Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12h24f
(573 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 48 4e-06
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 47 1e-05
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 44 9e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 42 4e-04
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 42 4e-04
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 41 8e-04
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.001
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 37 0.010
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 36 0.023
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.023
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.023
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.041
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.041
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.041
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.041
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 34 0.072
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.095
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 33 0.13
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 33 0.13
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.17
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 32 0.29
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 31 0.51
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.88
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 30 1.2
SB_47891| Best HMM Match : RVT_1 (HMM E-Value=1.3e-09) 29 2.7
SB_56201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_50535| Best HMM Match : PPE (HMM E-Value=1.1) 28 4.7
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_28643| Best HMM Match : COX_ARM (HMM E-Value=3.3) 28 4.7
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 28 6.2
SB_48215| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 27 8.2
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 27 8.2
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 27 8.2
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 48.4 bits (110), Expect = 4e-06
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Frame = +3
Query: 135 QSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXX-XXXIIHHEWVLTAAHCLA---NRINF 302
QSR++ G A P QISLRM +I EWVLTAAHC+A N +
Sbjct: 35 QSRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAGIRNPRRY 94
Query: 303 VVRLG---LTNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPC 473
V +G L T+ + + + + H +Y L T D+AL+KL+ S+ P
Sbjct: 95 SVYVGAHELDGTTQVEEKISISKIYSHEKYSSSL---LTSDVALIKLSKAYRVSK-SNPA 150
Query: 474 RLQNSEQKN 500
+ S +N
Sbjct: 151 KQAESNYRN 159
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Frame = +3
Query: 135 QSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANR---INFV 305
+ R+V+G E P Q+ L +I EWV+TAAHC+ ++
Sbjct: 41 EKRVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHCVFQEPDVSHYK 100
Query: 306 VRLG-----LTNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQP 470
V LG + T ++ V T H +H R++ G DIAL+KL+ + +++
Sbjct: 101 VILGDFNRDIKEPTEQEFDVSTLH--LHQRFLTDKG--YGYDIALLKLSRPAVINEFVRT 156
Query: 471 CRLQNSEQKNINYEGAIFTVSGYGRTD 551
L + + EG + ++G+G+T+
Sbjct: 157 VCLPAQGSRAL--EGTMCFITGWGKTN 181
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRI---NFVV 308
SRI+ G A P Q + + +I EWV+TAAHC+ I N+ +
