Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12h23f
(542 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 44 1e-04
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 39 0.002
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 35 0.037
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 32 0.26
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 32 0.26
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 31 0.80
SB_44067| Best HMM Match : Mucin (HMM E-Value=5.4) 31 0.80
SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 30 1.4
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 1.9
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_17550| Best HMM Match : WW (HMM E-Value=0.0012) 29 3.2
SB_40905| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_35417| Best HMM Match : DTHCT (HMM E-Value=1.7) 28 4.3
SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_42974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_25282| Best HMM Match : rve (HMM E-Value=6.3e-12) 28 5.7
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41) 27 7.5
SB_52214| Best HMM Match : Alpha_E3_glycop (HMM E-Value=5.1) 27 7.5
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_12466| Best HMM Match : Transferrin (HMM E-Value=4.4e-21) 27 7.5
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05) 27 7.5
SB_38723| Best HMM Match : rve (HMM E-Value=4.7e-13) 27 7.5
SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05) 27 7.5
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_43631| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_16838| Best HMM Match : TolA (HMM E-Value=2) 27 9.9
SB_15789| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19) 27 9.9
SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077) 27 9.9
SB_40803| Best HMM Match : SRCR (HMM E-Value=0.00013) 27 9.9
SB_39385| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-28) 27 9.9
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 276 NGNINSVRNSHYRANRGTVVIVHGWNNNGNTQMNPLIRSAFLAVQDVNVIVVDWHRLANS 455
+ ++ ++ S Y + T VI HG+ +G+T +R A L DVNV++ DW A+
Sbjct: 87 DSDVKKLKASTYDGKKRTFVIAHGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADG 146
Query: 456 NYNTAAAGVPDVG 494
Y A A VG
Sbjct: 147 MYWQATANTRLVG 159
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 297 RNSH-YRANRGTVVIVHGWNNNGNTQMNPLIRSAFLAVQDVNVIVVDWHRLAN--SNYNT 467
RNS +R +R V+I+HG+ +GN ++R L + +NVI VDW A+ + Y+
Sbjct: 14 RNSTAFRGDRKLVLIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHV 73
Query: 468 AAAGVPDVGRALGNFL 515
AA VG L +
Sbjct: 74 AAGNTRVVGAQLAELI 89
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Frame = +3
Query: 204 SRSGANNQYWLFTXXXXXXXXVLVNGNINSVRNSHYRANRGTVVIVHGWNNNGNTQMNPL 383
S + + Q+ L+T L +++ R++H+ A+R TV+I+HG+ G T + +
Sbjct: 67 SPASIHTQFMLYTRESPVQYQQLYE-DMDITRDTHFNASRRTVIIIHGF--AGFTTLTSI 123
Query: 384 ----------IRSAFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINN 533
+++ L D NVI+VDW R A + A A VG L L
Sbjct: 124 RHEVNWWGFPMKNELLWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEER 183
Query: 534 AG 539
+G
Sbjct: 184 SG 185
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 384 IRSAFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINNAG 539
