94  RFSKSITITNIFYILLG 144
           +F K +TI  +F+++LG
Sbjct: 58  KFLKVVTIITVFFVVLG 74


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +1

Query: 586 FVFNNIHIIFLI 621
           F+F N+H++FL+
Sbjct: 186 FIFFNMHLLFLL 197


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 226 HFYWSNPILL*RFYC 182
           +FYWS  +L+ R  C
Sbjct: 319 YFYWSFALLITRIVC 333


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 455 FNWFLFFIL*IMNKLIRCKFCCVVI 381
           + W + + L  M++++  +FC  V+
Sbjct: 165 YRWIVLYTLSKMSQVMLIQFCAFVV 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,914
Number of Sequences: 336
Number of extensions: 3133
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)