Sbjct: 283 SRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCVFQNIEPSNYKI 342
Query: 309 RLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRLQNS 488
+LG + + + IH + G DIA++KL + P I P L
Sbjct: 343 KLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIMKLANPAPIGHTISPACLPGL 402
Query: 489 EQKNINYEGAIFTVSGYGRTD 551
+ + G + V+G+G T+
Sbjct: 403 YDQVTS--GTMCYVTGWGMTE 421
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Frame = +3
Query: 243 IIHHEWVLTAAHCLAN-------RINFVVRLGLTNLTRPD----YLVETTHKFIHPRYIE 389
+I +WVLTAAHC+ + R F V+LGL T P+ L + HP++
Sbjct: 137 LISEKWVLTAAHCVTHRNGNILPRSRFQVQLGLYRTTLPNEPQVQLRNISEIRTHPQFDH 196
Query: 390 ILGGVQTDDIALVKLNHHIPYSRYIQP-CRLQNSEQKNINYEGAIFTVSGYGRT 548
+L D+AL+KL+ S Y++P C + +Q ++ G+G+T
Sbjct: 197 VLFDA---DLALIKLDGEAIISEYVRPICLPETDDQASLISPSKFGMAVGWGKT 247
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 45.6 bits (103), Expect = 3e-05
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANR--INFVVR 311
+RIV G A+ P Q LR +IH +WVLTA HC+++R + +R
Sbjct: 662 TRIVGGTAAKQGDWPWQAQLR---STSGFPFCGGSLIHPQWVLTATHCVSSRRPTDLNIR 718
Query: 312 LGLTNLTRPDYLVETTHK----FIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRL 479
LG N R + +E K +HP Y + +G DIAL+KL +R+
Sbjct: 719 LGAHN-RRANLGMEQDIKVEKIIMHPGYRKPVG--LAHDIALIKLLKPANLNRFPTSTTS 775
Query: 480 QNSEQKNI 503
+ +Q NI
Sbjct: 776 ASVDQTNI 783
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +3
Query: 243 IIHHEWVLTAAHCLA---NRINFVVRLGLTNLTRPDYLVETTHK----FIHPRYIEILGG 401
++ WV+TAAHC+A + ++ V G P+ E TH HP Y
Sbjct: 97 LVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEG-TEQTHDVKRIITHPTY---NSP 152
Query: 402 VQTDDIALVKLNHHIPYS 455
++DIAL++L+ +P S
Sbjct: 153 QLSNDIALIELSSPVPLS 170
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 44.0 bits (99), Expect = 9e-05
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Frame = +3
Query: 141 RIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCL----ANRINFVV 308
RIV G A+ P Q L+ +I+ EWV+TAAHC+ +R VV
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDTIVCGGS--LINREWVVTAAHCIDRNNPSRTGCVV 489
Query: 309 R-------LGLTNLTR---PDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHI-PYS 455
LG +++T+ + + IHP Y EI T+D+AL++L I ++
Sbjct: 490 PDPPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHEI---KLTNDLALIRLRTPITTFT 546
Query: 456 RYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDD 554
++++P L S ++ G TV+GYGR +
Sbjct: 547 KHVRPVCLPTSATPDLAV-GTNCTVTGYGRVGE 578
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 44.0 bits (99), Expect = 9e-05
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Frame = +3
Query: 144 IVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANR--INFVVRLG 317
I+ G AE + P Q+S+++ +I WVLTAAHC+ + N + +G
Sbjct: 546 IMGGANAEHGEWPWQVSMKLNSSSLPHICGGN-VISPWWVLTAAHCVQDERASNIKLTMG 604
Query: 318 ---LTNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRLQNS 488
L N+ + ++ H Y D AL+KL + +++Y+QP L +S
Sbjct: 605 EWRLFNVDGTEQVIPVERIISHANYSY---NTVDYDYALLKLTRPLNFTQYVQPVCLPDS 661
Query: 489 EQKNINYEGAIFTVSGYGRTD 551
+ G + V+G+G T+
Sbjct: 662 DFP----AGTLCYVTGWGSTN 678
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 41.9 bits (94), Expect = 4e-04
Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANR--INFVVR 311
SRIV G A P Q LR +IH WVLTAAHC++++ VVR
Sbjct: 389 SRIVGGAAANPGDWPWQAQLR---TTTGFPYCGGSLIHSNWVLTAAHCISSKRPAEVVVR 445
Query: 312 LG----LTNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKL 434
