Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12h01r
(686 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 7e-22
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 89 4e-18
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 85 7e-17
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 68 6e-12
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 50 2e-06
SB_40597| Best HMM Match : Dynein_heavy (HMM E-Value=0.55) 43 3e-04
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 36 0.031
SB_30437| Best HMM Match : Casein_kappa (HMM E-Value=9.5) 35 0.071
SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26) 35 0.071
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_49668| Best HMM Match : S-antigen (HMM E-Value=1.6e-08) 33 0.29
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9) 32 0.38
SB_40482| Best HMM Match : S-antigen (HMM E-Value=1.4e-05) 32 0.50
SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_40390| Best HMM Match : BON (HMM E-Value=0.68) 31 1.2
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 31 1.2
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 31 1.2
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_55766| Best HMM Match : Keratin_B2 (HMM E-Value=1.8) 30 2.0
SB_44525| Best HMM Match : S-antigen (HMM E-Value=8e-06) 30 2.0
SB_27898| Best HMM Match : S-antigen (HMM E-Value=0.035) 30 2.0
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 30 2.0
SB_2096| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_33587| Best HMM Match : SAMP (HMM E-Value=2.7) 29 2.7
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_20908| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.053) 29 2.7
SB_23463| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 29 3.5
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 29 4.7
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_45921| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5) 29 4.7
SB_3274| Best HMM Match : Pkinase (HMM E-Value=0.96) 29 4.7
SB_49238| Best HMM Match : Metallothionein (HMM E-Value=2.8) 28 6.2
SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026) 28 6.2
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 6.2
SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26) 28 6.2
SB_36942| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_47665| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_46264| Best HMM Match : rve (HMM E-Value=1.9e-16) 28 8.1
SB_28628| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14) 28 8.1
SB_4451| Best HMM Match : Cornifin (HMM E-Value=0.11) 28 8.1
SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 28 8.1
SB_51035| Best HMM Match : Extensin_2 (HMM E-Value=0.33) 28 8.1
SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 28 8.1
SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_25685| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_3220| Best HMM Match : Ion_trans (HMM E-Value=5.6e-22) 28 8.1
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 101 bits (241), Expect = 7e-22
Identities = 66/173 (38%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Frame = -3
Query: 639 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHL 460
IR AL+ D NVI DW A Y A VG + + +L N G +L
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYL 691
Query: 459 IGFSLGAHVVGNAGR---QAGGRPNRVTGLDPAGPRW--GGNNQALNRNAGAYVEAIHTD 295
+GFSLGAH+ G GR + G + NR+TGLDPA + + L+ + +V+ +HTD
Sbjct: 692 VGFSLGAHISGYVGRRIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTD 751
Query: 294 GGLLGIFDRIAHGDFYPNGGRNPQPGCR--------VSTCSHSRAYELYASTV 160
L G H DFYPNGG+ QPGCR C H RA E YA +V
Sbjct: 752 MDLAGTPTVSGHIDFYPNGGKK-QPGCRDLLDGPINYVICDHMRAPEYYAESV 803
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 88.6 bits (210), Expect = 4e-18
Identities = 62/169 (36%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Frame = -3
Query: 627 LLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFS 448
LL D NVI+VDW A + AV VG L L G VH+IGFS
Sbjct: 138 LLWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIGFS 197
Query: 447 LGAHVVGNAGR---QAGGRPNRVTGLDPAGPRWGGNNQ--ALNRNAGAYVEAIHTDGGLL 283
GAHV G GR + G +R+T LDPA + +++ L+ + +V+ IHT
Sbjct: 198 FGAHVAGYVGRRMKKRGRMIDRITALDPAAMWFHKHHEDVRLDTSDALFVDVIHTSAD-Y 256
Query: 282 GIFDRIAHGDFYPNGGRNPQPGC--------RVSTCSHSRAYELYASTV 160
GI I H DFYPNGG+ QPGC C H RA L+ +++
Sbjct: 257 GITSTIGHADFYPNGGKK-QPGCDNFFRGFSSYLFCGHKRAPALFTTSL 304
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 84.6 bits (200), Expect = 7e-17
Identities = 58/148 (39%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Frame = -3
Query: 639 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLIN-NGGGNWGRVH 463
++ LL SD NVI+VDW A Y AV VG + F+ +++ +G G H
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFH 174
Query: 462 LIGFSLGAHVVGNAG---RQAGGRPNRVTGLDPAGPRWGGN--NQALNRNAGAYVEAIHT 298
IGFSLGAH+ G G ++ G +R+TGLDPA + G + L+R +V+ IHT
Sbjct: 175 SIGFSLGAHISGYVGQRLKRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHT 234
Query: 297 DGGLLGIFDRIAHGDFYPNGGRNPQPGC 214
+ GI H DFYPNGG + Q GC
Sbjct: 235 -SYVFGITAPHGHMDFYPNGGTS-QRGC 260
