Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12h01f
(553 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 47 1e-05
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 38 0.007
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 34 0.067
SB_27302| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.089
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 34 0.089
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 32 0.36
SB_31929| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 30 1.1
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31) 30 1.1
SB_9280| Best HMM Match : 7tm_1 (HMM E-Value=0.0027) 30 1.1
SB_2462| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_13183| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_41404| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_37510| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_20059| Best HMM Match : Pkinase_Tyr (HMM E-Value=0.027) 29 2.5
SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0) 29 2.5
SB_44696| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_54278| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5) 29 3.3
SB_13278| Best HMM Match : zf-CHC2 (HMM E-Value=6.8) 29 3.3
SB_2622| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26) 28 4.4
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 28 4.4
SB_15580| Best HMM Match : Pentapeptide (HMM E-Value=0.2) 28 4.4
SB_4148| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2) 28 4.4
SB_51758| Best HMM Match : MNNL (HMM E-Value=1.2) 28 5.8
SB_30809| Best HMM Match : Mab-21 (HMM E-Value=0) 28 5.8
SB_26399| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_4676| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_51992| Best HMM Match : C2 (HMM E-Value=0.00041) 28 5.8
SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 28 5.8
SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_30926| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_22325| Best HMM Match : Nucleoplasmin (HMM E-Value=5.8) 27 7.7
SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 7.7
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 27 7.7
SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37) 27 7.7
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 55.2 bits (127), Expect = 3e-08
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +2
Query: 218 YWLFTRRNQNNHQV-ITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLA 394
+ LFTR + H V I + +V ++ S Y+G FVI HG+ +G+++ +R ALL
Sbjct: 72 FQLFTRSHP--HLVSIDDSDVKKLKASTYDGKKRTFVIAHGYTESGSTSWVGHMRQALLQ 129
Query: 395 VSDCNVIVVDWRGLANGLYNTAVNGVPSVG 484
D NV++ DW A+G+Y A VG
Sbjct: 130 KDDVNVVITDWGPGADGMYWQATANTRLVG 159
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +2
Query: 287 RNSN-YNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANG--LYNT 457
RNS + G+ L +I+HG+ +GN + ++R LL NVI VDW+ A+G LY+
Sbjct: 14 RNSTAFRGDRKLVLIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHV 73
Query: 458 AVNGVPSVGQFLGNFLVWLINNGGGNWGRVHL 553
A VG L + + + RVHL
Sbjct: 74 AAGNTRVVGAQLAELITTIQRVFDFDLRRVHL 105
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 37.5 bits (83), Expect = 0.007
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Frame = +2
Query: 224 LFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMI--------- 376
L+T+ + + ++V+++ + +I S++ + IVHG+ G +V+++I
Sbjct: 57 LYTQASPDKYEVLSDADTATIEKSSFLPHRTTRFIVHGYA--GLDSVDSIIDLKGWWGIR 114
Query: 377 -RPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWG 541
+ LL SD NVI+VDW A Y AV VG + F+ +++ G G
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREG 170
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 34.3 bits (75), Expect = 0.067
