Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12h15r
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-86|AAF59340.2| 1014|Drosophila melanogaster CG11533-PA,...    29   6.2  
AY060246-1|AAL25285.1|  136|Drosophila melanogaster GH06646p pro...    29   8.2  

>AE014135-86|AAF59340.2| 1014|Drosophila melanogaster CG11533-PA,
           isoform A protein.
          Length = 1014

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 480 LLTCVLCTHALFFHIII 430
           +  CV+CTHA F H++I
Sbjct: 1   MYACVMCTHAPFMHVLI 17


>AY060246-1|AAL25285.1|  136|Drosophila melanogaster GH06646p
           protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 468 VLCTHALFFHIIIM*RPHCSIRIISKVFASRRHYFVVYSLQ 346
           +LC H+ F   +++  P CSI ++S +  + R    +  +Q
Sbjct: 25  ILCAHSFFARSVVVGVPDCSINLLSLLVRAPRGLRTIQPIQ 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,591,179
Number of Sequences: 53049
Number of extensions: 469977
Number of successful extensions: 690
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)