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 68.1 bits (159), Expect = 6e-12
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = -3
Query: 684 VHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGL--YNTAVNGVPSVGQFLGNF 511
+HG+ +GN + ++R LL NVI VDW+ A+GL Y+ A VG L
Sbjct: 29 IHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQLAEL 88
Query: 510 LVWLINNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNRVT 385
+ + + RVHLIG SLGAHV G AG + G+ R+T
Sbjct: 89 ITTIQRVFDFDLRRVHLIGHSLGAHVAGYAGERLSGKVGRIT 130
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Frame = -3
Query: 381 LDPAGPRWGGNNQ--ALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQPGCR- 211
LDPAG + + L+ + +V+ +HTD G + H DFYPNGG+N QPGCR
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTDMDFAGTSTQSGHIDFYPNGGKN-QPGCRD 60
Query: 210 -------VSTCSHSRAYELYASTV 160
C H RA++ + ++
Sbjct: 61 IADGPSNALKCDHVRAHDYFTESI 84
>SB_40597| Best HMM Match : Dynein_heavy (HMM E-Value=0.55)
Length = 403
Score = 42.7 bits (96), Expect = 3e-04
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Frame = +1
Query: 112 SLIEVVT*SANETIVTNSGGVQFVGSTVRAGTNS--ATR-LGVSATVGVKVTMSNAVKNT 282
+L+ T AN + TN+ G + +T GTNS AT +G + + +N++ T
Sbjct: 53 TLLATNTVGANTLVATNTVGANTLLATNTVGTNSLVATNTVGANTLLATNTVGANSLLAT 112
Query: 283 EKTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQ 462
TVG + L ++ V LV T G + + N VG A SL ++ T + N
Sbjct: 113 --NTVGANSLVATNTVGANSLVATNTVGANTLVATNTVG-ANSLVATNTVGANSLVATNT 169
Query: 463 VDSTPIAASVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNV 606
V++ + A+ + VA + + + TVG + V N V
Sbjct: 170 VNAHTLLATNTVSANSLVATNTVGANSLVATN---TVGANSLVATNTV 214
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Frame = +1
Query: 130 T*SANETIVTNSGGVQFVGSTVRAGTNS--ATR-LGVSATVGVKVTMSNAVKNTEKTTVG 300
T +AN + TN+ G + +T GTNS AT +G ++ V +N + T TVG
Sbjct: 4 TVNANTLVATNTVGANTLLATNTVGTNSLVATNTVGANSLVATNTVGANTLLAT--NTVG 61
Query: 301 VDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPI 480
+ L ++ V L+ T G + + N VG+ T L+++ T + N V + +
Sbjct: 62 ANTLVATNTVGANTLLATNTVGTNSLVATNTVGANTLLATN-TVGANSLLATNTVGANSL 120
Query: 481 AAS 489
A+
Sbjct: 121 VAT 123
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Frame = +1
Query: 112 SLIEVVT*SANETIVTNSGGVQFVGSTVRAGTNS--ATR-LGVSATVGVKVTMSNAVKNT 282
+L+ T AN + TN+ G + +T G NS AT +G + + +N + T
Sbjct: 9 TLVATNTVGANTLLATNTVGTNSLVATNTVGANSLVATNTVGANTLLATNTVGANTLVAT 68
Query: 283 EKTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQ 462
TVG + L ++ V LV T G + + N VG A SL ++ T + N
Sbjct: 69 --NTVGANTLLATNTVGTNSLVATNTVGANTLLATNTVG-ANSLLATNTVGANSLVATNT 125
Query: 463 VDSTPIAAS 489
V + + A+
Sbjct: 126 VGANSLVAT 134
Score = 39.1 bits (87), Expect = 0.003
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +1
Query: 112 SLIEVVT*SANETIVTNSGGVQ--FVGSTVRAGTNSATR-LGVSATVGVKVTMSNAVKNT 282
SL+ T AN + TN+ G +TV A T AT +G + + +N++ T
Sbjct: 31 SLVATNTVGANSLVATNTVGANTLLATNTVGANTLVATNTVGANTLLATNTVGTNSLVAT 90
Query: 283 EKTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQ 462
TVG + L ++ V L+ T G + + N VG A SL ++ T N
Sbjct: 91 --NTVGANTLLATNTVGANSLLATNTVGANSLVATNTVG-ANSLVATNTVGANTLVATNT 147
Query: 463 VDSTPIAAS 489
V + + A+
Sbjct: 148 VGANSLVAT 156
Score = 37.9 bits (84), Expect = 0.008
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Frame = +1
Query: 112 SLIEVVT*SANETIVTNSGGVQFVGSTVRAGTNSATRLG-VSATVGVKVTMSNAVKNTEK 288
SL+ T AN + TN+ G + +T G NS V A V NA
Sbjct: 119 SLVATNTVGANSLVATNTVGANTLVATNTVGANSLVATNTVGANSLVATNTVNAHTLLAT 178
Query: 289 TTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQV 465
TV + L ++ V LV T G + + N VG A SL ++ T + N V
Sbjct: 179 NTVSANSLVATNTVGANSLVATNTVGANSLVATNTVG-ANSLVATNTVGANSLVATNTV 236
Score = 35.1 bits (77), Expect = 0.054
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = +1
Query: 112 SLIEVVT*SANETIVTNSGGVQFV--GSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTE 285
+L+ T AN + TN+ G + +TV A T AT VSA V A
Sbjct: 141 TLVATNTVGANSLVATNTVGANSLVATNTVNAHTLLATNT-VSANSLVATNTVGANSLVA 199
Query: 286 KTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVT 429
TVG + L ++ V LV T G + + N VG+ + + T
Sbjct: 200 TNTVGANSLVATNTVGANSLVATNTVGANSLVATNTVGARQNFARKYT 247
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 37.5 bits (83), Expect = 0.010
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Frame = +2
Query: 353 PPHLGPAGSKPV--TLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRN 526
PP +GPA P + LG PP+ P P P P P PPP+ + P
Sbjct: 2151 PPPMGPARHSPSGPSPLGAPPSVPP--PMGAPPSGPPPMGAPPSGPPPMGTPPSGHPPMG 2208
Query: 527 CPTLGTPLTAVLYRPLARPRQSTTITLQSETASKAGR 637
P +G P + + P R S T ++S K R
Sbjct: 2209 APPMGPPPSG-SHSPAPRGTISQTCFMKSRIIDKRYR 2244
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -3
Query: 681 HGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVG 529
HG+ +G+++ +R ALL D NV++ DW A+G+Y A VG
Sbjct: 109 HGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADGMYWQATANTRLVG 159
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 35.9 bits (79), Expect = 0.031
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = -1
Query: 305 STPTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVT 126
