Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i03r
         (673 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O15997 Cluster: BmP109; n=1; Bombyx mori|Rep: BmP109 - ...    74   4e-12
UniRef50_A0CCV8 Cluster: Chromosome undetermined scaffold_169, w...    34   3.6  
UniRef50_UPI00004D9DE5 Cluster: UPI00004D9DE5 related cluster; n...    33   4.8  
UniRef50_Q22RW3 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q2FLX0 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_A5KBU5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  

>UniRef50_O15997 Cluster: BmP109; n=1; Bombyx mori|Rep: BmP109 -
            Bombyx mori (Silk moth)
          Length = 965

 Score = 73.7 bits (173), Expect = 4e-12
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = -1

Query: 673  IEEFGAKGVCQRIGFCGRTETAYVRMYREKRN 578
            IEEFGAKGVCQRIGFCGRTETAYVRMYREKRN
Sbjct: 934  IEEFGAKGVCQRIGFCGRTETAYVRMYREKRN 965


>UniRef50_A0CCV8 Cluster: Chromosome undetermined scaffold_169,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_169,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 444

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 30/112 (26%), Positives = 50/112 (44%)
 Frame = -1

Query: 532 VISSCNVCNPSFFFYQKCLFLSLFFFMIDQHNFVTIINNNKKLYQKCTYSWK*TYHFSLY 353
           +++SC+   PS FF +K      F   I Q+N    IN +K++ + C+     T H  + 
Sbjct: 326 ILTSCSEVFPSIFFEEK------FCLAIQQNNLYR-INYDKEIIKLCS-----TKHNIIS 373

Query: 352 VAYYLI*NNQTKQ*YNVNE**LFFLSYIFYSNTGLFYHNTYSPIEIGC*KFF 197
            AYY+   N  K+ Y  +     +  Y+ Y N   FY+       I C  ++
Sbjct: 374 CAYYI---NDEKKKYEFHLLQDNYKIYLCYQNKDKFYNKERLQQSISCVSYY 422


>UniRef50_UPI00004D9DE5 Cluster: UPI00004D9DE5 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00004D9DE5 UniRef100 entry -
           Xenopus tropicalis
          Length = 417

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
 Frame = -1

Query: 523 SCNVCNPSF----FFYQKCLFLSLFFFMIDQHNFVTIINNNKKLYQKCTYSWK*TYHFSL 356
           S N  NP++    +    C   ++++F+I  ++     N+  K +  C Y+ K   H ++
Sbjct: 163 SINYHNPTYKHHYYHSHNCKHSNIYYFIIHNNSSFNYCNSTHKHHFCCPYNCK---HSNI 219

Query: 355 YVAYYLI*NN-QTKQ*YNVNE**LFFLSYIFYSNTGLFYHN-TY 230
           Y  Y+ I NN      Y+ N    ++  +I ++N  + YHN TY
Sbjct: 220 Y--YFSIHNNCGCFNYYSSNHKHHYYHPHIIHNNCSINYHNPTY 261


>UniRef50_Q22RW3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 72

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = -1

Query: 535 SVISSCNVCNPSFFFYQKCLFLSLFFFMIDQHNFVTIINNNKKLYQK 395
           +VISSC+     F   QK +F+  ++F  D  NF+ IIN N+ L+ K
Sbjct: 5   AVISSCSFIQ--FSMKQK-IFIYYYYFQSDLDNFICIINQNEILHIK 48


>UniRef50_Q2FLX0 Cluster: Putative uncharacterized protein; n=1;
           Methanospirillum hungatei JF-1|Rep: Putative
           uncharacterized protein - Methanospirillum hungatei
           (strain JF-1 / DSM 864)
          Length = 159

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -3

Query: 656 EGRLPEDRILWSDRNRIRAHVPREEELTRTCSIYNITIDRIGN 528
           E RLPED +   D   IR+ + R+E +++   I+N+T  R GN
Sbjct: 7   EKRLPEDILASIDEEAIRSGITRQEAVSKL--IHNVTAQRNGN 47


>UniRef50_A5KBU5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 562

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -1

Query: 448 DQHNFVTIINNNKKLYQKCTYSWK*TYHFSLY 353
           D+HNFVT++ NN K+Y+K     +  + FSLY
Sbjct: 208 DKHNFVTVLFNNLKVYEKSQLHHE--FCFSLY 237


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,105,557
Number of Sequences: 1657284
Number of extensions: 11195109
Number of successful extensions: 24763
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24751
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)