Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12h02f
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    42   4e-06
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.35 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.46 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   5.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   5.7  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   5.7  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   5.7  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   5.7  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   5.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 41.9 bits (94), Expect = 4e-06
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = +2

Query: 308 VQVYSLKHNVISELDNFCFKESGYTALKLLDISYNLIFWIGLHAFSGLEKLIYLNLSNNR 487
           +QV  L HN + ELD   F+ +    L+ LD S+N I  I    F  L  L  ++ S+NR
Sbjct: 274 LQVLDLSHNSLYELDFDTFRNT--KKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNR 331

Query: 488 LRYIPSDLF 514
           LR +P +LF
Sbjct: 332 LRSLPDNLF 340



 Score = 40.7 bits (91), Expect = 9e-06
 Identities = 23/69 (33%), Positives = 40/69 (57%)
 Frame = +2

Query: 308 VQVYSLKHNVISELDNFCFKESGYTALKLLDISYNLIFWIGLHAFSGLEKLIYLNLSNNR 487
           +Q+Y L HN +       F    +  L++LD+S+N ++ +    F   +KL +L+ S+NR
Sbjct: 251 MQLY-LGHNKLLNATKDLFGNMPH--LQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNR 307

Query: 488 LRYIPSDLF 514
           +  IP+DLF
Sbjct: 308 ISEIPNDLF 316



 Score = 31.1 bits (67), Expect = 0.007
 Identities = 19/70 (27%), Positives = 35/70 (50%)
 Frame = +2

Query: 275 IIDINVGVSKAVQVYSLKHNVISELDNFCFKESGYTALKLLDISYNLIFWIGLHAFSGLE 454
           +  +++  ++ +    L  N IS L +   + + +  L  LD+SYN +  I    F G+ 
Sbjct: 360 LTSLSLASAQTLSELDLSWNSISSLSHGG-QLARFKCLSWLDLSYNRLGQIDAGTFKGIP 418

Query: 455 KLIYLNLSNN 484
           +L  LNL +N
Sbjct: 419 RLASLNLGHN 428



 Score = 29.9 bits (64), Expect = 0.016
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
 Frame = +2

Query: 299 SKAVQVYSLKHNVISELDNFCFKESGYTALKLLDISYNLIFWIGLHAF--SGLEKLIYLN 472
           +K +Q     HN ISE+ N  F+  G   L+++D S+N +  +  + F  +GLE+   L+
Sbjct: 295 TKKLQWLDTSHNRISEIPNDLFRFLG--NLRIVDFSHNRLRSLPDNLFRETGLER---LD 349

Query: 473 LSNNRLRYIP 502
           +S+N L  +P
Sbjct: 350 VSHNLLGKLP 359



 Score = 27.9 bits (59), Expect = 0.066
 Identities = 17/83 (20%), Positives = 40/83 (48%)
 Frame = +2

Query: 269 QNIIDINVGVSKAVQVYSLKHNVISELDNFCFKESGYTALKLLDISYNLIFWIGLHAFSG 448
           +N+ D +    ++++   L+ N I  +    F+   +  L  +  S+N +  +  H F+ 
Sbjct: 55  RNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFAD 114

Query: 449 LEKLIYLNLSNNRLRYIPSDLFL 517
           L +L  ++L +NR+  +    F+
Sbjct: 115 LIQLEQIHLDDNRIESLERRAFM 137



 Score = 27.1 bits (57), Expect = 0.12
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 449 LEKLIYLNLSNNRLRYIPSDLF 514
           L +L  L+LSNNRLR +P + F
Sbjct: 41  LNRLEELDLSNNRLRNVPDNSF 62



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 513 FWDTPQLEHLDLSSNVFESL 572
           F + P+LE LDL+ N   SL
Sbjct: 160 FQNLPELEDLDLAYNSISSL 179


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 154 VEVFYLYCILYFVCA 198
           V +F+L CI YF CA
Sbjct: 138 VPLFFLLCIYYFYCA 152



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 154 VEVFYLYCILYFVCAQ*VL 210
           + + +L CI YF CA  +L
Sbjct: 277 MHLLFLLCIYYFYCALIIL 295



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 154 VEVFYLYCILYFVCA 198
           V + +L CI +F CA
Sbjct: 158 VHLLFLLCIYHFFCA 172


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 21/84 (25%), Positives = 42/84 (50%)
 Frame = +2

Query: 236 SNGLNRAICVDQNIIDINVGVSKAVQVYSLKHNVISELDNFCFKESGYTALKLLDISYNL 415
           SN L+R   V + ++   +GV   +     +++V++ +      +   TA +L +I   L
Sbjct: 297 SNQLSREAKVTKTVL---LGVKIDICNEEERNSVVASVLQLMENKIEITACRLFNIDNAL 353

Query: 416 IFWIGLHAFSGLEKLIYLNLSNNR 487
           +F I   AFS L  ++  +L+N +
Sbjct: 354 LFAICGSAFSYLFIMLQFDLNNKK 377


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 16/66 (24%), Positives = 26/66 (39%)
 Frame = -2

Query: 313 LNSFGYSNVYIDNVLVNTNSPVQPIRHVTVTLFWTKLTEHKRNTKCNKDKKPQRHYL*SR 134
           LNS GY+     + + N NS ++ I    +   W +L E     +   D       L  +
Sbjct: 253 LNS-GYNLTTFGSFIFNANSAIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKNDKSLKRK 311

Query: 133 FHFKNC 116
           F+   C
Sbjct: 312 FYLTIC 317


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 267 STQIALFNPLDMSQSHCFGQNSLS 196
           S+  AL +P   S+S C G N+ S
Sbjct: 223 SSSSALESPNPASRSSCLGSNTSS 246


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -3

Query: 495 YLSLLLLRFK*INFSSPEKACNPIQNIKLYDIS 397
           YLS+ ++    + ++S ++  NP+ N KLY+ +
Sbjct: 329 YLSVFVIL---VYYASLDETPNPVTNGKLYNFN 358


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 4/26 (15%), Positives = 15/26 (57%)
 Frame = -2

Query: 289 VYIDNVLVNTNSPVQPIRHVTVTLFW 212
           +YI  +++ T + ++ + +  + + W
Sbjct: 229 IYIQVIVIGTKNTIETVAYSVIFILW 254


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 44  HFNVKTLEHDYNKRKGRLIKKMRVTIFKV 130
           H   + L  D   +KG LI K  +TI  +
Sbjct: 63  HLISRALGEDVRTQKGYLIPKDTITIIHI 91


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 292 NVYIDNVLVNTNSPVQPI 239
           NVY  N+  +TN   QP+
Sbjct: 59  NVYTKNLRTDTNRITQPV 76


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 267 STQIALFNPLDMSQSHCFGQNSLS 196
           S+  AL +P   S+S C G N+ S
Sbjct: 12  SSSSALESPNPASRSSCLGSNTSS 35


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 267 STQIALFNPLDMSQSHCFGQNSLS 196
           S+  AL +P   S+S C G N+ S
Sbjct: 12  SSSSALESPNPASRSSCLGSNTSS 35


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 267 STQIALFNPLDMSQSHCFGQNSLS 196
           S+  AL +P   S+S C G N+ S
Sbjct: 223 SSSSALESPDPASRSSCLGSNTSS 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,589
Number of Sequences: 336
Number of extensions: 2718
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)