++PT+ F T LLMVT +P + T +A P L V + PP TI LA T
Sbjct: 37 TSPTIPFLATTTPLLMVTTSPLPSPTIPFLATTTPLLMVTTSTLPPP---TIPFLA--TT 91
Query: 125 TSIRLRTISALEVPSTWVMPYLVS 54
T + + T S L P+ +P+L +
Sbjct: 92 TPLLMVTTSPLPSPT---IPFLAT 112
Score = 34.7 bits (76), Expect = 0.071
Identities = 29/83 (34%), Positives = 41/83 (49%)
Frame = -1
Query: 302 TPTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTT 123
+PT+ F T LLMVT +P + T +A P L V + PP TI LA TT
Sbjct: 104 SPTIPFLATTTPLLMVTTSPLPSPTIPFLATTAPLLMVTTSPLPPP---TIPFLA--TTT 158
Query: 122 SIRLRTISALEVPSTWVMPYLVS 54
+ + T S L P+ +P+L +
Sbjct: 159 PLLMVTTSPLPPPT---IPFLAT 178
Score = 34.3 bits (75), Expect = 0.094
Identities = 47/135 (34%), Positives = 54/135 (40%), Gaps = 18/135 (13%)
Frame = +2
Query: 233 LPPLG*KSP*AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGP--AGSKP---VTLL 397
+P L +P M + P PP++ +T P L LPP P A + P VT
Sbjct: 129 IPFLATTAPLLMVTTSPLPPPTIPFLATTTPLLMVTTSPLPPPTIPFLATTTPLLMVTTS 188
Query: 398 GLPPACRPALPTTCAPKLKPIKWTRPQLPPP----------LLMSQTKKL-PRNCPTLGT 544
LPP P L TT P L T LPPP LLM T L P P L T
Sbjct: 189 PLPPPTIPFLATT-TPLLMV---TTSPLPPPTIPFLATTTSLLMVTTSPLPPPTIPFLAT 244
Query: 545 --PLTAVLYRPLARP 583
PL V PL P
Sbjct: 245 TAPLLMVTTSPLPTP 259
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = -1
Query: 299 PTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTS 120
PT+ F T LLMVT +P T +A P L V + PP TI LA TT
Sbjct: 149 PTIPFLATTTPLLMVTTSPLPPPTIPFLATTTPLLMVTTSPLPPP---TIPFLA--TTTP 203
Query: 119 IRLRTISALEVPSTWVMPYLVS 54
+ + T S L P+ +P+L +
Sbjct: 204 LLMVTTSPLPPPT---IPFLAT 222
Score = 32.3 bits (70), Expect = 0.38
Identities = 28/82 (34%), Positives = 39/82 (47%)
Frame = -1
Query: 299 PTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTS 120
PT+ F T LLMVT +P + T +A P L V + P TI LA TT
Sbjct: 17 PTIPFLAATTPLLMVTTSPLTSPTIPFLATTTPLLMVTTSPLPSP---TIPFLA--TTTP 71
Query: 119 IRLRTISALEVPSTWVMPYLVS 54
+ + T S L P+ +P+L +
Sbjct: 72 LLMVTTSTLPPPT---IPFLAT 90
Score = 31.5 bits (68), Expect = 0.66
Identities = 28/82 (34%), Positives = 39/82 (47%)
Frame = -1
Query: 299 PTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTS 120
PT+ F T+LLMVT +P T +A P L V + P TI LA TT
Sbjct: 215 PTIPFLATTTSLLMVTTSPLPPPTIPFLATTAPLLMVTTSPLPTP---TIPFLA--TTTP 269
Query: 119 IRLRTISALEVPSTWVMPYLVS 54
+ + T S L P+ +P+L +
Sbjct: 270 LLIVTTSTLPPPT---IPFLAT 288
Score = 31.1 bits (67), Expect = 0.87
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 5/110 (4%)
Frame = +2
Query: 233 LPPLG*KSP*AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLL----- 397
+P L +P M + P PP++ +T P L LPP P + +LL
Sbjct: 173 IPFLATTTPLLMVTTSPLPPPTIPFLATTTPLLMVTTSPLPPPTIPFLATTTSLLMVTTS 232
Query: 398 GLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTP 547
LPP P L TT AP L P P L + T L TL P
Sbjct: 233 PLPPPTIPFLATT-APLLMVTTSPLPTPTIPFLATTTPLLIVTTSTLPPP 281
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/82 (32%), Positives = 38/82 (46%)
Frame = -1
Query: 299 PTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTS 120
PT+ F T LLMVT +P + T +A P L V + P TI LA T
Sbjct: 83 PTIPFLATTTPLLMVTTSPLPSPTIPFLATTTPLLMVTTSPLPSP---TIPFLA--TTAP 137
Query: 119 IRLRTISALEVPSTWVMPYLVS 54
+ + T S L P+ +P+L +
Sbjct: 138 LLMVTTSPLPPPT---IPFLAT 156
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/82 (32%), Positives = 37/82 (45%)
Frame = -1
Query: 299 PTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTS 120
PT+ F T LLMVT +P T +A L V + PP TI LA T
Sbjct: 193 PTIPFLATTTPLLMVTTSPLPPPTIPFLATTTSLLMVTTSPLPPP---TIPFLA--TTAP 247
Query: 119 IRLRTISALEVPSTWVMPYLVS 54
+ + T S L P+ +P+L +
Sbjct: 248 LLMVTTSPLPTPT---IPFLAT 266
>SB_30437| Best HMM Match : Casein_kappa (HMM E-Value=9.5)
Length = 179
Score = 34.7 bits (76), Expect = 0.071
Identities = 34/120 (28%), Positives = 51/120 (42%)
Frame = +1
Query: 112 SLIEVVT*SANETIVTNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKT 291
SL+ T +AN + TN+ S V T A L + TVG ++
Sbjct: 70 SLVATNTVNANSLVATNTVS---ANSLVATNTVGANTLVATNTVGANTLVAT-------N 119
Query: 292 TVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDS 471
TVG + L ++ V LV T G + + N VG A SL ++ T N + N V++
Sbjct: 120 TVGANTLLTTNTVNGNSLVATNTVGANSLVATNTVG-ANSLVATNTVNGNSLVATNTVNA 178
>SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)
Length = 351
Score = 34.7 bits (76), Expect = 0.071
Identities = 31/197 (15%), Positives = 73/197 (37%), Gaps = 1/197 (0%)
Frame = -1
Query: 632 PPCWPSPTATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVEST*LA 453
PP WP P T+ + + + T +M ++ + T + T + +
Sbjct: 154 PPPWPRPCITVNMTMTMTMTMTMTMTMTMTMTMTMTMTMTMTMTMTMTMTMTMTMTMTMT 213
Query: 452 SAWARTLSVTLDDRLVADPTGLPVWIRLXXXXXXXXXXXXXTQELMWRQSTPTVVFSVFL 273
T+++T+ + T + + + + M T T+ ++ +
Sbjct: 214 MTMTMTMTMTMTMTMTMTMT-MTMTMTMTMTMTMTMTITITITMTMTMTMTMTITITITI 272
Query: 272 TALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTI-VSLADYVTTSIRLRTISA 96
T + +T T T+ T + +T+ T T + +TI +++ +T +I +
Sbjct: 273 TMTMTMTMTMTMTMTMTMTMTMTMTMTITIT-ITITITITITITITITITITITITITIT 331
Query: 95 LEVPSTWVMPYLVSAET 45
+ + T M ++ T
Sbjct: 332 MTMTMTMTMTITITTST 348
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +1
