Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12h23f
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.53 
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    26   0.70 
AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    26   0.92 
Z22930-4|CAA80516.1|  267|Anopheles gambiae Trypsinogen precurso...    25   2.1  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   2.1  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   2.1  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   2.8  
EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.          24   3.7  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   4.9  
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    23   4.9  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   6.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.5  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   8.6  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   8.6  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   8.6  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   8.6  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.6 bits (56), Expect = 0.53
 Identities = 13/59 (22%), Positives = 27/59 (45%)
 Frame = +2

Query: 242 QTEPKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRE 418
           Q + +Q     ++Q Q R++    +Q + +    + +QQWQ   +   Q R     R++
Sbjct: 330 QRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLPHRKQ 388



 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 275 ERQHQLREEFTLP--RQPRYRCHRPRMEQQWQHPDE 376
           ++Q Q  E +  P  RQ R +  RPR +QQ Q   +
Sbjct: 255 QQQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQ 290



 Score = 25.0 bits (52), Expect = 1.6
 Identities = 14/62 (22%), Positives = 30/62 (48%)
 Frame = +2

Query: 203 LQKRRQ*SVLAFHQTEPKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPS 382
           L+++RQ       Q + +Q     +RQ Q +++    +Q + +  R + ++Q Q   +  
Sbjct: 302 LRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQ 361

Query: 383 HQ 388
           HQ
Sbjct: 362 HQ 363



 Score = 24.2 bits (50), Expect = 2.8
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = +2

Query: 206 QKRRQ*SVLAFHQTEPKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSH 385
           Q+++Q      HQ + +Q     ++Q Q R+     +Q + +   PR++QQ Q   +   
Sbjct: 351 QRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLPHRKQTQLQL-SPRLQQQQQQQQQSQQ 409

Query: 386 Q 388
           Q
Sbjct: 410 Q 410



 Score = 24.2 bits (50), Expect = 2.8
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 275 ERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRE 418
           ++Q Q  E +  P+  + R  +   +QQ Q P +   Q + P + R +
Sbjct: 442 QQQQQQGERYVPPQLRQQRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQ 489



 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 242 QTEPKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQ 388
           Q  P+Q     ++Q Q + E  +P Q R +  + + +QQ Q   +   Q
Sbjct: 276 QQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQ 324



 Score = 23.0 bits (47), Expect = 6.5
 Identities = 14/53 (26%), Positives = 21/53 (39%)
 Frame = +2

Query: 206 QKRRQ*SVLAFHQTEPKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQ 364
           Q+R+Q       Q  P+Q     +R  Q R +   P +P      P   Q W+
Sbjct: 458 QQRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWE 510


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 441 RLANSNYNTAAAGVPDVGRALGNFLVWL 524
           R  +S+Y  AA G+ D    +G F+ WL
Sbjct: 151 RKLSSSYYLAALGLSDTFYLIGQFVAWL 178


>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
          carrier protein TOL-2 protein.
          Length = 248

 Score = 25.8 bits (54), Expect = 0.92
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +3

Query: 27 LFIALAGLVTLCSGVAIP 80
          +F+ LAGLV L SG+ +P
Sbjct: 6  IFVLLAGLVALGSGIKLP 23


>Z22930-4|CAA80516.1|  267|Anopheles gambiae Trypsinogen precursor
           of ANTRYP7 protein.
          Length = 267

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 324 GTVVIVHGWNNNGN-TQMNPLIRSAFLAVQD 413
           GT+ IV GW +  N  + N ++R+A +   D
Sbjct: 158 GTMTIVSGWGSTHNAAESNAILRAANVPTVD 188


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 450 NSNYNTAAAGVPDVGRALGNFLVWL 524
           +S+Y  AA G+ D    +G F+ WL
Sbjct: 73  SSSYYLAALGISDTCYLVGLFVTWL 97


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 219 WRRFWSPVIHSRWVH 175
           W+R W   +H RW +
Sbjct: 854 WQREWDESVHGRWTY 868


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +1

Query: 214 APIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATP 369
           AP  +T  +P  T T+A    T T+   G  TT        ++T  T   TP
Sbjct: 44  APTTTTTVAPTTTTTVAPGQTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTP 95


>EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
 Frame = -3

Query: 219 WRRFWSPVIHSRWVHAGPLAA--EHLHHQASRC 127
           W     PV++S+W    P  A  EH    A RC
Sbjct: 104 WALAGRPVLYSQWAAGEPNHARGEHGQQPAERC 136


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 153 HLHHQASRCNG 121
           H HHQASR NG
Sbjct: 55  HKHHQASRENG 65


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +3

Query: 39  LAGLVTLCSGVAIPTIPGDNSHYVEGESRYIWMPDGEGVPQLVDLHEPID 188
           +A L TLC G      P    HY E   + I + +G+  P+     E  D
Sbjct: 13  VAALATLCHGACDEPCPVPPKHYAELGCKPI-LEEGQCCPKRYQCPELTD 61


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = -3

Query: 249 SVW*KASTDYWRRFWSPV----IHSRWV 178
           + W K + DY++R WS +    ++  W+
Sbjct: 468 TAWIKFNPDYFKRDWSTIYGEELYDHWI 495


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 462 NTAAAGVPDVGRALGNFLVWLINNAGG 542
           N ++A  P  GRA G+ + + I N GG
Sbjct: 505 NPSSAVTPGGGRAEGDKVTFQIPNGGG 531


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 275 ERQHQLREEFTLPR-QPRYRCHRPRMEQQWQHPDEPSHQ 388
           ++QHQ RE+    R Q + + H+ + +QQ Q   +   Q
Sbjct: 266 QQQHQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQ 304


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 314 RQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECH 424
           +Q  +  H+P+ + Q Q+   P H    P + + E H
Sbjct: 309 QQHHHHQHQPQQQHQQQYHSHPHH---TPVQFKTELH 342


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 308 LPRQPRYRCHRPRMEQQWQHPDEPSHQ 388
           LP+Q   R    R  QQW H      Q
Sbjct: 259 LPQQSAQRQPAHRQHQQWPHQQNGQQQ 285


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 237 KASTDYWRRFWSPVIHSRWVH 175
           +AS   W+  WS  ++ RW +
Sbjct: 905 QASMRQWQNEWSNSLNGRWTY 925


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,758
Number of Sequences: 2352
Number of extensions: 13229
Number of successful extensions: 47
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)