LG L +LT ++ + H Y +DIAL+KL
Sbjct: 446 LGAHSRLGSLTTDMQDIKVSAIITHSNY---NSRTMYNDIALLKL 487
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 41.9 bits (94), Expect = 4e-04
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANR--INFVVR 311
+RIV G A+ P Q LR +I +W+LTA HC+ + + V+R
Sbjct: 9 TRIVGGTAAKHGDWPWQAQLR---TTSGFPYCGGSLIAPQWILTATHCVERKQASSIVIR 65
Query: 312 LG-----LTNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYS 455
LG T T DY+V T HP Y + + DIAL+KL+ + Y+
Sbjct: 66 LGARRRVATVGTEKDYIV--TKVITHPSYHK--PKTYSHDIALLKLDKPVLYT 114
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 41.5 bits (93), Expect = 5e-04
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCL-----ANRINF 302
SRIV G A + P Q L ++H +WV+TA+HC+ +
Sbjct: 209 SRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDYKTH 268
Query: 303 VVRLG---LTNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPC 473
++ LG T + + + ++H Y + +D+AL++L +RY+QP
Sbjct: 269 IISLGGHNKTGIMSVEQRIGIAKIYLHADY-NLYPHQYNNDVALIRLAKPAIRTRYVQPV 327
Query: 474 RLQNSEQKNINY-EGAIFTVSGYGR 545
L + +++ G ++G+GR
Sbjct: 328 CLADG---TVSFPPGTECWITGWGR 349
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 41.5 bits (93), Expect = 5e-04
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXX--XXIIHHEWVLTAAHCLA---NRINF 302
+RIV G A+ P QIS+ ++ EW++TAAHC A + ++
Sbjct: 102 TRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDAKDY 161
Query: 303 VVRLGLTNLTRPD---YLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPC 473
+ +G +L D + +HP+Y D+AL+KL + Y+ ++P
Sbjct: 162 TIAVGEHDLNATDGYEQRPDVERIILHPKYAP--HNNHDYDVALIKLASPLQYNDRVRPV 219
Query: 474 RLQNSEQKNINYEGAIFTVSGYGRTDDPWNG 566
L S ++++ E +SG+G + +G
Sbjct: 220 CLP-SLKEDLE-ENTQCYISGWGHLQEAGHG 248
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 40.7 bits (91), Expect = 8e-04
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Frame = +3
Query: 132 RQSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCL-----ANRI 296
R R+V G A+ Q P QI+L ++H WV+T AHC +
Sbjct: 25 RFRRVVGGDEAKAGQFPWQIALLFKRQQYCGGA----LVHERWVVTGAHCFNPYTSEDPR 80
Query: 297 NFVVRLGLTNLTRPDYLVE-------TTHKFIHPRYIE-ILGGVQTDDIALVKLNHHIPY 452
++ V LG NL + + T H+ + E I DIAL++L+ + +
Sbjct: 81 DWNVTLGEYNLAVNESFEQRRGVKSITVHEHYKSMWFEGITDTPPMFDIALIELDRPVVF 140
Query: 453 SRYIQPCRLQNSEQKNINYE-GAIFTVSGYGRTDDPWNG 566
+ ++QP + + NI+++ +SG+G T WNG
Sbjct: 141 NFHVQPICIM---RPNISFKWNTACFISGWGHT--RWNG 174
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 40.3 bits (90), Expect = 0.001
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLA--NRINFVVR 311
SRIV G A P Q+ M ++ EWV+TAAHC+ N + VR
Sbjct: 629 SRIVGGSTAPPGAWPWQV---MLIYNSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQVR 685
Query: 312 LGLTNLTRPDYLVE--TTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRLQN 485
LG + T PD VE + + IH ++DIAL++L+ + I + N
Sbjct: 686 LGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPN 745
Query: 486 SEQKNINYEGAIFTVSGYG 542
N G + ++G+G
Sbjct: 746 DTVHFPN--GTMCYITGWG 762
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 39.9 bits (89), Expect = 0.001
Identities = 46/156 (29%), Positives = 62/156 (39%), Gaps = 14/156 (8%)
Frame = +3
Query: 123 NTDRQSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRINF 302
N Q RIV G A P Q+ L + +I +WV+T+ HC R
Sbjct: 243 NNKPQPRIVGGREASPNSWPWQVDLVVNGTRHNCGGS---LIDKQWVVTSGHCFDQRPYA 299
Query: 303 VVRLGLTNLTRPDYLVETTH----------KFIHPRYIEILGGVQTD---DIALVKLNH- 440