Query: 265 NAVKNTEK-TTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVR 441
NA N++ TTV T T P + + TG P+G+ T + + +
Sbjct: 43 NATTNSQNITTVAPITTMAPDTTTAAPFTTTIAPATTALPTGTPIGTPTGIPTGILTGTA 102
Query: 442 AQAEANQVDSTPIAASVVDE 501
+QA + TP A+VV +
Sbjct: 103 SQATPS---GTPTGAAVVTD 119
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 353 PPHLGPAGSK-PVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPP 487
PP PA + P + PP RP P P KP K T+P LPP
Sbjct: 781 PPPTKPATPRVPPNIPSRPPGARPTPPPP--PPGKPTKPTKPSLPP 824
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Frame = +2
Query: 356 PHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRN-CP 532
P P +KP P P PT+ AP P P P +QT P P
Sbjct: 20 PQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTT---PTPTTPSPTAPTQTTPTPATPTP 76
Query: 533 TLGTPLTAV-LYRPLARPRQSTTIT 604
T TP T L +P +TT T
Sbjct: 77 TTPTPKTPTPTTSTLTKPTPATTPT 101
>SB_49668| Best HMM Match : S-antigen (HMM E-Value=1.6e-08)
Length = 531
Score = 32.7 bits (71), Expect = 0.29
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISSCVTV 336
TNS +Q ST GTNS G ++T ++ T S A++ T T L ++ +
Sbjct: 336 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNST-----ALQGTNSTAL 389
Query: 337 QGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVV-DEPDQK 513
QG T G + T ++T+L T++ Q + V P SVV DE Q+
Sbjct: 390 QGTNSTALQGTN--STALQGTNSTALQG--TNSTTLQGHCDHVAKVPWPVSVVIDEACQR 445
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 168 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 213
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 192 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 237
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 216 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 261
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 240 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 285
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 264 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 309
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 288 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 333
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 312 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 357
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +2
Query: 350 LPPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIK---WTRPQLPP 487
LPP + P P +PP C P P C+ L P P LPP
Sbjct: 753 LPPKVTPKPPAPPQFAPVPPPCAPIPPMPCSAPLPPAPAPFSAAPHLPP 801
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 32.3 bits (70), Expect = 0.38
Identities = 27/78 (34%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +2
Query: 356 PHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNC-P 532
P L P T L PPA PT C + P RP +PPP LPR C P
Sbjct: 29 PLLRPCAPPLATALSPPPATA-LCPTPCYGPV-PHPLLRPCVPPPATALVPHPLPRPCAP 86
Query: 533 TLGTPLTAV-LYRPLARP 583
T L Y P+ P
Sbjct: 87 PPATALCPTPCYGPVPHP 104
>SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9)
Length = 334
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 383 PVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPL-LMSQTKKLPRNCPTLGTPLTAV 559
P++LL P P +PT+ + + + P PPP+ L + + P + T L
Sbjct: 246 PISLLPYPYKPLPRIPTSRSLESLQAAPSNPYKPPPIPLRASPSYSYKPLPRIPTSLIPY 305
Query: 560 LYRPLARPRQSTTITLQSETAS 625
Y+PL PR +T+ L S AS
Sbjct: 306 PYKPL--PRTATSRYLVSLQAS 325
>SB_40482| Best HMM Match : S-antigen (HMM E-Value=1.4e-05)
Length = 269
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T TT+
Sbjct: 222 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTTL 267
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 30 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 75
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 54 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 99
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 78 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 123
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 102 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 147
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 126 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 171
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 150 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 195
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 174 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 219
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 198 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 243
>SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1189
Score = 31.5 bits (68), Expect = 0.66
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -1
Query: 284 SVFLTAL-LMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTSIRLR 108
SV+ T + L T PT A+TP + L P T TPP T +++ R
Sbjct: 468 SVYKTGVPLPTTRLPTTAQTPTTI--LPPTTTP-----TPPPTTTEPQRPPDPPRNVQAR 520
Query: 107 TISALEVPSTWVMP 66
TIS E+ TW+ P
Sbjct: 521 TISDSEIEVTWIPP 534
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.1 bits (67), Expect = 0.87
Identities = 22/58 (37%), Positives = 26/58 (44%)
Frame = -3
Query: 495 NNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNAG 322
NNGG N G + G + G + N G GG N G + G GGNN N N G