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 367
+ N NN + N NN+ N N+N+I N+N N N + + N+N N+ N
Sbjct: 79 NNNNNNNHHHHHNNINNNNNNNNNNNNINNINNNNNNNNNNINNNNNNNNNNNNNNNN 136
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+ N NN + N NN+ + N N N+ N+N N N
Sbjct: 99 NNNNNNNINNINNNNNNNNNNINNNNNNNNNNNNNNNNN 137
>SB_27302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 33.9 bits (74), Expect = 0.089
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 191 MSRNGANNQYWLFTRRNQNNHQVI---TNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSA 361
+S N NN + R N NN+ I N N NSI N N N N I + N+N NS
Sbjct: 23 ISNNNNNNNNSINNRNNNNNNNSINNRNNTNNNSINNRNNNNNNN--SINNRNNTNNNSI 80
Query: 362 VNTMIRPALLAVSDCN 409
N ++++CN
Sbjct: 81 NNRNNNNNNNSINNCN 96
Score = 33.1 bits (72), Expect = 0.16
Identities = 23/58 (39%), Positives = 28/58 (48%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 367
+RN NN + R N NN+ I N N NSI N N N I + N+N NS N
Sbjct: 71 NRNNTNNNS-INNRNNNNNNNSINNCNNNSINNRNNNS------INNRSNTNNNSINN 121
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 200 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNS-NYNGNLPLFVIVHGWNSNGNSAVN 367
N NN+ + N NN+ I N N N+ NS N N I + N+N N+++N
Sbjct: 16 NSINNRS--ISNNNNNNNNSINNRNNNNNNNSINNRNNTNNNSINNRNNNNNNNSIN 70
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 33.9 bits (74), Expect = 0.089
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Frame = +2
Query: 209 NNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWN-----SNGNSAVNTM 373
+ Q+ L+TR + +Q + +++ R++++N + +I+HG+ ++ VN
Sbjct: 72 HTQFMLYTRESPVQYQQLYE-DMDITRDTHFNASRRTVIIIHGFAGFTTLTSIRHEVNWW 130
Query: 374 ---IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGR 544
++ LL D NVI+VDW A + AV VG L L G
Sbjct: 131 GFPMKNELLWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAY 190
Query: 545 VHL 553
VH+
Sbjct: 191 VHV 193
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 197 RNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGW 340
R G N + LFTR N VI + +V+ ++ S Y+G +IVHG+
Sbjct: 483 RVGTN--FRLFTRSNPLISNVIDDSDVSKLQASRYDGKKRTIIIVHGF 528
Score = 31.1 bits (67), Expect = 0.63
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +2
Query: 374 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGN 535
IR AL+ D NVI DW A Y A VG + L+ +NN GN
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITE-LIKFLNNQTGN 684
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 367
S N NN + R N NN+ + N + + NS+ N N + + +N NS++N
Sbjct: 1755 SINNRNNNNSINNRNNTNNNSINNNNSSINNNNSSINNNNSSIINNNSSINNNNSSIN 1812
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 239 NQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 367
N NN +I N + + NS+ N N + + N+N NS++N
Sbjct: 1791 NNNNSSIINNNSSINNNNSSINNNNSSIINNNSSNNNNNSSIN 1833
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 239 NQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 367
N NN +I N + N+ NS+ N N + + N NS++N
Sbjct: 1812 NNNNSSIINNNSSNNNNNSSINNNNSSIINNNSSIINNNSSIN 1854
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNS--NGNSAVN 367
S N NN + R N N+ N N NSI N+N + N I + +S N NS++N
Sbjct: 1746 SINNCNNNNSINNRNNNNSINNRNNTNNNSINNNNSSINNNNSSINNNNSSIINNNSSIN 1805
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+RN NN + R N NN+ + N N I +S+ N +
Sbjct: 1855 NRNNTNNNS-INNRSNTNNNSINNRSNTNRINSSSNNND 1892
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 203 GANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 367
G+NN Y + +N + GN+NS +++ Y GN ++ G+ N N +N
Sbjct: 1373 GSNNAYSNNGYQGYSNANINNQGNINSYQSNGYQGNNNMY----GYGGNNNVYMN 1423