+ L ++ TT FIHP+Y LGG+ DIALVKL
Sbjct: 300 YIPLSYYEFRLGEHRESTTEGWEEIIKGEKLFIHPKY--KLGGLDYTGDYDIALVKLKRP 357
Query: 441 HIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRT 548
+ Y R C + S +GA V+G+GRT
Sbjct: 358 AVFYKRVHSVCLPEKSWSPP---DGAGCYVTGWGRT 390
Score = 29.9 bits (64), Expect = 1.5
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Frame = +3
Query: 243 IIHHEWVLTAAHCL--ANRIN--FVVRLGLTNLTR---PDYLVETTHKFIHP-RYIEILG 398
+I W+LT++HC N I+ F +RLG + R + +++ +IHP + L
Sbjct: 19 LIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEIIQGDQLYIHPGLVVGDLI 78
Query: 399 GVQTDDIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRT 548
D+AL+KL + + + L S N+ G V+G+G+T
Sbjct: 79 SPGDYDVALIKLKRPAVFHKRVHSVCLP-SVTANLT-TGTKCFVTGWGKT 126
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 13/154 (8%)
Frame = +3
Query: 132 RQSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXX--XXIIHHEWVLTAAHCLANRINFV 305
++ RI G + P Q++L +I +WVLTAAHC+ + + +
Sbjct: 1157 KRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCVVYKDSGI 1216
Query: 306 ------VRLGLTNLTRPD-----YLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPY 452
V LG+ ++T ++ + + HPR+ DIAL++L
Sbjct: 1217 PYHGLRVFLGVHDITARHMDEHVQIIPSAGIYSHPRF---SWRTYDSDIALIRLRWKANI 1273
Query: 453 SRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDD 554
+ Y++P L N Q+ + A + G+G T++
Sbjct: 1274 TEYVRPVCLPNGYQRRLVKPRAKGVMLGWGVTEN 1307
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 37.5 bits (83), Expect = 0.008
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANR--INFVVR 311
+RIV G A P Q LR ++H +WV+TAAHC+ R +F +R
Sbjct: 138 TRIVGGTKAPPGAWPWQAMLR---SNYGGQFCGGTLVHPQWVITAAHCVYRRGPNDFKIR 194
Query: 312 LGLTNLTRPDYLVE----TTHKFIHPRYIEILGGVQTDDIALVKL 434
+G + + DY E + HP Y + DIAL++L
Sbjct: 195 MG-AHFRKGDYGTEQDFSLSRVITHPSYHKPTR--YAHDIALIEL 236
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 37.5 bits (83), Expect = 0.008
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Frame = +3
Query: 135 QSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCL--ANRIN--F 302
+SRIV G A P Q+ + + +I W+LT++HC N I+ F
Sbjct: 243 ESRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQF 302
Query: 303 VVRLGLTNLTRP---DYLVETTHKFIHP-RYIEILGGVQTDDIALVKLNHHIPYSRYIQP 470
+RLG ++ + + +++ +IHP + L D+AL+KL + + +
Sbjct: 303 EIRLGEHDVRKYEGFEEIIQGDKLYIHPGLVVGDLISPGDYDVALIKLKRPAVFHKCVYS 362
Query: 471 CRLQNSEQKNINYEGAIFTVSGYGRT 548
L S N+ G V+G+G+T
Sbjct: 363 VCLP-SVTANLT-TGTKCYVTGWGKT 386
Score = 35.5 bits (78), Expect = 0.031
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Frame = +3
Query: 243 IIHHEWVLTAAHCLANRINFVVRLGLTNLTRPDYLVETTH----------KFIHPRYIEI 392
+I +WV+T+ HC R + L ++ TT FIHP+Y
Sbjct: 565 LIDKQWVVTSGHCFDQRPYAYIPLSYYEFRLGEHRESTTEGWEEIIKGEKLFIHPKY--K 622
Query: 393 LGGVQTD---DIALVKLNH-HIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRT 548
LGG+ DIALVKL + Y R C + S +GA V+G+GRT
Sbjct: 623 LGGLDYTGDYDIALVKLKRPAVFYKRVHSVCLPEKSWSPP---DGAGCYVTGWGRT 675
Score = 27.9 bits (59), Expect = 6.2
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 9/111 (8%)
Frame = +3
Query: 243 IIHHEWVLTAAHCLANRINFVVRLGLTNLTRPD-YLVETTHKFIHPRYIE-----ILGGV 404
II WV+TA HC+ + + D +E ++ P I ++GGV
Sbjct: 14 IIDPHWVVTAGHCVVPWSPRAIGTRVLRFAEHDSSRMEGYEQYAIPDRIHLHPGFVIGGV 73
Query: 405 QTD---DIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRT 548
DIAL+ L I +S IQP L + + G + ++G+G T