Sbjct: 469 NNGGNNNGGNNNGGNNNGGN--NNGGNNNGGNNN---GENNGGNNNGGNNNGGNNNGG 521
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -3
Query: 495 NNGGGNWGRVHLIGFSLGAHVVGN--AGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNAG 322
NN GGN G + G + G + GN G GG N G + G GGNN N N G
Sbjct: 430 NNNGGNNGGNNNGGNTGGDNNGGNNYGGNNNGGNNN--VGNNNGGNNNGGNNNGGNNNGG 487
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -3
Query: 495 NNGGGNWGRVHLIGFSLGAHVVG--NAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNAG 322
NNGG N G + G + G + G N G GG N G + G GGNN N N G
Sbjct: 474 NNGGNNNGGNNNGGNNNGGNNNGGNNNGENNGGNNNG--GNNNGGNNNGGNNNGGNNNGG 531
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 495 NNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPN-RVTGLDPAGPRWGGNN 346
NN GGN G G + G + GN G GG N TG + G GGNN
Sbjct: 559 NNNGGNTG-----GNNNGGNTGGNNGGNTGGNNNGGNTGGNNNGGNTGGNN 604
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 495 NNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPN-RVTGLDPAGPRWGGNN 346
NN GGN G G + G + GN G GG N TG + G GGNN
Sbjct: 585 NNNGGNTG-----GNNNGGNTGGNNGGNTGGNNNGGNTGGNNNGGNTGGNN 630
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
Frame = -3
Query: 495 NNGGGNWGRVHLIGFSLGAHVVGNA-GRQAGGRPNRVTGLDPAGPRWGGNNQALNR--NA 325
N GG N G G + G + GN G GG TG + G GGNN N N
Sbjct: 573 NTGGNNGGNTG--GNNNGGNTGGNNNGGNTGGNNGGNTGGNNNGGNTGGNNNGGNTGGNN 630
Query: 324 GAYVEAIHTDGGLLGIFDRIAHGDFYPNGGR 232
G + G G P GG+
Sbjct: 631 GGNTGGNNNGGNSGGSNSHSGEVTIQPGGGQ 661
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 486 GGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAG 367
G N + HL G S+G H+VG Q R V + PAG
Sbjct: 128 GVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPAG 167
>SB_40390| Best HMM Match : BON (HMM E-Value=0.68)
Length = 561
Score = 30.7 bits (66), Expect = 1.2
Identities = 31/104 (29%), Positives = 38/104 (36%), Gaps = 10/104 (9%)
Frame = +2
Query: 356 PHLGPAGSKPVTLLGLPPACRPALPTTC--------APKLKPIKWTRPQLPPPLLMSQTK 511
P GP+ P T L P RP PT C A L P RP PP L +
Sbjct: 106 PCYGPSAKPPATALVPNPLLRPQCPTPCYGPSAQPPATGLVPNPLLRPYAPP--LATALV 163
Query: 512 KLPRNCPTLGTPLTAVLYRP--LARPRQSTTITLQSETASKAGR 637
P P TP + +P A PR I +S + + R
Sbjct: 164 PNPLLQPQCPTPCYCLSAQPPATALPRDKWAIGHESSSVMSSKR 207
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +2
Query: 377 SKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLT- 553
S P T + P+ P+T + + P + P P L M T +P T TP T
Sbjct: 175 SAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTP 234
Query: 554 AVLYRPLARPRQSTTIT 604
+ L P+ ST T
Sbjct: 235 STLSTPITPSTPSTPST 251
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +2
Query: 377 SKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLT- 553
S P T + P+ P+T + + P + P P L M T +P T TP T
Sbjct: 725 SAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTP 784
Query: 554 AVLYRPLARPRQSTTIT 604
+ L P+ ST T
Sbjct: 785 STLSTPITPSTPSTPST 801
>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = -1
Query: 254 TFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTSIRLRTISALEVPSTW 75
T PT P + +VP TVEPT+ P T+V + V TS + S +E P+T
Sbjct: 148 TVEPTSTVVPT--STVVPTSTVEPTSTVEPT-STVVPTSTVVPTS-TVEPTSTVE-PTTM 202
Query: 74 VMPYLVSAETESTDSEL 24
+ P S + + SE+
Sbjct: 203 MAPTTESPTSSRSTSEV 219
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 486 GGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAG 367
G N + HL G S+G H+VG Q R V + PAG
Sbjct: 6 GVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPAG 45
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 30.7 bits (66), Expect = 1.2
Identities = 40/123 (32%), Positives = 49/123 (39%), Gaps = 14/123 (11%)
Frame = +2
Query: 281 PRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPAL---PTTCAPKL 451
P PS S +P+ PP L P S P+ L PP + PTT P L
Sbjct: 580 PSYSPSSPSYSPSSPSFHHNLRPTPPPL-PL-SIPLLLQATPPHLQSTAQPRPTT-VPPL 636
Query: 452 KPIKWTRPQLPPPLL---MSQTKKLPRNCPTL----GTPLTAVLYRP----LARPRQSTT 598
P R PPPLL + LP PT+ TPL + P +PRQST
Sbjct: 637 PPTPPPRQSTPPPLLLIPLLPLLTLPLPPPTVRHPQATPLPRLATHPPPLSTPQPRQSTA 696
Query: 599 ITL 607
+ L
Sbjct: 697 LPL 699
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +2
Query: 374 GSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLT 553
G+ + L PA RP P P + T+P +PPP L K + +C ++ P
Sbjct: 182 GNSHLNTLPPVPAHRPPQPVDVLPPPPKLAKTKP-VPPPRL-QVPKSILNDCESV-IPSK 238
Query: 554 AVLYRPLARPRQSTTITLQSETASKAG 634
L L+R + +T+ +S + +G
Sbjct: 239 PDLTGTLSRQNKHSTVKEESHAQNSSG 265
>SB_55766| Best HMM Match : Keratin_B2 (HMM E-Value=1.8)
Length = 245
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/125 (21%), Positives = 47/125 (37%)
Frame = +1
Query: 184 GSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISSCVTVQGLVVTTPP 363
G T R T S+T + V T + NT ++ +D I +C T T
Sbjct: 117 GPTNRCTTTSSTTISVGPTNSCTNVKDST--NTSGSSTTIDVCPIITCTTTSSCCTTF-- 172
Query: 364 GPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGN 543
G+P T+ S T N + + S+P + D +++ +++
Sbjct: 173 ------NGSPTIIGTTSGSPTTSNSPNISNGPTISSSPTTSGSPTISDSPISRPVTNCKP 226
Query: 544 SIDGS 558
+I GS
Sbjct: 227 AISGS 231
>SB_44525| Best HMM Match : S-antigen (HMM E-Value=8e-06)
Length = 264
