Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12h02r
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    26   1.0  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            24   5.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   7.1  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   7.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   9.4  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 447 QGRQRAFRFRYFCSLVFIYCRIPHCAQIDWRFFKTHS 557
           + RQR  R      +VF++C  P+     W  F   S
Sbjct: 300 RARQRTLRLTITIVVVFVWCWTPYVVMTLWYMFDRES 336


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 191 PPGGVSNTTDGARHADAIRVPNRSETPP 108
           PP G   T  G +H+D  + P R  +PP
Sbjct: 201 PPKGAGAT--GTQHSDQQQEPPRPSSPP 226


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +3

Query: 63   YPS*LYIDAAFIVWWWWSLGSVWDTDGVSVSGSIGRIRDATR---WSSIRG 206
            Y +  + D++ +++W  S  S W T    V+  + +I++AT+   W  + G
Sbjct: 1117 YETFCWTDSSTVIYWLKSSPSRWKT---FVANRVSQIQNATKEFEWRHVPG 1164


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 93  FIVWWWWSLGSVWDTDGVS 149
           F++WW W   +   T GVS
Sbjct: 242 FVLWWGWLAFNSGSTYGVS 260


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 274 SERCSLRVRRLTFARQLKRAQEKNRRSQTYVPTMPIAK 387
           +ER  L   R ++    K  +EK  R QT    +P+ +
Sbjct: 503 TERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTR 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,717
Number of Sequences: 2352
Number of extensions: 14542
Number of successful extensions: 81
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)