Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12h16f
         (501 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearl...    32   0.25 
At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearl...    32   0.25 
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative...    30   0.76 
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative...    30   0.76 
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative...    30   0.76 
At4g11530.1 68417.m01850 protein kinase family protein contains ...    28   4.1  
At4g33600.1 68417.m04773 expressed protein                             27   5.4  
At4g11510.1 68417.m01849 expressed protein  ; expression support...    27   7.1  
At1g49740.1 68414.m05578 expressed protein similar to MAP3K-like...    27   7.1  
At5g43390.1 68418.m05304 hypothetical protein strong similarity ...    27   9.4  
At1g61600.1 68414.m06941 expressed protein                             27   9.4  

>At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearly
           identical to 3-phosphoserine phosphatase GI:3759177 from
           [Arabidopsis thaliana]
          Length = 295

 Score = 31.9 bits (69), Expect = 0.25
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -3

Query: 469 NTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILV 365
           +TLG+   ++ +  +LD+W  V+ +C+  D+ + V
Sbjct: 62  STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96


>At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearly
           identical to 3-phosphoserine phosphatase GI:3759177 from
           [Arabidopsis thaliana]
          Length = 295

 Score = 31.9 bits (69), Expect = 0.25
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -3

Query: 469 NTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILV 365
           +TLG+   ++ +  +LD+W  V+ +C+  D+ + V
Sbjct: 62  STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96


>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
           similar to cation-chloride co-transporter GB:AAC49874
           GI:2582381 from [Nicotiana tabacum], Cation-Chloride
           Cotransporter (CCC) Family Member, PMID:11500563
          Length = 975

 Score = 30.3 bits (65), Expect = 0.76
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 224 LKGSGSW*EQYQRTVGTIDSRWV 156
           +KG   W  +YQR  GTID  W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789


>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
           similar to cation-chloride co-transporter GB:AAC49874
           GI:2582381 from [Nicotiana tabacum], Cation-Chloride
           Cotransporter (CCC) Family Member, PMID:11500563
          Length = 975

 Score = 30.3 bits (65), Expect = 0.76
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 224 LKGSGSW*EQYQRTVGTIDSRWV 156
           +KG   W  +YQR  GTID  W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789


>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
           similar to cation-chloride co-transporter GB:AAC49874
           GI:2582381 from [Nicotiana tabacum], Cation-Chloride
           Cotransporter (CCC) Family Member, PMID:11500563
          Length = 975

 Score = 30.3 bits (65), Expect = 0.76
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 224 LKGSGSW*EQYQRTVGTIDSRWV 156
           +KG   W  +YQR  GTID  W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789


>At4g11530.1 68417.m01850 protein kinase family protein contains
           Pfam PF00069: Protein kinase domain
          Length = 931

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = +2

Query: 161 ILNQWFQQCAGIVLTNYHYLSTATCFHGEF-----YDPAYRRIIA 280
           +LN  F       L  + Y+ST TCF+G F     YD   RRI++
Sbjct: 2   MLNTLFLPIFLFFLITFDYVSTQTCFNGYFKPNGTYDLNRRRILS 46


>At4g33600.1 68417.m04773 expressed protein 
          Length = 453

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 163 LESMVPTVRWYCSHQLPLPFNCYLFPWRILR 255
           L +MVP V W   HQ   P    L+ W  LR
Sbjct: 183 LSAMVPFVAWSLRHQCENPQRWVLYHWGELR 213


>At4g11510.1 68417.m01849 expressed protein  ; expression supported
           by MPSS
          Length = 85

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 355 GELRQGCEHRTSNTCHPLRPKHPAGCYYPTRCR 453
           G+ + GC+H       P  P H  GC    RCR
Sbjct: 42  GDRQPGCDHGNCPPDQPANPYH-RGCEKSKRCR 73


>At1g49740.1 68414.m05578 expressed protein similar to MAP3K-like
           protein kinase GB:CAB16796 GI:4006878 from [Arabidopsis
           thaliana]
          Length = 359

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 493 SPSEQINKNTLGYYDTLLDNSTLLDVWA--EVDGMCYSYDAHILVVILLREF 344
           S + Q+N    G+   + D     D+W     DG C+++ A    + +LREF
Sbjct: 109 SITSQLNNGVRGFMLDMYDFQN--DIWLCHSFDGTCFNFTAFQPAINILREF 158


>At5g43390.1 68418.m05304 hypothetical protein strong similarity to
           unknown protein (emb|CAB86628.1)
          Length = 643

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 177 SNSALVLFSPTTTTFQLLPVSMENSTILHTVALSLDLP 290
           S+S  +L  P +      PVS +NS I     L+L+ P
Sbjct: 3   SSSTAILLGPPSVAAMETPVSDDNSVISQIATLNLEEP 40


>At1g61600.1 68414.m06941 expressed protein 
          Length = 421

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 364 RQGCEHRTSNTCHPLRPKHPAGCYYPTRCR 453
           ++G E RTS + HP RP+   G     R R
Sbjct: 172 KKGWELRTSRSLHPRRPREALGLDEELRAR 201


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,667,192
Number of Sequences: 28952
Number of extensions: 250250
Number of successful extensions: 674
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 888318720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)