Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12h24r
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 52 3e-07
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 48 5e-06
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 43 2e-04
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 39 0.003
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 32 0.38
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.38
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 32 0.38
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 30 1.5
Z83236-8|CAE17881.1| 321|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical... 28 4.7
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 27 8.2
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 52.4 bits (120), Expect = 3e-07
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 3/150 (2%)
Frame = -1
Query: 553 DIALVKLNHH-IPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNGGVASEILL 377
DIA++++ + I ++ Y QP L + + + G VSG+G G+ L
Sbjct: 117 DIAILEIPYPGIEFNEYAQPICLPSKDF--VYTPGRQCVVSGWGSM------GLRYAERL 168
Query: 376 WVHLRGITNE-QCLTHYPNSRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTIVDEDGQPTM 200
L I N C+ + + CA Y + SCQGDSGGP EDG +
Sbjct: 169 QAALIPIINRFDCVNSSQIYSSMSRSAFCAGYL-EGGIDSCQGDSGGPFACRREDGAFVL 227
Query: 199 VGVVSFGHRDGC-NSPHPSAYVRPGHYHDW 113
GV+S+G DGC P Y Y W
Sbjct: 228 AGVISWG--DGCAQKKQPGIYTMVAPYLSW 255
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 48.0 bits (109), Expect = 5e-06
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Frame = -1
Query: 598 IHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRT 419
IHP Y +G + D A+++++ + S +P L + E + V+G+G T
Sbjct: 132 IHPWYN--IGFPSSYDFAIMRIHPPVNTSTTARPICLPSLPA----VENRLCVVTGWGST 185
Query: 418 DDPWNGGVASEILLWVHLRGITNEQCLTHYPN--SRVIQKQTLCAAYYNDTAQSSCQGDS 245
+ +++ L +H+ ++ C + PN R+ LCA Y S CQGDS
Sbjct: 186 IE--GSSLSAPTLREIHVPLLSTLFC-SSLPNYIGRIHLPSMLCAGYSYGKIDS-CQGDS 241
Query: 244 GGPLTIVDEDGQPTMVGVVSFGHRDGCNSP-HPSAY 140
GGPL + DG + GVVS+G GC P P Y
Sbjct: 242 GGPL-MCARDGHWELTGVVSWG--IGCARPGMPGVY 274
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 220 EDGQPTMVGVVSFGHRDGCNSPHPSAYVRPGHYHDWFYEVTGINFDWSSEDLKPIV 53
+D +PT V GHR G SPH V H W+ ++D++ + P V
Sbjct: 103 KDRRPTSYSVRVGGHRSGSGSPHRVTAV---SIHPWYNIGFPSSYDFAIMRIHPPV 155
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 43.2 bits (97), Expect = 2e-04
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Frame = -1
Query: 556 DDIALVKLNHHIPYSRYIQPCRLQNSEQKNIN-YEGAIFTVSGYGRTDDPWNGG----VA 392
+DIAL++++ + I+P L + + K + Y+ + V GYG T + G +
Sbjct: 123 NDIALLRISSDLS-KLGIKPVCLVHDDSKLLKQYKNGV--VIGYGLTLGEDSSGEPKLIN 179
Query: 391 SEILLWVHLRGITNEQCLTHYP-----NSRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTI 227
S+ L + I+++ C+ + + ++ Q AY + TA GDSGGPL I
Sbjct: 180 SQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHGTAP----GDSGGPLLI 235
Query: 226 VDEDGQPTMVGVVSFG--HRDGC--NSPHPSAYVRPGHYHDWFYEVTG 95
+G+ +G+ S+G DG P Y R Y W V G
Sbjct: 236 HKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQGVIG 283
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 280 NDTAQSSCQGDSGGPLTIVDED-GQPTMVGVVSFGHRDGCNSPHPSAYVRPGHYHDWFYE 104
N +A +C GDSGG L D++ G+ ++ + SFG R GC S + + R Y +
Sbjct: 228 NYSAPRTCHGDSGGGLEYRDDNYGRAFLIAITSFGTR-GCPSNMLARFTRVDMYLNLICN 286
Query: 103 VTGI 92
TG+
Sbjct: 287 YTGV 290
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 253 GDSGGPLTIVDEDGQPTMVGVVSFGHRDGCN 161
GD + IVDE G+PT G+V F + CN
Sbjct: 213 GDVERAVHIVDEKGRPTGEGIVEFERKPNCN 243
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 253 GDSGGPLTIVDEDGQPTMVGVVSFGHRDGCN 161
GD + IVDE G+PT G+V F + CN
Sbjct: 213 GDVERAVHIVDEKGRPTGEGIVEFERKPNCN 243
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 31.9 bits (69), Expect = 0.38
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Frame = -1
Query: 562 QTDDIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNG--GVAS 389
Q +DI +++L I L + NI GA T G+G DP G A
Sbjct: 174 QGNDIVILELESTIDDVEGANYACLPFLPEVNIQ-SGANVTSFGWG--SDPGKGFDNAAF 230
Query: 388 EILLWVHLRGITNEQCLTHYPNSRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTIVDED-G 212
++ + L T C ++ S I + C A D ++ C GDSGG LT D
Sbjct: 231 PMIQVLTLATETLATCEENWGTS--IPFDSFCTAEEED--KNVCSGDSGGGLTFHQSDSA 286
Query: 211 QPTMVGVVSFG 179
+ ++ +VS+G
Sbjct: 287 REFIIAIVSYG 297
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = -1
Query: 433 GYGRTDDPWNGGVASEILLWVHLRGITNEQCLTHYPNSRVIQKQTLCAAYYNDTAQSSCQ 254
G GRTDD WN +++++ + +E +++ ++ V QK++ A+ N +Q+ C
Sbjct: 49 GQGRTDDAWNE------VVFLNDKKFKSELLVSN--SATVRQKRSDLPAHCNCLSQNQCP 100
Query: 253 GDSGGPLTIVDEDGQP 206
GP DG+P
Sbjct: 101 PGPPGPPGPAGMDGKP 116
>Z83236-8|CAE17881.1| 321|Caenorhabditis elegans Hypothetical
protein K10H10.10 protein.
Length = 321
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 452 CNLHRERLRTYR*SMERWRGVRNPVVGASAWYHQRAVSDPLPEQP 318
C HRER R R++ V Y +R ++PLP +P
Sbjct: 214 CKKHRERFRYVCPDPLRFQSFAENAVDFCVRYQERCPNEPLPAEP 258
>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
protein Y110A7A.16 protein.
Length = 1250
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = -1
Query: 487 QNSEQKNINY--EGAIFTVSGYGRTDDPWNGGVAS---EILLWVHLRGITNEQCLTHYPN 323
Q+S + ++++ +G I VS Y +D N V EIL +++R I C H PN
Sbjct: 185 QHSRKTSVHWRWDGEIVAVSFYSSQNDTRNLTVFDRNGEILNNMNIRNIYLSHCFAHKPN 244
Query: 322 SRVI 311
+ ++
Sbjct: 245 ANLL 248
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 313 IQKQTLCAAYYNDTAQSSCQGDS 245
+Q+QT+CAA + QSSC ++
Sbjct: 331 VQQQTICAAACQPSCQSSCSSNA 353
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,766,566
Number of Sequences: 27780
Number of extensions: 287717
Number of successful extensions: 832
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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