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 2 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 47
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 26 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 71
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 50 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 95
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 74 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 119
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 98 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 143
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 122 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 167
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 146 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 191
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 170 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 215
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 194 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 239
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKT 291
TNS +Q ST GTNS G ++T ++ T S A++ T T
Sbjct: 218 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNST 261
>SB_27898| Best HMM Match : S-antigen (HMM E-Value=0.035)
Length = 185
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 2 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 47
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 26 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 71
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 50 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 95
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 74 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 119
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 98 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 143
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 157 TNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTV 297
TNS +Q ST GTNS G ++T ++ T S A++ T T +
Sbjct: 122 TNSTALQGTNSTALQGTNSTALQGTNST-ALQGTNSTALQGTNSTAL 167
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/67 (34%), Positives = 29/67 (43%)
Frame = +2
Query: 290 PPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWT 469
PP + I PA+ F + PP +GP P L+ P A P P T L P
Sbjct: 364 PPIIPIPPPAMPAM-FNPHVPPPMIGPVTVPPPPLIPPPQASIP--PPTMIQTLPP---- 416
Query: 470 RPQLPPP 490
P +PPP
Sbjct: 417 -PSVPPP 422
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +1
Query: 79 VEGTSRALIVLSLIEVVT*SANETIVTNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVT 258
V T+ A + + T +A T T S +TV +AT V+ATV T
Sbjct: 166 VTATATATVTAAATATATATATATATTTSTATVTATATVTVTATAATT--VTATVTAATT 223
Query: 259 MSNAVKNTEKTTVGVD-CLHISSCVTVQGLVVTT 357
++ V T TTV V +++ VT V T
Sbjct: 224 VTVTVTATAATTVTVTVTATVTATVTATVTVTAT 257
>SB_2096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +2
Query: 368 PAGSKPVTLLGLPPACRPALPTTCAPKLKPI--KWTRPQLPPPLLMSQTKKLPRNCPTLG 541
P + V ++ PP+ P+ P L+P+ P + P S T R +
Sbjct: 1 PLATPSVLIMATPPSPAPSYAQCSHPWLRPLHQPLATPSVLTPGYASSTNPWLR---PVS 57
Query: 542 TPLTAVLYRPLARPRQST 595
+PL L++PL P ST
Sbjct: 58 SPLVTPLHQPLVTPPSST 75
>SB_33587| Best HMM Match : SAMP (HMM E-Value=2.7)
Length = 488
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 404 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGT 544
PPA +P L + PK+ I+ PPP L+ + +PRN T T
Sbjct: 437 PPAYKPQLKES--PKVNRIRDAHLLRPPPPLVRVAEDVPRNTDTSPT 481
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 320 APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPP 487
A + FRA + P PA S P+ PP + ALP AP + P + T P
Sbjct: 1762 ASSASFRAQTVAPITQPALSSPLVAQSAPPNSQAALPV--APVIPPAQSTTQASQP 1815
>SB_20908| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.053)
Length = 576
Score = 29.5 bits (63), Expect = 2.7
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Frame = +1
Query: 97 ALIVLSLIEVVT*SANETIVTNS-GGVQF-VGSTVRAGTNSATRLGVSATVGVKVTMSNA 270
A +V I V T+V N+ V+ V +TV + +S LGV+ATV +S A
Sbjct: 327 ATVVFKAISTVGLGMAATVVFNAISTVELGVAATVVSKASSTVELGVAATV-----VSKA 381
Query: 271 VKNTEKTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQA 450
+ +GV +S ++ GL V + I T +G A ++ S + V
Sbjct: 382 IST---VGLGVAATVVSKAISTVGLGVAATVVFNAISTVE-LGVAATVVSKASSTVELGV 437
Query: 451 EANQVDSTPIAASVVDEPDQKVAKELSDTGNSIDGSVV 564
A V S I+ + V+K +S G + +VV
Sbjct: 438 AATVV-SKAISTVGLGVAATVVSKAISTVGLGMAATVV 474
>SB_23463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 29.5 bits (63), Expect = 2.7
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Frame = +1
Query: 136 SANETI-VTNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCL 312
S N+T+ V N G + S V A T S LG ATV T ++ T T
Sbjct: 801 SFNQTLFVVNEGDPHCLYSLVAATTRSTLTLGKEATVSSLNTRLSSTPGT-ATVADYTLA 859
Query: 313 HISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASV 492
+ +S G+ TT + T V + T+ S V+ + A E N +D S+
Sbjct: 860 NDTSLTCAPGVTTTT----FSVPTVQDVMAETTESFIVSISANA-GEPNFIDRV-ATVSI 913
Query: 493 VDEPDQ 510
+D D+
Sbjct: 914 IDTVDK 919
>SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = +3
Query: 225 GGFCHRWGKSHHEQCGQ----KYREDHRRCG 305
GG C R+G H QC + K+ E+H CG