IR A + +D NVI DW R A Y A A VG + + +L N G
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTG 683
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 207 RSGANNQYWLFTXXXXXXXXVLVNGNINSVRNSHYRANRGTVVIVHGWNNNGNTQMNPL 383
R G N + LFT V+ + +++ ++ S Y + T++IVHG+ + + P+
Sbjct: 483 RVGTN--FRLFTRSNPLISNVIDDSDVSKLQASRYDGKKRTIIIVHGFIEHDSVPCPPV 539
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 35.1 bits (77), Expect = 0.037
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Frame = +3
Query: 234 LFTXXXXXXXXVLVNGNINSVRNSHYRANRGTVVIVHGWNNNGNTQM--------NPLIR 389
L+T VL + + ++ S + +R T IVHG+ + ++
Sbjct: 57 LYTQASPDKYEVLSDADTATIEKSSFLPHRTTRFIVHGYAGLDSVDSIIDLKGWWGIRMK 116
Query: 390 SAFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINNAG 539
L D NVI+VDW R A Y A A VG + F+ +++ +G
Sbjct: 117 DELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSG 166
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 32.3 bits (70), Expect = 0.26
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Frame = +1
Query: 205 PEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGT--TMATPR*T 378
PE P + T +P+ T AT + TT PTE+ + T G T P T
Sbjct: 370 PETTPALETTSAPEST--------AATESTVAPETTVPTEITAAPETTGAPDTTLAPETT 421
Query: 379 LSSDPPSLPFKT--*MSSLLTGTDLLIQTTILP--PLASRMSVAPSAT 510
++ + P T +++ T T + +TT P LA ++ AP T
Sbjct: 422 VALESTMTPESTVPPETTVATETTVAPETTAAPESTLAPEITAAPDTT 469
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 32.3 bits (70), Expect = 0.26
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Frame = +1
Query: 205 PEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGT--TMATPR*T 378
PE P + T +P+ T AT + TT PTE+ + T G T P T
Sbjct: 2066 PETTPALETTSAPEST--------AATESTVAPETTVPTEITAAPETTGAPDTTLAPETT 2117
Query: 379 LSSDPPSLPFKT--*MSSLLTGTDLLIQTTILP--PLASRMSVAPSAT 510
++ + P T +++ T T + +TT P LA ++ AP T
Sbjct: 2118 VALESTMTPESTVPPETTVATETTVAPETTAAPESTLAPEITAAPDTT 2165
Score = 28.7 bits (61), Expect = 3.2
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +1
Query: 169 TCMNPSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSST- 345
T + P T APE T +P+ T +AR + TA T TTAP E S T
Sbjct: 2530 TTVEPETT--LAPETTAAPETTLAPETT--VAREITTAPVTTSVSETTAPPETTASPETT 2585
Query: 346 -DGTTMATPR*TLSSDPPSLPFKT 414
+ T P T++ + + P T
Sbjct: 2586 VEPETTVAPETTVTPEATAAPDTT 2609
>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 683
Score = 30.7 bits (66), Expect = 0.80
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 251 PKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPC-RSRRECHR 427
P S C+R+ +E + R+PR HRP+ + + P + S + R P R R+ H+
Sbjct: 490 PWSSNKDCDRERNSVKEISTTRRPRKSTHRPK--KPTRRPRKNSPRTRKPTRRPRKNTHK 547
>SB_44067| Best HMM Match : Mucin (HMM E-Value=5.4)
Length = 238
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +1
Query: 337 SSTDGTTMATPR*TLSSDPPSLPFK----T*MSSLLTGTDLLIQTTILPPLASRMSVAPS 504
++T T T T+++ PPSLP + T S+ +TG L T + + RMS PS
Sbjct: 161 AATTSATNTTATMTIANTPPSLPQQQILLTIKSTKITGQQPLQYTNSVGSIYHRMSSKPS 220
Query: 505 ATFWFG 522
+ + G
Sbjct: 221 SRLFVG 226
>SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 30.7 bits (66), Expect = 0.80