Sbjct: 74 SHPGYYDIALLHLAKPIQFSDRIQPICLPQDDTE--FPAGKMCYLTGWGET 122
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 37.1 bits (82), Expect = 0.010
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 9/150 (6%)
Frame = +3
Query: 141 RIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLA---NRINFVVR 311
RIV G A P Q+S+R+ + W+LTAAHC+ N ++ V
Sbjct: 30 RIVGGDEAVPHSWPWQVSIRLKGSHICGGSLLSPL----WLLTAAHCVIRSNNSADYTVI 85
Query: 312 LGLTN--LTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRLQN 485
+G L ++ + T +K H +Y+ G + D+AL+KL +S + P L
Sbjct: 86 VGAHKRVLDGTEHKLSTFYK--HEKYVG--GKDKKHDLALIKLAKPATFSTKVSPVCLPK 141
Query: 486 SEQKNINYEGAIFT-VSGYGR---TDDPWN 563
E T S G+ T +PW+
Sbjct: 142 QGDLMKERENCFATGKSANGKTALTSNPWS 171
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 36.3 bits (80), Expect = 0.018
Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRI--NFVVR 311
SRIV G A+ P Q LR ++H WV+TA+HC+ + VR
Sbjct: 247 SRIVGGTTAQRGAWPWQAMLRYYNGNHFCGGT---LVHPRWVVTASHCVHKLTTGDLYVR 303
Query: 312 LGL---TNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRLQ 482
+G T + F+HP Y + +DIAL+ L+ RY L
Sbjct: 304 MGAHWKDGKTGSEQDFRIQRIFMHPNYHSPV--QYANDIALLLLDRPARLDRYTNLACL- 360
Query: 483 NSEQKNINYEGAIFTVSGYGR 545
+ + + +G +SG+GR
Sbjct: 361 -APRSSPLPDGTRCWISGWGR 380
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 36.3 bits (80), Expect = 0.018
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Frame = +3
Query: 243 IIHHEWVLTAAHC---LANRINFVVRLGLTNLTRPD---YLVETTHKFIHPRYIEILGGV 404
+I +WVLTAAHC + + V++G++++ R D + F+HP+Y
Sbjct: 1270 LIAADWVLTAAHCFDRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKAIFVHPQY---NSSS 1326
Query: 405 QTDDIALVKLNHHIPYSRYIQP-CRLQNSEQKNINYEGAIFTVSGYGRT 548
D+A+++L ++ + P C + N E + G V+G+G++
Sbjct: 1327 HEHDLAVLQLQQPAEFNSRVSPICIVANEEVQ----AGRACAVAGWGQS 1371
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 35.9 bits (79), Expect = 0.023
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Frame = +3
Query: 243 IIHHEWVLTAAHCL---ANRIN--FV-VRLGLTNLTR---PDYLVETTHKFIHPRYIEIL 395
++ EW++T AHCL A ++ F+ V LG+ + L++ +H + L
Sbjct: 697 LVDQEWIMTTAHCLHVGAYQLQPQFIKVELGVHKRGQGKSSPKLLDVKRVEVHSSFKADL 756
Query: 396 GGVQTDDIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRT 548
G + T +IALV+L H + ++ I L ++ + G+ V G+G+T
Sbjct: 757 GKL-TSNIALVQLAHPLNFTDDIHAICLPTRKETEVLRGGSSGVVIGWGKT 806
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/51 (43%), Positives = 24/51 (47%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLAN 290
+RIV G A P Q LR +IH EWVLTAAHCL N
Sbjct: 258 TRIVGGTEAPVNGWPWQAMLR---SAGGSQFCGGSLIHPEWVLTAAHCLEN 305
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/51 (43%), Positives = 24/51 (47%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLAN 290
+RIV G A P Q LR +IH EWVLTAAHCL N
Sbjct: 218 TRIVGGTEAPVNGWPWQAMLR---SAGGSQFCGGSLIHPEWVLTAAHCLEN 265
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 35.1 bits (77), Expect = 0.041
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Frame = +3
Query: 243 IIHHEWVLTAAHCL------ANRINFVVRLGLTNLTR---PDYLVETTHKFIHPRYIEIL 395
++ +WV+TAAHC+ N + LG + + +HP+Y E
Sbjct: 381 LVSPQWVVTAAHCVDHVKDPKNYNELAITLGEHKRSASEGTEQRFSVARIIVHPQYFE-- 438
Query: 396 GGVQTDDIALVKLNHHIPYSRYIQ-PCRLQNSEQKNINYEGAIFTVSGYGRT 548
+DIAL+KLN ++Y+ C + E+ + +G I +G+G T
Sbjct: 439 PTAINNDIALIKLNKPARLNKYVNLACLPRQGEELS---DGKICYATGWGLT 487
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 35.1 bits (77), Expect = 0.041