Sbjct: 256 GGLCSRFGTQHSCQCARGYSGKHCEEHSPCG 286
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 510 LVWLINNGGGNW-GRVHLIGFSLGAHVVGNAGRQAGGRPNRVTGL 379
LV +N GN +IGFSLG HV G AG R TGL
Sbjct: 4 LVKFLNKQTGNTPSSFTVIGFSLGGHVAG----YAGSRIKNTTGL 44
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 352 TTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQ----AEANQVDSTPIAASVVDEPDQ 510
TTPP R +G+ VGS+ + SS V+ Q +E VDST S ++PDQ
Sbjct: 515 TTPPQQPRPDSGDAAVGSSETESSEVSSGKPEQKTDGSEDGAVDSTQSPDSKPNKPDQ 572
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +2
Query: 404 PPACRPALPTTCAPKLKPIKWTR---PQLPPPLLMSQTKKLPRNCPTLGTPL--TAVLYR 568
PP+ +P++P K P +R P LPPP + P P +G P+ A++ R
Sbjct: 246 PPSVKPSVPIPPPTKPPPRVASRRPPPPLPPPDSSEAQAQQPPLSPPVGKPVVPAALMNR 305
Query: 569 PLARPRQ 589
P R+
Sbjct: 306 PTRGERR 312
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 356 PHLGPAGSKPVTLLGLPPACRPALPTTC-APKLKP 457
P GP+ P T L P RP PT C P +P
Sbjct: 436 PCFGPSAPPPATALVPNPLLRPQCPTPCYGPSAQP 470
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 28.7 bits (61), Expect = 4.7
Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 3/106 (2%)
Frame = +1
Query: 340 GLVVTTPPGPS---RIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQ 510
G TTP S I T NP GS ++ + SVT + + TP P+
Sbjct: 880 GPTTTTPISTSAAPEITTANP-GSPSTTTKSVT----TPQTSPKTPQTPATLPTTQTPEP 934
Query: 511 KVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADHGV 648
K + T G + + P + G+G GG+ G+
Sbjct: 935 GTEKTMPTTATPGTGQPTTPLTTSVPSDRSTEQQGEGLSGGSIGGI 980
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 374 GSKPVTLLGLPPACRPAL-PTTCAPKLKPIKWTRPQLPPP 490
G K + +P +C PA P CAP P P PPP
Sbjct: 78 GDKKCDVSCMPTSCAPACPPACCAPPPPPPPPPPPPPPPP 117
>SB_45921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -1
Query: 230 TPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTSIRLRTISAL---EVPSTWV 72
TPN +A L P +T CTP + +I + + + T++ L +V TW+
Sbjct: 2 TPNHIATLYPCMTKRLPTCTPVILPSISCTPVHPPPNAIVLTLTPLKKSQVYLTWI 57
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/82 (30%), Positives = 27/82 (32%)
Frame = +2
Query: 353 PPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 532
PP L A P L PP + PT TRP PPP T LP P
Sbjct: 909 PPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPP-----TSALPPPIP 963
Query: 533 TLGTPLTAVLYRPLARPRQSTT 598
P + P P TT
Sbjct: 964 ATQVPPPPLPPLPPPPPPVQTT 985
>SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = -1
Query: 320 LMWRQSTPTVVF-SVFLTALLMVTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVS 144
L+ RQ++P V+ +FLT L + TP VA + + P C +
Sbjct: 480 LIPRQTSPPVIIPIIFLTIALYLAITPIVAAPLESLFAYICFFAGIPIYCVLIRYKLQPK 539
Query: 143 --LADYVTTSIRLRTISALEVPSTWVMPYLVSAETESTD 33
+A +V +SI + + + VP ++ VS + S +
Sbjct: 540 WLIALFVLSSINIANLCTIPVPLCAILRQRVSTDFSSAE 578
>SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5)
Length = 191
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -2
Query: 685 CPRLEQQRKLRCEHHDPPRLAGRLRLQ--RYCCGLAWSC 575
CP LR H PP GR+R+ R+C G+A C
Sbjct: 33 CPLTAIVLGLRASVHLPPLRCGRVRVSTYRHCVGVACEC 71
>SB_3274| Best HMM Match : Pkinase (HMM E-Value=0.96)
Length = 148
Score = 28.7 bits (61), Expect = 4.7
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 443 PKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTITLQSETA 622
PKL +WTR P + + P++ P L T TA+L P+A ++ST LQ+ +
Sbjct: 8 PKLSTTEWTR-----PFAIVAQQHTPQDRP-LSTRYTAMLV-PIA--KKSTFKGLQASSN 58
Query: 623 SKAGRIM--VFTAEFPLLFQP 679
+ + RI+ + EFP P
Sbjct: 59 NSSWRIITYIMLCEFPPFRSP 79
>SB_49238| Best HMM Match : Metallothionein (HMM E-Value=2.8)
Length = 293
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/63 (34%), Positives = 25/63 (39%)
Frame = +2
Query: 344 WLLPPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPR 523
WL PP+ G S PVT L P A T AP K L PP +M+ L
Sbjct: 141 WLAPPNKGT--SAPVTWLAQPNKGTSAPVTWLAPPNKGTSAIITWLTPPNMMNSVTWLTP 198
Query: 524 NCP 532
P
Sbjct: 199 EDP 201
>SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026)
Length = 521
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 352 TTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDE-PDQKVAKEL 528
T G S ++ +PV S +S SSS +++ + + D +V D+ PDQ +
Sbjct: 67 TEEKGDSELEVVSPVPSDSSSSSSSSEDEKDDKDEPDHDPGNDPDNVSDKLPDQALKTIG 126
Query: 529 SDTGNSIDGSV 561
+ GN +GS+
Sbjct: 127 VEPGNKHEGSI 137
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Frame = +2
Query: 404 PPACR-PALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRP--L 574
PPA P PTT P T PP + TK P TP P
Sbjct: 69 PPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGT 128
Query: 575 ARPRQSTTITLQSET 619
P + TT T + T
Sbjct: 129 TTPTKPTTTTPPATT 143
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = +2
Query: 419 PALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLA--RPRQS 592
P PTT P PP + TK P TP T P A P +
Sbjct: 47 PTTPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKP 106
Query: 593 TTITLQSET 619
TT T + T
Sbjct: 107 TTTTPPATT 115
>SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26)
Length = 317
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 499 EPDQKVAKELSDTGNSIDGS-VV*TVGKTTPVHNNNVAVGDGQQGGADHGVHSGV 660
EPD+K KE D G ID S + + PV N VA Q + G H GV