>SB_31929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 31.1 bits (67), Expect = 0.63
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTM 373
S N NN N NN+ N N N+ N+N N N + N+N N+ N +
Sbjct: 2 SNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-----NNNNNNNNNKNNRL 56
Query: 374 IRP 382
+RP
Sbjct: 57 LRP 59
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 114 DTFGCLMARVFLTSLTWKNRPRKTSLCQGTVQTTNTGFSPDVTKTTIKL 260
+T G L VF+ L +P K S Q T QTT T S + ++ + +
Sbjct: 641 ETGGVLANSVFVIRLGNSKQPHKASHSQTTAQTTQTSSSSEASQNSFSI 689
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 200 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNT 370
N ++N + +N+ + +N N NS NSN N N + NSN NS +N+
Sbjct: 126 NSSSNSNSNSNNNSNSNNNINSNSNSNSNSNSNSNSN-------NNINSNSNSNINS 175
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQN---NHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAV 364
S N +N+ + + N N N +N N+NS NSN N N NSN NS
Sbjct: 135 SNNNSNSNNNINSNSNSNSNSNSNSNSNNNINSNSNSNINSNS---------NSNSNSNS 185
Query: 365 NTMIRPALLAVSDCNVIV 418
N+ + + A + V
Sbjct: 186 NSTVTATVTATATATATV 203
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 236 RNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMI 376
+ Q+N+ +N N+NS RNSN + N NSN NS N I
Sbjct: 106 QQQHNNNSNSNNNINSNRNSNSSSN-------SNSNSNNNSNSNNNI 145
>SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31)
Length = 273
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTM 373
S N NN N NN+ I N N N N+N N N + N+N N+ NT
Sbjct: 213 SNNNNNNNNNNNNNNNNNNNNNINNNNNNINNNNNINNNNNIN------NNNNNNNNNTQ 266
Query: 374 I 376
I
Sbjct: 267 I 267
>SB_9280| Best HMM Match : 7tm_1 (HMM E-Value=0.0027)
Length = 292
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 197 RNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
++ NN ++ + N NNH +N N N RN+N N N
Sbjct: 213 KSNDNNNHYRNSNDNNNNHFRKSNDNNNHYRNNNSNIN 250
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +2
Query: 197 RNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNS 358
RN +N + NNH +N N N R SN N N H NSN N+
Sbjct: 182 RNSNDNNNHFRKSNDNNNHYRNSNDNNNHFRKSNDNNN-------HYRNSNDNN 228
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 200 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
N NN Y + NNH +N N N RNSN N N
Sbjct: 195 NDNNNHYR--NSNDNNNHFRKSNDNNNHYRNSNDNNN 229
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +2
Query: 182 DILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNS 358
+I S N +N+ + NNH +N N N R SN N N H NSN N+
Sbjct: 157 NISSSSNRSNDNNNHIHNSSDNNHYRNSNDNNNHFRKSNDNNN-------HYRNSNDNN 208
>SB_2462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 176 EEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
E D R N YW+ N N++ N N +S +SN N N
Sbjct: 53 EVDSKPYRRDLYNWYWIIGNNNNNSNNNNNNNNSSSSSSSNNNSN 97
>SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1249
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
S N NN N NN+ TN N NS N+N N
Sbjct: 26 SNNNNNNNNNNNNNNNNNNNNTTTNNNSNSSNNNNTTTN 64
>SB_13183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 54 LAMLSP*SLETTVTMWKV*ADTFGCLMARVFLTSLTWKNRPRKTSLC 194
L+++ S + T+ ++ FGC A ++ + W +P + SLC
Sbjct: 87 LSLVGVASFQAPTTLTRLVLLAFGCGAAMLWFCGIVWSKKPSERSLC 133
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+ N NN+ NN+ TN N N+I N+N N N
Sbjct: 229 NNNNNNNKNNNNNNTTTNNNNTTTNNNNNNINNNNNNNN 267
>SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+ N NN N NN+ N N N+I+N+N N N
Sbjct: 42 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKNNNNNNN 80
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+ N NN + N NN+ N N N+ N+N N N
Sbjct: 26 NNNNNNNNKNNYNNNNNNNNNNNNNNNNNNNNNNNNNNN 64
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+ N NN N NN+ I N N N+ N+N N N