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Frame = +3
Query: 135 QSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLA---NRINFV 305
QSR++ G A P QI+L+ ++ WV+TAAHC+A N +
Sbjct: 474 QSRVIGGKDAIPGAWPWQIALK----SRGNFICGGSLVSSTWVVTAAHCVARSSNPAQYQ 529
Query: 306 VRLGLTNLTRPDYLVETTH--KFI-HPRYIEILGGVQTDDIALVKLNHHIPYSRYIQP 470
+ +G N + ET + K I HP+Y ++DIAL++L S + P
Sbjct: 530 IIVGEHNRNVNEVTEETLNVKKVIAHPQY---NNPRLSNDIALIELASPAKLSSRVNP 584
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 35.1 bits (77), Expect = 0.041
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Frame = +3
Query: 123 NTDRQSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCL--ANRI 296
++D++ RIV G A+ P ++ + +I +WV+TAAHC +I
Sbjct: 717 SSDKRFRIVGGREAKAGAWPWLAAIYVKGSFRCGGA----LIARDWVVTAAHCFYYDGKI 772
Query: 297 ---NFVVRLGLTNLT---RPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSR 458
+ +VRLG + T + V ++ +HP + G+ D+AL++L + +
Sbjct: 773 VPSDILVRLGEHDRTLEEGSEQNVRASNLVLHP--LANKNGLDF-DVALIQLKGGVKLTA 829
Query: 459 YIQPCRLQNSEQKNINYEGAIFTVSGYGRT 548
Y++ L + G++ V+G+G T
Sbjct: 830 YVRTVCLPQPTDAILVRPGSVGIVAGWGST 859
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 35.1 bits (77), Expect = 0.041
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 135 QSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRIN-FVVR 311
QSR+V G A P QISLR+ +I EWVLTAAHC+ + + R
Sbjct: 78 QSRVVNGDNAAQHSWPWQISLRVNGRHICGGS----LITPEWVLTAAHCVEDFPHPSAHR 133
Query: 312 LGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHI-PYSRYIQPCRLQNS 488
+ + + ++ T F H + + ++ +D+AL+KL++ I P + C + +
Sbjct: 134 IKERSAIQQEF--RLTKLFKHKDF--SMSHLK-NDVALLKLDNPIQPSDKVNTVCLPERN 188
Query: 489 EQKNINYEGAIFTVSGYGR 545
+ + GA ++G+GR
Sbjct: 189 SRAQV---GAQCFITGWGR 204
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 34.3 bits (75), Expect = 0.072
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANR---INFVV 308
SR+V G A+ P QISLR+ +I +WV+TAAHC+ + V
Sbjct: 30 SRVVNGDNAQQHSWPWQISLRVNGRHICGGS----LIAKDWVVTAAHCVDRNPTPSGYTV 85
Query: 309 RLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRLQNS 488
+G + T + T ++ + +DIAL++L+ + S + L +S
Sbjct: 86 VVGAHHRTGNTPVQNTFRLKQLFKHEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLPSS 145
Query: 489 EQKNINYEGAIFTVSGYGRT 548
+ GA ++G+GRT
Sbjct: 146 GSR--AQAGARCYITGWGRT 163
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 34.3 bits (75), Expect = 0.072
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 126 TDRQSRIVAGWPAEDAQIPHQISL-RMXXXXXXXXXXXXXIIHHEWVLTAAHC 281
T+ ++RIV G A P Q+ + R +I+ EWVLTAAHC
Sbjct: 121 TNLRARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 33.9 bits (74), Expect = 0.095
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Frame = +3
Query: 243 IIHHEWVLTAAHCL-ANRINFVVRLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTD-- 413
++ +W++TAAHC +NR+ + V G ++ + + HP+Y + +++
Sbjct: 70 LVPEDWIVTAAHCFDSNRLRWRVVAGNDMPSKAVNTTGVSAIWRHPQYKSNIASLESGPC 129
Query: 414 --DIALVKLNHHIPYSRYIQP-CRLQNSEQKNINYEGAIFTVSGYGR 545
D+ALVKL + + P C + +++ + V+G+GR
Sbjct: 130 DYDVALVKLEKSVATTPKTVPICLVPRDTPRDLKRD---CYVAGWGR 173
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Frame = +2
Query: 167 RRSDPASDQPSYGQPRRGSQLLRRFNHSPRM-GP------DCGPLPR--QSHQLRGAFGL 319
RR P D+ YG P RG + L R P GP GP P Q +RG +
Sbjct: 873 RRQGPPRDEVQYGMPHRGMEGLTRQEFRPDFRGPRYGAPRHMGPPPHWVQPGHMRGPHPM 932
Query: 320 DEPDPPGLLG*DH 358
P PP +G H