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 251 PKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPC-RSRRECHR 427
P S C+R+ +E + R+PR HRP+ + + P + S + R P R R+ H+
Sbjct: 127 PWSSNKDCDRERNSVKEISTTRRPRKSTHRPK--KPTRRPRKNSPRTRKPTRRPRKNTHK 184
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 29.9 bits (64), Expect = 1.4
Identities = 29/101 (28%), Positives = 45/101 (44%)
Frame = +1
Query: 181 PSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTM 360
P T+ + A P++ SP + TI AT+TP + TT+P P TT
Sbjct: 16 PPTIPFLAA-TTPLLMVTTSPLTSPTIPFL---ATTTPLLMVTTSPLPSPTIPFLATTTP 71
Query: 361 ATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPLAS 483
T + PP++PF + LL T + + +P LA+
Sbjct: 72 LLMVTTSTLPPPTIPFLATTTPLLMVTTSPLPSPTIPFLAT 112
Score = 29.9 bits (64), Expect = 1.4
Identities = 30/101 (29%), Positives = 43/101 (42%)
Frame = +1
Query: 181 PSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTM 360
P T+ + A P++ SP TI AT+TP + TT+P P TT
Sbjct: 170 PPTIPFLAT-TTPLLMVTTSPLPPPTIPFL---ATTTPLLMVTTSPLPPPTIPFLATTTS 225
Query: 361 ATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPLAS 483
T PP++PF + LL T + T +P LA+
Sbjct: 226 LLMVTTSPLPPPTIPFLATTAPLLMVTTSPLPTPTIPFLAT 266
Score = 29.1 bits (62), Expect = 2.5
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +1
Query: 181 PSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTM 360
PS + AP++ SP TI AT+TP + TT+P P TT
Sbjct: 125 PSPTIPFLATTAPLLMVTTSPLPPPTIPFL---ATTTPLLMVTTSPLPPPTIPFLATTTP 181
Query: 361 ATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTTI-LPP 474
T PP++PF L T T LL+ TT LPP
Sbjct: 182 LLMVTTSPLPPPTIPF------LATTTPLLMVTTSPLPP 214
Score = 27.1 bits (57), Expect = 9.9
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 280 ATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQT 459
AT+ P + TT+P P TT T + PP++PF L T LL+
Sbjct: 243 ATTAPLLMVTTSPLPTPTIPFLATTTPLLIVTTSTLPPPTIPF------LATTPSLLMVV 296
Query: 460 TILPP 474
T+ PP
Sbjct: 297 TLTPP 301
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 319 TEVPLSSSTDGTTMATPR*TLSSDPPSLPFKT*M--SSLLTGTDLLIQTTILPPLASRMS 492
T+ P ++ D T A P T+S + P T + S++ GT ++ +TT +P +
Sbjct: 3548 TDEP-ETTVDPETTAVPETTVSQETTMAPETTALPESTVAPGTTVVPETTAVPETTVVTT 3606
Query: 493 VAPSAT 510
VAP +T
Sbjct: 3607 VAPDST 3612
Score = 28.7 bits (61), Expect = 3.2
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +1
Query: 169 TCMNPSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSST- 345
T + P T APE T +P+ T +AR + TA T TTAP E S T
Sbjct: 1015 TTVEPETT--LAPETTAAPETTLAPETT--VAREITTAPVTTSVSETTAPPETTASPETT 1070
Query: 346 -DGTTMATPR*TLSSDPPSLPFKT 414
+ T P T++ + + P T
Sbjct: 1071 VEPETTVAPETTVTPEATAAPDTT 1094
Score = 28.3 bits (60), Expect = 4.3
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +1
Query: 202 APEAAPIISTGFSPDRTKTIARCL*TATS-TP*GIHTTAPTEVPLSSSTDGTTMATPR*T 378
AP++ T +P T T + T+ P T VP +++ TT++ T
Sbjct: 3002 APDSTAAPETTVAPGTTVTPQSTVAPETTIAPETTDEPETTVVPETTAVPETTVSQET-T 3060
Query: 379 LSSDPPSLPFKT*M--SSLLTGTDLLIQTTILPPLASRMSVAPSATFWFGSSTMLE 540
++ + +LP T ++++ T + +TT++ +A +VAP TF G++ E
Sbjct: 3061 VAPETTALPESTVAPETTVVPETTAVPETTVMTTVAPDSTVAPVTTFAPGTTVTPE 3116
Score = 27.1 bits (57), Expect = 9.9