Sbjct: 50 NNNNNNNNNNNNNNNNNNNNNNIKNNNNNNNNNNNKNNN 88
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 367
+ N NN+ N NN+ N N N+ N+N N N + N+N N+ N
Sbjct: 27 NNNNNNNKNNYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKNNNNNNNNNNN 84
>SB_41404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = -1
Query: 403 VGDGQQGGADHGVHSGVSVAVPAVDNNKE-----RQVSIVVRVPDRVDIAICNNLMVVLV 239
+G+G G G++ GV+VAV + ++ ++ I+ +P +IA M+V V
Sbjct: 153 IGEGTFGKCFSGIYKGVTVAVKTFKDQQDYKAVHKECEILTEIPSHPNIA-----MLVGV 207
Query: 238 TSGEKPVLV---VCTV 200
++ E P L+ +CT+
Sbjct: 208 STDEIPFLLLTKLCTI 223
>SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +2
Query: 131 DGEGVPHLVDLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+ + H + P + + R G + F N NN+ N N N+ N+N N N
Sbjct: 52 EARSIDHFAKSDAPGTQHV--DRKGTFIDSFNFCNNNNNNNNNNNNNNNNNNNNNNNNNN 109
>SB_37510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNY 301
+ N +NN Y + + N +N+ N N N+ RN+NY
Sbjct: 70 NNNHSNNNYTIDNKDNSSNNNYTIN-NKNNSRNNNY 104
>SB_20059| Best HMM Match : Pkinase_Tyr (HMM E-Value=0.027)
Length = 242
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = -1
Query: 403 VGDGQQGGADHGVHSGVSVAVPAVDNNKE-----RQVSIVVRVPDRVDIAICNNLMVVLV 239
+G+G G G++ GV+VAV + ++ ++ I+ +P +IA M+V V
Sbjct: 153 IGEGTFGKCFSGIYKGVTVAVKTFKDQQDYKAVHKECEILTEIPSHPNIA-----MLVGV 207
Query: 238 TSGEKPVLV---VCTV 200
++ E P L+ +CT+
Sbjct: 208 STDEIPFLLLTKLCTI 223
>SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 689
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/73 (31%), Positives = 29/73 (39%)
Frame = +2
Query: 200 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIR 379
N NN + NN+ +N N NS NSN N N NSN NS N+
Sbjct: 371 NSNNNSNSNSNNNSNNNNNNNSNSNSNSNSNSNSNSNS---------NSNSNSNSNSNSN 421
Query: 380 PALLAVSDCNVIV 418
+ A + V V
Sbjct: 422 STVTATTTTTVTV 434
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/57 (36%), Positives = 24/57 (42%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAV 364
S + +NN N NN +N N NS NSN N N NSN NS V
Sbjct: 376 SNSNSNNNS---NNNNNNNSNSNSNSNSNSNSNSNSNSNSN-----SNSNSNSNSTV 424
Score = 27.9 bits (59), Expect = 5.8
Identities = 24/70 (34%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +2
Query: 200 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN-TMI 376
N NN + NN+ +N N NS NSN N N NSN NS V T
Sbjct: 575 NSNNNSNSNSNNNSNNNNNNNSNSNSNSNSNSNSNNNS---------NSNSNSTVTATTT 625
Query: 377 RPALLAVSDC 406
A V C
Sbjct: 626 TTATATVQWC 635
>SB_44696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +2
Query: 134 GEGVPHLVDLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
GE + ++ E L + N NN N NN+ N N NSI N+N N N
Sbjct: 192 GERIAKKSRIDVNVSEMALENNNNNNNN-------NNNNNNNNNNSNSNSINNNNNNNN 243
>SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Frame = +2
Query: 137 EGVPHLVDLEEPAEEDILMSRNGAN--------NQYWLFTRRNQNNHQVITNGNVNSIRN 292
E +P L ++ E A +D+ N NQ + N NN+ N N N+ N
Sbjct: 125 ELIPFLEEMHEVAVDDVCAHLRSTNMNPYRKFENQIIIINNNNNNNNNNNNNNNNNNNNN 184
Query: 293 SNYNGN 310
+N N +
Sbjct: 185 NNNNND 190
>SB_54278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 182 DILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
D+L N NN N NN+ N N N+ N+N N N
Sbjct: 15 DLLKLSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 57
>SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5)
Length = 191
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 328 CPRLEQQRKLRCEHHDPPRLAGRLRLQ--RYCCGLAWSC 438
CP LR H PP GR+R+ R+C G+A C
Sbjct: 33 CPLTAIVLGLRASVHLPPLRCGRVRVSTYRHCVGVACEC 71
>SB_13278| Best HMM Match : zf-CHC2 (HMM E-Value=6.8)
Length = 152
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+ N NN N NN+ N N NS NSN N N