Sbjct: 933 RFPGPPWQVGPPH 945
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANR 293
+RIV G A+ P Q LR +IH +W+LTA HC++ +
Sbjct: 52 TRIVGGTAAKQNSWPWQAQLR---TTSGFPYCGGSLIHPQWILTATHCVSGK 100
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 33.1 bits (72), Expect = 0.17
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 2/138 (1%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRINFVVRLG 317
+RIV G A P SLR +I W +TAAHC+ + V +G
Sbjct: 324 ARIVNGQEAVSHSWPWIASLRKGRSNYHTCGAT--LIRPGWAITAAHCVMRPDKYTVIVG 381
Query: 318 --LTNLTRPDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRLQNSE 491
+ + P + R + V DDIAL++L + + L + E
Sbjct: 382 SHSRDASEPSAQNIKVRRVYRHRGFSMANYV--DDIALLELERSAVINDKVSTACLPSGE 439
Query: 492 QKNINYEGAIFTVSGYGR 545
K GAI ++G+GR
Sbjct: 440 PK----VGAICYIAGWGR 453
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCL 284
+R++ G A+ P QISLR +I WV+TA+HC+
Sbjct: 28 ARVINGQNAQPHSWPWQISLRPYGRYHSCGGT---LISDRWVVTASHCV 73
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCL 284
SR+V G A P QISLR +I EWVLTAAHC+
Sbjct: 36 SRVVNGANAPQHAWPWQISLR----TNGQHICGGSLITPEWVLTAAHCV 80
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRIN 299
+RI+ G A+ P QISLR +I WV+TAAHC+ N
Sbjct: 104 ARIINGQNAQPHSWPWQISLR---GRSGFHTCGGSLISDRWVVTAAHCIHRNKN 154
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 31.9 bits (69), Expect = 0.38
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRIN 299
+RI+ G A+ P QISLR +I WV+TA+HC+ + +N
Sbjct: 844 ARIINGQNAQPHSWPWQISLRQGRRFHLCGGA---LISDRWVVTASHCIHDDLN 894
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRIN 299
+R++ G A P QISLR+ +I +WVLTA HC+ +++
Sbjct: 434 ARVIGGEDAAPHSWPWQISLRVRGKHMCGGT----LISPDWVLTAGHCVHGQLD 483
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 31.5 bits (68), Expect = 0.51
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Frame = +3
Query: 261 VLTAAHCLANRINFV-----VRLGLTNLTRPDYL--VETTHKFIHPRYIEILGGVQTDDI 419
V+TAAHC+ N FV + +G++N + D L ++ P ++ D
Sbjct: 163 VITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELDYFAVEGIYLPPEWLSGKDFSHEHDY 222
Query: 420 ALVKLNH--HIPYSRYIQPCRLQNSEQKNI 503
AL+KL +IPY I+P R+Q Q I
Sbjct: 223 ALLKLTEPTNIPYMD-IKPLRIQTGTQCKI 251
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 30.7 bits (66), Expect = 0.88
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +3
Query: 243 IIHHEWVLTAAHCLA---NRINFVVRLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTD 413
++ WVLTAAHC+ N ++ V +G + + + H +Y+ G +
Sbjct: 344 LLSSTWVLTAAHCVIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYKHEKYVG--GKDKKH 401
Query: 414 DIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGR 545
D+AL++L +S + P L + + E +T +G+GR
Sbjct: 402 DLALIRLAKPAAFSAKVSPVCLP-KQGDLLGNEKNCYT-TGWGR 443
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCL 284
SR++ G A P Q+S+ M +I +WV+TAAHC+
Sbjct: 475 SRVIGGEAARPYSWPWQVSVSMGKLHSCGGA----LISSKWVITAAHCV 519
>SB_47891| Best HMM Match : RVT_1 (HMM E-Value=1.3e-09)
Length = 969
Score = 29.1 bits (62), Expect = 2.7
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Frame = +1
Query: 10 SWPVKWRSRT*LVFYILYPLFRAIRLMPDQKRSSKISETRTANLAS*PVGLQKTLRSRIR 189
+WP W+ R + YP+ ++ L + S++ T N A V + K S I+
Sbjct: 788 TWPDNWKHRN-IAILEFYPIVLSLLLWGNDM-SNRCILFLTDNEALVHV-INKQSSSEIQ 844
Query: 190 ---SAFVWSAPSGESAPAAVQSFTT-----NGS*LRPTASPIASTSW 306
S+ SA SG+S+P+A T S L+P++ PI +W
Sbjct: 845 INGSSHSGSAASGDSSPSAASELATVVTKLLQSSLQPSSMPIYRRAW 891