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Frame = +1
Query: 202 APEAAPIISTGFSPDRT----KTIARCL*TATSTP*GIHTTAPTEVPLSSSTD--GTTMA 363
APE + T +PD T T TA T + T E ++ T T A
Sbjct: 1132 APETTMVPDTTVAPDTTDAPVTTFVPETTTALETTTALEITVEPETSVAPETSLAPETTA 1191
Query: 364 TPR*TLSSDPPSLPFKT*MSSLLTG---TDLLIQTTILPPLASRM-SVAPSATFWFGSST 531
P T + + + P T ++S TG T + +TT++P + + AP +T ST
Sbjct: 1192 APETTAAPETTAGPATT-LASTTTGAPETTVAPETTVVPETTPALETTAPESTSASTEST 1250
Query: 532 M 534
+
Sbjct: 1251 V 1251
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +1
Query: 202 APEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TL 381
APEA + T P T + + + T TP T+P + +S+ G + TP+ T
Sbjct: 3089 APEATVVPKTTVGPSTTIS-PKTETSITETP----ETSPATISISTEKTGKAITTPQGTT 3143
Query: 382 SSDPPS 399
+ PPS
Sbjct: 3144 TELPPS 3149
Score = 28.7 bits (61), Expect = 3.2
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Frame = +1
Query: 202 APEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TL 381
APE+ T SP+ T L T+ T V ++ T+A P T+
Sbjct: 1805 APESTVSPETTVSPETTAVPETTLSPGTTVAQDTTAAPETTVAPETTVSPETIAEPETTV 1864
Query: 382 SSDPPSLPFKT*M--SSLLTGTDLLIQTTILP--PLASRMSVAPSAT 510
+ + + P T S++ + L +TT P LA +VAP T
Sbjct: 1865 APETTTAPVTTLPPDSTMAPKSTLAPETTAAPDTTLAPETTVAPDTT 1911
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.1 bits (62), Expect = 2.5
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Frame = +1
Query: 202 APEAAPIISTGFSPDRT---KTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR 372
APE T P T KT A TA G T T VP+++S GTT+A
Sbjct: 2399 APETTSPTETTAVPGTTAAPKTTASPETTAKPDTTGAAET--TAVPVTTSVPGTTVAAET 2456
Query: 373 *TLSSDPPSLPFKT*M--SSLLTGTDLLIQTTI 465
T+ D ++P T ++ +TGT L +TT+
Sbjct: 2457 -TVVRDTTAVPGTTAALEATAVTGTSTLPKTTV 2488
>SB_17550| Best HMM Match : WW (HMM E-Value=0.0012)
Length = 677
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 290 LREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQI--RLPCRSRRECH 424
++E + P + +Y H+ W+HP + SH+I + C R CH
Sbjct: 19 MKESSSRPGR-KYFFHKMSGMTSWKHPLDLSHKIPAEISCSKTRACH 64
>SB_40905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 28.3 bits (60), Expect = 4.3
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -3
Query: 267 PGDCFGSVW*K-ASTDYWRRFWSPVIHSRWVHAG---PLAAEHLHHQASRCNGFLPLH-S 103
PGD FGS W + S DY+ SP + +R H G P A L +R FL + S
Sbjct: 85 PGDRFGS-WDRFESRDYFESCTSPRVTNRQTHGGVVRPSDAYWLKPYLNRPKSFLWVSVS 143
Query: 102 DYCLRES 82
DY LR++
Sbjct: 144 DY-LRDA 149
>SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2085
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 207 WSPVIHSRWVHAGPLAAEHLHHQASRCNGFLP 112
W V+ RWV A P+ ++ +R GF P
Sbjct: 1845 WPKVLKPRWVTALPIVISDINATKTRMTGFAP 1876
>SB_35417| Best HMM Match : DTHCT (HMM E-Value=1.7)
Length = 357
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 278 RQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEP 379
++HQL+ + QP+ R H+P+ +Q H +P
Sbjct: 317 KRHQLQLQQPRSHQPQPRSHQPQPQQPRSHQPQP 350
>SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 248 EPKQSPGACERQHQLREEFTLPRQPRYRCHR--PRMEQQWQHPDEPSHQIRLPCRSRREC 421
+ +Q P ++Q Q R + +QPR + + PR++QQ Q P Q + P +++
Sbjct: 88 QQQQQPRLKQQQQQPRLKQQQQQQPRLKQQQQQPRLQQQQQQPRLKQQQQQQPRLKQQQQ 147
Query: 422 H 424