Sbjct: 106 NNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNSNNNNN 144
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 158 DLEEPAEEDIL-MSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
DL++ AE IL + R+ NN N NN+ N N N+ N+N N N
Sbjct: 60 DLQQ-AEPCILPLKRHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 110
>SB_2622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVH 334
+ N NN N+NN+ N N NS +++ N N F +VH
Sbjct: 91 NNNNNNNNNNNNNNNNKNNNNNNNNNNNNSDNDNDNNNNHHFFDVVH 137
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -1
Query: 385 GGADHGVHS--GVSVAVPAVDNNKERQVSIVVRVPDRVDIAICNNLMVVLVTSGEKPVL 215
G D ++S G+ A+D S+ +RV D + + +L V +V + PVL
Sbjct: 1938 GSGDFSMNSATGLITLATALDYESRSAYSLTIRVTDTKEGVVTASLFVTVVDQNDTPVL 1996
>SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26)
Length = 317
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 514 EPDQKVAKELSDTGNSIDGS-VV*TVGKTTPVHNNNVAVGDGQQGGADHGVHSGV 353
EPD+K KE D G ID S + + PV N VA Q + G H GV
Sbjct: 67 EPDKKPCKEAIDVGVIIDASESINNEQENFPVVLNFVANISKQYQVSQEGTHFGV 121
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTM 373
+ N NN N NN+ N N N+ N+N N N + N+N N+ N+
Sbjct: 99 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEFNST 158
Query: 374 IR 379
R
Sbjct: 159 FR 160
>SB_15580| Best HMM Match : Pentapeptide (HMM E-Value=0.2)
Length = 610
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 200 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSA 361
N ANN N NN N N N+ +N N N + N+N N+A
Sbjct: 243 NNANNANNANNANNANNANNANNANANNANANNANANNANANNANANNANANNA 296
>SB_4148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYN 304
+ N +NN R N+NN+ N N NS NSN N
Sbjct: 67 NNNNSNNNSNNNNRSNRNNNSNNNNRNNNSNNNSNNN 103
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
S N +NN N NN+ N N NS N+ N N
Sbjct: 71 SNNNSNNNNRSNRNNNSNNNNRNNNSNNNSNNNNRSNNN 109
>SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2)
Length = 244
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 173 AEEDILMSRNGANNQYW--LFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
A + L+ N A N+ + + T N NN+ N N N+ N+N N N
Sbjct: 149 APKGTLLCWNSAINEKYAKIMTDNNNNNNNNNNNNNNNNNNNNNNNNN 196
>SB_51758| Best HMM Match : MNNL (HMM E-Value=1.2)
Length = 326
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 158 DLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
D ++ ++D + N NN N NN+ N N N+ N+N N N
Sbjct: 144 DDDDDDDDDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 194
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 158 DLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
D ++ ++D + N NN N NN+ N N N+ N+N N N
Sbjct: 143 DDDDDDDDDDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 193
>SB_30809| Best HMM Match : Mab-21 (HMM E-Value=0)
Length = 1710
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 191 MSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+S N NN N NN+ N N N+ N+N N N
Sbjct: 363 LSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 402
>SB_26399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+ N NN N NN+ TN N N+ N+N N N
Sbjct: 115 NNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNN 153
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTM 373
+ N NN N NN+ N N N+ N+N N N + N+N N+ N +
Sbjct: 145 NNNNNNNNNNNNNNDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNV 204
Query: 374 IRPALLAV 397
R LL V
Sbjct: 205 NRGWLLQV 212
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = +2
Query: 155 VDLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
VD E + + N NN N NN+ N N N+ N+N N N
Sbjct: 33 VDFNEHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 84
