Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12h15r
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.0  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   5.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.6  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 333 LNKIHNIKNTLRHY 292
           LN ++N+KNTL  Y
Sbjct: 394 LNDLYNVKNTLDSY 407


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 430 DYYMKKKCVRTKYTCQK*NFFG 495
           DYY K K    KYT ++ NF G
Sbjct: 426 DYYHKYKENLPKYTTEELNFPG 447


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 430 DYYMKKKCVRTKYTCQK*NFFG 495
           DYY K K    KYT ++ NF G
Sbjct: 426 DYYHKYKENLPKYTTEELNFPG 447


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 430 DYYMKKKCVRTKYTCQK*NFFG 495
           DYY K K    KYT ++ NF G
Sbjct: 52  DYYHKYKENLPKYTTEELNFPG 73


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 110 RISLDLLHVFSFNYQYI 160
           RIS  L+H F   Y+Y+
Sbjct: 360 RISFILVHGFPLEYEYV 376


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,787
Number of Sequences: 438
Number of extensions: 3762
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)