H
Sbjct: 148 H 148
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 248 EPKQSPGACERQHQ--LREEFTLPRQPRYRCHRPRMEQQWQHPD 373
+ +Q P ++Q Q L+++ PR + + +PR++QQ QH D
Sbjct: 107 QQQQQPRLKQQQQQPRLQQQQQQPRLKQQQQQQPRLKQQQQHHD 150
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 242 QTEPKQSPGACERQHQ---LREEFTLPRQPRYRCHRPRMEQQWQHP 370
Q + +Q P ++Q Q L+++ PR + + +PR++QQ Q P
Sbjct: 76 QQQQQQQPRLKQQQQQQPRLKQQQQQPRLKQQQQQQPRLKQQQQQP 121
>SB_42974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 212 RRQ*SVLAFHQTEPKQSPGACERQHQLREEFTLPRQ 319
RR S +FH++E K G + +H+L FTLP Q
Sbjct: 343 RRSYSHSSFHRSECKPRRGHIQVKHKLGCVFTLPSQ 378
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 310 TAPTEVPLSSSTDGTTMATPR 372
T PT VP + ST TT TPR
Sbjct: 138 TTPTTVPTTLSTTATTATTPR 158
>SB_25282| Best HMM Match : rve (HMM E-Value=6.3e-12)
Length = 451
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -3
Query: 222 YWRRFWSPVIHSRWVHAGPLAAEHLHHQASRCNGFLP 112
YW+ S + WV A P+ ++ +R GF P
Sbjct: 388 YWKELASGETNREWVTALPIVISDINASKTRMTGFAP 424
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 27.9 bits (59), Expect = 5.7
Identities = 27/88 (30%), Positives = 38/88 (43%)
Frame = +1
Query: 202 APEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TL 381
A E P +T S T T + T+ ST TTA T+ S++T TT T L
Sbjct: 236 AAETTPTTTTSASTT-TATTTKATTTSVST-----TTATTKEEESTTTAETTTVTATKPL 289
Query: 382 SSDPPSLPFKT*MSSLLTGTDLLIQTTI 465
SS+ S T + T+ +QT +
Sbjct: 290 SSEETSTMLPTTAPTPKPDTECQVQTML 317
>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
Length = 689
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 375 NPLIRSAFLAVQDVNVIVVDWHRLANSN 458
NPL S L ++N I V+W + + N
Sbjct: 657 NPLAESGLLTANEMNTIFVNWKEIIHCN 684
>SB_52214| Best HMM Match : Alpha_E3_glycop (HMM E-Value=5.1)
Length = 320
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 90 GDNSHYVEGESRYIWMPDGEGVPQLVDLHEPIDYE 194
G+N + GESRYI G+G+ H+P DY+
Sbjct: 250 GENK--LNGESRYIHGTKGKGMFTFYGGHDPEDYQ 282
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.5 bits (58), Expect = 7.5
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +1
Query: 169 TCMNPSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTD 348
T PST A + S RT + +TSTP TT T P +S+T
Sbjct: 62 TTRAPSTSTPRAGSTTTTSAPSTSTPRTGSTTTTSAPSTSTPRTGSTTT-TSAPSTSTTS 120
Query: 349 GTTMATPR*TLSSDPPSLPFKT*MSSLLTGT 441
+T P + ++ +T +S++T T
Sbjct: 121 NSTTRAPSTSTPRTGSTITLRTSTTSVMTTT 151
>SB_12466| Best HMM Match : Transferrin (HMM E-Value=4.4e-21)
Length = 291
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 48 LVTLCSGVAIPTIPGDNS-HYVEGESRYIWMPDGEG 152
L +LC + PT PGD S Y Y+ + +G G
Sbjct: 195 LPSLCGACSNPTCPGDESERYYGYNGSYVCLVEGRG 230
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +2
Query: 251 PKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRS 409
P+Q P + Q ++ LP Q + RP EQQ Q P P Q + P RS
Sbjct: 472 PEQQPQLPFQPGQSPQQPFLPDQQSQKPFRP--EQQPQQPFRPGQQPQQPFRS 522
>SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 809
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 281 QHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECHR 427
Q LRE L + RC R E + P++P+H + + C + R C R
Sbjct: 398 QRPLRERHELRKNDCRRCRCCRFEGLPRGPEDPAHVV-VYCGTCRPCIR 445