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+ N NN T N NN+ N N N+ N N N N
Sbjct: 126 NNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNDNNNNN 164
>SB_4676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 257 VITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNT 370
+I+N N NS NSN N N + NSN N+ T
Sbjct: 8 LISNSNSNSNSNSNTNTNTNSNSNTNSKNSNSNTTTTT 45
>SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
+ N NN + N NNH N N N+ ++N N N
Sbjct: 177 NNNDQNNNHNNNNNNNSNNHNNHKNNNHNNNNSNNNNSN 215
>SB_51992| Best HMM Match : C2 (HMM E-Value=0.00041)
Length = 391
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 200 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 310
N +NN N NN+ N N NS N+N N N
Sbjct: 289 NNSNNNNNNNNNNNNNNNNNNNNNNRNSNNNNNNNNN 325
>SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 288
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 549 WTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQS 421
WT PQ PP+ ++ + P P P+ + R RQS
Sbjct: 65 WTAPQQDPPVDSARARSPPWTAPEPNPPVDSARARSFRGQRQS 107
>SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -2
Query: 546 TRPQLPPPLLMSQTKKL---PRNCPTLGTPLTAVLYRPLAR 433
T+ PPL + KL PR CPT G PL VL RP R
Sbjct: 15 TKAGTGPPLEVDGIDKLDAMPRKCPTPGDPL--VLERPPPR 53
>SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 510 QTKKLPRNCPTLGTPLTAVLYRPLARPRQS-TTITLQSET-ASKAGRIMV 367
Q LPRN P L + T V R +RP TT++ S T S+AG I V
Sbjct: 67 QRTSLPRNRPLLPSRETPVQKRNPSRPISGRTTVSALSRTPGSRAGGITV 116
>SB_30926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 546 TRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLAR 433
+R +LPPPL Q TL T +TA + P+ R
Sbjct: 194 SRSRLPPPLTNPQVSGTKHAKATLTTKITASTWLPILR 231
>SB_22325| Best HMM Match : Nucleoplasmin (HMM E-Value=5.8)
Length = 282
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 188 LMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYN 304
+ +++ NN N NN+ N N+N+ N+NYN
Sbjct: 123 ICTKHNNNNNNNNNNNNNNNNNINNNNNNINNNNNNNYN 161
>SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 230 TRRNQNNHQVITNGNV--NSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLA 394
+ N NN+ TN N N+ N++ N + + ++ N N + ++ LL+
Sbjct: 993 SEHNDNNNNTNTNNNSDNNNTNNNSDNNTINNYSVIDDNKENNNKIIQQQLKTKLLS 1049
>SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1346
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = -1
Query: 385 GGADHGVHSGVSVAVPAVDNNKERQVSIVVRVPDRVDIAICNNLMVVLVTSGEKPVL 215
GG +G++ +VP+ N+ + +++ +P +A N+L LVTSG KP+L
Sbjct: 626 GGYPVASLAGIAHSVPS-HINQNQPITVQCTLPTFTQLA--NHLRQPLVTSGVKPLL 679
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 236 RNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVI 415
RN NN N N N+ N+N N N + N+N + L +SD ++
Sbjct: 680 RNSNNSNNNNNNNNNNNNNNNNNNN-------NNNNNNKYGKFTEIFVDELEDLSDLKIL 732
Query: 416 VVDW 427
VVD+
Sbjct: 733 VVDY 736
>SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 185 ILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRN 292
I+ + N +N T N NN+ +I N N NS N
Sbjct: 16 IINNNNNNHNNGHNITNNNNNNNIIINNNNDNSKNN 51
>SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37)
Length = 1481
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 188 LMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYN 304
L S N NN Y + T N N + NVNS +NSN N
Sbjct: 297 LNSYNNNNNTYNINTYNNNNTY------NVNSYKNSNKN 329
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,623,334
Number of Sequences: 59808
Number of extensions: 461112
Number of successful extensions: 2969
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2155
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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