>SB_56201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = +2
Query: 65 PCSGQSG*CRIRSDHRRSPKHG--PPISH--RSRLACRRRSDPASDQPSYGQPRRG 220
P SG SG H R+P G P S S R+ SDP P YG G
Sbjct: 582 PSSGSSGRSTPTRWHPRTPGSGNSSPCSSSTNSPYVVRKSSDPGKPSPGYGDSHAG 637
>SB_50535| Best HMM Match : PPE (HMM E-Value=1.1)
Length = 299
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 12 MAGKMAVAYLIGILYTVSLVQ-GNPVNAGSEAIIEDLRNTDRQSRIVAGWPAEDAQIPHQ 188
MA V L ++ ++ VQ G + +G+E II NT R +R+V P ++ H
Sbjct: 78 MARAKTVEPLKSVVNNMTTVQHGYNLRSGNEKIIGPQANTYRFARVVHKAPCGGLRLTHG 137
Query: 189 ISLRM 203
++ R+
Sbjct: 138 VTTRV 142
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 132 RQSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLA 287
R+ RIV G + + P Q +L + +I +WV+TAAHC +
Sbjct: 23 RKRRIVGGIESANGAWPWQAALFLNGTHHRCGGS---VIKSQWVVTAAHCFS 71
>SB_28643| Best HMM Match : COX_ARM (HMM E-Value=3.3)
Length = 217
Score = 28.3 bits (60), Expect = 4.7
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 331 PARITWLRPHTSSSIRV 381
P ++TW RP+T SS+R+
Sbjct: 9 PIQVTWTRPNTDSSVRM 25
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 27.9 bits (59), Expect = 6.2
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRINFVVRLG 317
SR+V+G A + P Q L + +I +WVLTA HC+ R+
Sbjct: 60 SRVVSGDDATLGEWPWQAWLHVTPHGFVCGGS---LIAPQWVLTAGHCILTEDPEKYRVV 116
Query: 318 LTNLTR-----PDYLVETTHKFIHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRLQ 482
L ++ R + + HP Y + +D+AL++L+ + ++ L
Sbjct: 117 LGDVDRDTTEGSEQIFHVRRIIKHPHYSRDV--PYDNDVALLQLSRPAFVTSFVNTVCLP 174
Query: 483 NSEQK 497
E+K
Sbjct: 175 AQEEK 179
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +3
Query: 369 IHPRYIEILGGVQTDDIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRT 548
I+ +Y+E+ +Q + + +LN+++ + +Q+ I+YE A+ +V G R
Sbjct: 351 IYSQYVEVSDALQREKLENTRLNNYMDQILKEIEEKAPLLQQQKIDYERALHSVDGLTRR 410
Query: 549 DD 554
D
Sbjct: 411 LD 412
>SB_48215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 51 LYTVSLVQGNPVNAGSEAIIEDLRNTDR 134
LY VSL +P+N EA+ DLR +R
Sbjct: 16 LYKVSLRFQSPINGQKEAMFRDLRELNR 43
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 27.5 bits (58), Expect = 8.2
Identities = 22/84 (26%), Positives = 34/84 (40%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRINFVVRLG 317
+RIV G A P Q LR ++H +V+TA+HC+ + +R+
Sbjct: 22 TRIVGGTAAPKNAWPWQAQLR---SASGFPFCGGTLVHPRFVVTASHCIDKKTPSSLRIR 78
Query: 318 LTNLTRPDYLVETTHKFIHPRYIE 389
L R + T F R I+
Sbjct: 79 LGAHRRAESGESTVQDFRVKRIIK 102
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 141 RIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCL 284
RIV G EDA +PH ++ ++ W LTAAHCL
Sbjct: 240 RIVNG---EDA-VPHSWPWQLSFRYKGSHICGASLLTPGWALTAAHCL 283
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = -2
Query: 272 RSQDPFVVND*TAAGADSPDGADHTKADLMRDLSVFCRPT---GYDARLAVRVSEIFD 108
R F N A D AD T+ D R SVFC P D + +R I D
Sbjct: 912 RVSSVFAPNKLDQTEAMDTDDADDTEVDTRRRASVFCFPAFLKSIDKLIDIRAKAIVD 969
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 138 SRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLANRIN 299
+RI+ G A P Q+SLR+ ++ W LTAAHC+ N
Sbjct: 84 TRIINGEEAVPNSWPWQLSLRVYGSHNCGAS----LLSPGWALTAAHCVQRSSN 133
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,858,662
Number of Sequences: 59808
Number of extensions: 387712
Number of successful extensions: 945
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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