>SB_38723| Best HMM Match : rve (HMM E-Value=4.7e-13)
Length = 253
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -3
Query: 222 YWRRFWSPVIHSRWVHAGPLAAEHLHHQASRCNGFLP 112
YW+ S + WV A P+ ++ +R GF P
Sbjct: 191 YWKELASGETNREWVTALPIVISDMNATKTRMTGFAP 227
>SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 983
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 281 QHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECHR 427
Q LRE L + RC R E + P++P+H + + C + R C R
Sbjct: 572 QRPLRERHELRKNDCRRCRCCRFEGLPRGPEDPAHVV-VYCGTCRPCIR 619
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 223 ISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TLSSDPPSL 402
+ T K + + TAT + TT P ++ T TM P T ++ PP
Sbjct: 716 VMTSVETRTDKVTSTAMETATVMSTKVVTTCSANCPSATPTTSLTMTPPMLTSTTPPPER 775
Query: 403 P 405
P
Sbjct: 776 P 776
>SB_43631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1157
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 205 PEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR 372
P P+ +P+R TIA +ATST GI T+ E S S T +TP+
Sbjct: 823 PVGEPVFKPCVTPNRPATIAST--SATSTSFGISTSTYQESSNSESA-STFQSTPQ 875
>SB_16838| Best HMM Match : TolA (HMM E-Value=2)
Length = 371
Score = 27.1 bits (57), Expect = 9.9
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 206 QKRRQ*SVLAFHQTEPKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPD---E 376
QKR+Q Q +Q +RQ Q R + RQP+ + + + +QQ Q P +
Sbjct: 72 QKRQQQEQKLQQQQRRQQQQ---KRQPQQRRQQQQQRQPQQKSQQQQQQQQPQQPSHGQQ 128
Query: 377 PSHQIRLPCRSRRECH 424
HQ RL ++ H
Sbjct: 129 EPHQRRLFQNGQQATH 144
>SB_15789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 194 FIVDGFMQVH*LRNTFTIRHPDVTAFSLYIVTI 96
F+ DGF ++TF IR+P+ +SLY +I
Sbjct: 96 FLEDGFKD---FQHTFLIRNPEKAVYSLYKASI 125
>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
Length = 1199
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 166 WTCMNPSTMNYWAPEAAPIISTGFSPDRTKTIARC 270
W + S + +AP++ F PD +KTI C
Sbjct: 462 WEWEDRSLLTQSKELSAPVLDIAFDPDDSKTIVSC 496
>SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077)
Length = 677
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 YRCHRPRMEQQWQHPDEPSHQIRLPCRSRRE-CH 424
Y CH + + W HP + + P +++ CH
Sbjct: 260 YLCHPTKTQANWYHPTKTQANLNHPIKTQANWCH 293
>SB_40803| Best HMM Match : SRCR (HMM E-Value=0.00013)
Length = 269
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = +2
Query: 311 PRQPRYRCHRPRMEQQWQHPDEPSHQIRLP----CRSRRECHRC*LAQT 445
PR P R + + HPD P H + P R+R + +C QT
Sbjct: 20 PRHPNVRTRNKTRTRTYTHPDAPIH-VHAPRHANVRTRTQTRKCTNTQT 67
>SB_39385| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-28)
Length = 360
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 376 FIWVLPLLFHPWTMTTVPRLAR*CEFLTELMLPFTSTWRLFWFCLVKSQY*LLAP 212
FI +P L +TT+ C F+T ++ F TW F + ++ +AP
Sbjct: 153 FILAVPTLVFK-DLTTLSAYTAFCAFITLILPSFIITWTYFEIVKISKRHARIAP 206
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,781,767
Number of Sequences: 59808
Number of extensions: 401842
Number of successful extensions: 2694
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2681
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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