Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12h01f
(553 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 29 0.031
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 28 0.072
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.39
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 0.89
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 1.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 1.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.1
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 2.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.8
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 4.8
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 6.3
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 6.3
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 6.3
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 6.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 6.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 8.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 8.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 8.3
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 21 8.3
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 29.1 bits (62), Expect = 0.031
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +2
Query: 167 EPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNS 346
+P +E+ + GA L T + +N+ IT GN N+ ++N N N +G N
Sbjct: 200 QPEDEECTEATAGA---VVLETCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNNGAND 256
Query: 347 NGN 355
NGN
Sbjct: 257 NGN 259
Score = 27.9 bits (59), Expect = 0.072
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNL 313
S N NN N NN+ NGN N N+N NG++
Sbjct: 238 SNNNNNNN-----NNNNNNNGANDNGNGNGASNNNNNGDM 272
Score = 24.2 bits (50), Expect = 0.89
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 230 TRRNQNNHQVITNGNVNSIRNSNYNGN 310
T + NN+ N N N+ N N NGN
Sbjct: 235 TNASNNNNNNNNNNNNNNGANDNGNGN 261
Score = 21.8 bits (44), Expect = 4.8
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 200 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLF 322
N +NN N NN+ N N N SN N N +F
Sbjct: 236 NASNNNN---NNNNNNNNNNGANDNGNGNGASNNNNNGDMF 273
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.9 bits (59), Expect = 0.072
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 483 PTLGTPLTAVLYRPLARPRQST 418
P +GTP T ++Y+P P Q++
Sbjct: 847 PVIGTPSTGMMYKPFLIPEQTS 868
Score = 21.0 bits (42), Expect = 8.3
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +3
Query: 153 SLTWKNRPRKTSLCQGTVQTTNTGFSPDVTKTTIKLLQMAMSTLSGT 293
S +W+ K S + +T+ G P TT+ + + ST+ T
Sbjct: 704 SHSWEGDSFKVSKHEEVSRTSTAGQFPTNVATTVTSMSIDQSTVIQT 750
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.39
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 230 TRRNQNNHQVITNGNVNSIRNSNYNGN 310
T N NN++ N N N+ N+NYN N
Sbjct: 322 TIHNNNNYKY--NYNNNNYNNNNYNNN 346
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.2 bits (50), Expect = 0.89
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 230 TRRNQNNHQVIT-NGNVNSIRNSNYNGNLPLF 322
T N NN+ N N N+ N+NYN L+
Sbjct: 322 TIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLY 353
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = +2
Query: 194 SRNGANNQYWLFTRRNQNNHQVITNGNVN 280
+ N NN Y + N NN++ + +N
Sbjct: 330 NNNNYNNNYNNYNNNNYNNYKKLYYNIIN 358
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 245 NNHQVITNGNVNSIRNSNYNGN 310
NN++ N N+ N+NYN N
Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNN 108
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 239 NQNNHQVITNGNVNSIRNSNYNGN 310
N NN+ N N N+ N+NYN N
Sbjct: 93 NYNNY----NNNYNNNYNNNYNNN 112
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 245 NNHQVITNGNVNSIRNSNYNGN 310
NN++ N N+ N+NYN N
Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNN 108
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 239 NQNNHQVITNGNVNSIRNSNYNGN 310
N NN+ N N N+ N+NYN N
Sbjct: 93 NYNNY----NNNYNNNYNNNYNNN 112
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 433 TTPVHNNNVAVGDGQQGGAD 374
+ P +N + GDG++GGA+
Sbjct: 1052 SNPSYNFSSVSGDGEEGGAE 1071
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 433 TTPVHNNNVAVGDGQQGGAD 374
+ P +N + GDG++GGA+
Sbjct: 1048 SNPSYNFSSVSGDGEEGGAE 1067
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 245 NNHQVITNGNVNSIRNSNYN 304
NN++ N N+ N+NYN
Sbjct: 320 NNYKYSNYNNYNNYNNNNYN 339
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 22.6 bits (46), Expect = 2.7
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 239 NQN-NHQVITNGNVNSIRNSNYNGN 310
NQN N+Q N N+ +N+N N N
Sbjct: 428 NQNDNNQKNNKKNANNQKNNNQNDN 452
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 4.8
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = +3
Query: 114 DTFGCLMARVFLTSLTWKNRPRKTSLCQGTVQTTNTGFSPD 236
D C++ + + K+ P + C V TT +PD
Sbjct: 1440 DETSCMLDKTRAQTFDGKDYPLRLGPCWHAVMTTYPRINPD 1480
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 4.8
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 31 GWLNSIVFWQCYP 69
GW + +F+Q YP
Sbjct: 23 GWWKNAIFYQVYP 35
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 272 NVNSIRNSNYNGN 310
N N+ N+NYN N
Sbjct: 93 NYNNYNNNNYNNN 105
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 272 NVNSIRNSNYNGN 310
N N+ N+NYN N
Sbjct: 93 NYNNYNNNNYNNN 105
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 272 NVNSIRNSNYNGN 310
N N+ N+NYN N
Sbjct: 93 NYNNYNNNNYNNN 105
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 272 NVNSIRNSNYNGN 310
N N+ N+NYN N
Sbjct: 93 NYNNYNNNNYNNN 105
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 6.3
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 230 TRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNS 358
T R ++ I + N+ + SNYN + + +N+N N+
Sbjct: 304 TERERSKEPKIISSLSNNYKYSNYNNYNNNYNNYNNYNNNYNN 346
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 239 NQNNHQVITNGNVNSIRNSNYNGN 310
NQNN+Q + +S N+ +N N
Sbjct: 440 NQNNNQHNDQAHHSSKSNNRHNNN 463
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 120 FGCLMARVFLTSLT 161
FGCL R+F LT
Sbjct: 275 FGCLSTRLFYYQLT 288
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.0 bits (42), Expect = 8.3
Identities = 11/60 (18%), Positives = 26/60 (43%)
Frame = +2
Query: 161 LEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGW 340
L+EP+ +S++ + L+TR + V+ + +SN + P ++ +
Sbjct: 235 LDEPSANRTDLSKDDYESLVHLYTRDQSETYDVLRSWRNLMDEHSNRTNSDPRMILTEAY 294
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 8.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 337 LEQQRKLRCEHHD 375
L + R +RC HHD
Sbjct: 142 LTKSRLMRCLHHD 154
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 117 TFGCLMARVFLTSLTWKNRPRKTSL 191
T +M + F S W N R TSL
Sbjct: 15 TITIVMCQTFTYSHGWTNGKRSTSL 39
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,836
Number of Sequences: 438
Number of extensions: 4707
Number of successful extensions: 44
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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