Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12h15r
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9ZZN6 Cluster: ORF267; n=1; Cyanidioschyzon merolae|Re...    34   4.0  

>UniRef50_Q9ZZN6 Cluster: ORF267; n=1; Cyanidioschyzon merolae|Rep:
           ORF267 - Cyanidioschyzon merolae (Red alga)
          Length = 267

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 24/69 (34%), Positives = 36/69 (52%)
 Frame = +1

Query: 490 FGELICKSCLYLYKSKTLDFRDLERGKKKDMFPPKVCQMSISNLSVDSHIMFRFLNCK*L 669
           FG LIC SC+ LYK KT+ F  L    KK++   ++ ++  + L + ++  F  L C  L
Sbjct: 26  FGLLIC-SCIILYKIKTIFFVILSSLPKKELIATEIYEIFSNYLIIITN--FSLLFCYPL 82

Query: 670 IFCQLID*F 696
           I   L   F
Sbjct: 83  IIYHLFSFF 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,512,415
Number of Sequences: 1657284
Number of extensions: 10521294
Number of successful extensions: 18176
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 17517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18175
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)