Sbjct: 67 EPDKKPCKEAIDVGVIIDASESINNEQENFPVVLNFVANISKQYQVSQEGTHFGV 121
>SB_36942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -1
Query: 257 VTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTSIRLRTISALE---V 87
+T+TP + PN + + P +T CTP I Y + + T++ L+ V
Sbjct: 1 LTYTPMI---PNHITTIYPCITKRLPTCTPVTMPFISCTPVYQPPNATVLTLTPLKKSLV 57
Query: 86 PSTWV 72
TW+
Sbjct: 58 DLTWI 62
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/138 (18%), Positives = 50/138 (36%)
Frame = +1
Query: 112 SLIEVVT*SANETIVTNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVTMSNAVKNTEKT 291
+++ T TI S V T + T + +TVG ++TM + +T
Sbjct: 1958 TMVPGTTLEPGTTITPKSTEVPPTTMTPESTVTPETTMVPESTVGPEITMVSETTAGPET 2017
Query: 292 TVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDS 471
T+ + S G + + + T P + S+++ D+ A E
Sbjct: 2018 TLAQETTMASKSTVEPGTTLAPKSTVASVTTMAPESTVASVTTMAPDSTLA-PEITIASE 2076
Query: 472 TPIAASVVDEPDQKVAKE 525
+ +A+ P+ V E
Sbjct: 2077 STVASVTTMAPESTVPPE 2094
>SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 284 RRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPA--LPTTCAP 445
RR PS W+ S P+ R + LP P+G P LP P+ LP+ C P
Sbjct: 203 RRLPSGWLPSRRLPSRRLPSGRLPSRRLPSGRLPSG--RLPSRWLPSRRLPSGCLP 256
>SB_47665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 245 PT-VAETPNRVAELVPALTVEPTNCTPPLFV 156
PT V +TP + +VP LT E +CTPPL V
Sbjct: 47 PTRVRQTPMTSSSMVP-LTWEKHHCTPPLSV 76
>SB_46264| Best HMM Match : rve (HMM E-Value=1.9e-16)
Length = 979
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 24 QF*VRRFRFRAYQIRHYPC*RYLQSTDCSEPD*GCYIVCQRN 149
+F +R RF + I+H P + L + + P GC +VCQ N
Sbjct: 656 RFKMRLMRFH-FSIKHVPG-KSLHTANALSPRGGCVLVCQPN 695
>SB_28628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -1
Query: 257 VTFTPTVAETPNRVAELVPALTVEPTNCTPPLFVTIVSLADYVTTSIRLRTISALE---V 87
+T+TP TPN + L P +T CTP I + + + T++ L+ V
Sbjct: 20 LTYTPV---TPNHITTLYPCMTKRLPTCTPVTMPFISCTPLHPPPNATVLTLTPLKKSLV 76
Query: 86 PSTWV 72
TW+
Sbjct: 77 DLTWI 81
>SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14)
Length = 506
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -3
Query: 438 HVVGNAGRQAGGRPNRVTGLDPAG--PRWGGNNQALNRNA 325
H GNAG Q R V+ P G P +QA NRNA
Sbjct: 106 HQCGNAGTQTRTRTKTVSEACPGGRCPYHFSESQACNRNA 145
>SB_4451| Best HMM Match : Cornifin (HMM E-Value=0.11)
Length = 1384
Score = 27.9 bits (59), Expect = 8.1
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Frame = -1
Query: 305 STPTVVFSVFLTALLMVTFTPTVAETPNRVAELVPALTVEPT-----------NCTPPLF 159
STP+ + L + T +PTV + P TV PT TP L
Sbjct: 361 STPSPTVEIALNTTVAATPSPTVEIALDNTVAATPNFTVTPTLNYTVAATPNFTVTPTLN 420
Query: 158 VTIVSLADYVTTSIRLRTISALEVPSTWVMP---YLVSAETEST 36
T+ + +++ T T++A P+ V P Y V+A + T
Sbjct: 421 YTVAATSNFTVTPTLKYTVAA--TPNFTVTPTLNYTVAATSNFT 462
>SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 288
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 464 WTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQS 592
WT PQ PP+ ++ + P P P+ + R RQS
Sbjct: 65 WTAPQQDPPVDSARARSPPWTAPEPNPPVDSARARSFRGQRQS 107
>SB_51035| Best HMM Match : Extensin_2 (HMM E-Value=0.33)
Length = 321
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Frame = +2
Query: 356 PHLGPAGSKPVTLLGLPPACRPA------LPTTCAPK---LKPIKWTRPQLPPPLLMSQT 508
P G PV G+P C P+ P++C P + P + + +P P Q
Sbjct: 156 PSFGSVYGAPVQFSGMPSQCAPSCMAASPCPSSCQPTCCGMNPSQLAQSVVPAP----QY 211
Query: 509 KKLPRNCPTLGTPLTAVLYRPLARPR 586
+P PT P T +P A P+
Sbjct: 212 VHVPPATPTPKPPPTPKTPKPGAAPK 237
>SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 467 TRPQLPPPLLMSQTKKL---PRNCPTLGTPLTAVLYRPLAR 580
T+ PPL + KL PR CPT G PL VL RP R
Sbjct: 15 TKAGTGPPLEVDGIDKLDAMPRKCPTPGDPL--VLERPPPR 53
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/56 (25%), Positives = 19/56 (33%)
Frame = +2
Query: 383 PVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPL 550
P + PAC P P +C P R P + + P C T P+
Sbjct: 661 PAAMTCPQPACAPQSPMSCMPSCPAYCCKRNHFPRKAMAKKGNTCPAICDTQCAPV 716
>SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 503 QTKKLPRNCPTLGTPLTAVLYRPLARPRQS-TTITLQSET-ASKAGRIMV 646
Q LPRN P L + T V R +RP TT++ S T S+AG I V
Sbjct: 67 QRTSLPRNRPLLPSRETPVQKRNPSRPISGRTTVSALSRTPGSRAGGITV 116
>SB_25685| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +3
Query: 42 FRFRAYQIRHYPC*RYLQSTD--CSEPD*GCYIVC-QRNDCDEQWRRTIRRL 188
F++++YQ YL ++D CS PD C C Q NDC + R+TI+++
Sbjct: 12 FQYKSYQ--QCTGVSYLCNSDDECSSPDERC---CPQENDCPLKCRKTIKKI 58
>SB_3220| Best HMM Match : Ion_trans (HMM E-Value=5.6e-22)
Length = 256
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 79 VEGTSRALIVLSLIEVVT*SANETIVTNSGGVQFVGSTVRAGTNSATRLGVSATVGVKVT 258
++ S ++ VL ++ VV + +S G+Q +G+T+RA N L +GV +
Sbjct: 62 LDSGSSSISVLRVVRVVRVFRVFKLSRHSRGLQILGNTLRASMNELMMLMFFLFIGVMIF 121
Query: 259 MS 264
S
Sbjct: 122 AS 123
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.131 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,303,386
Number of Sequences: 59808
Number of extensions: 639970
Number of successful extensions: 2585
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2444
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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