Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12g24f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57807| Best HMM Match : SNF (HMM E-Value=5.9e-10) 96 2e-20
SB_58853| Best HMM Match : SNF (HMM E-Value=0) 89 2e-18
SB_21549| Best HMM Match : SNF (HMM E-Value=2.3e-18) 83 1e-16
SB_16714| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 5e-16
SB_22967| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_21548| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_6762| Best HMM Match : SNF (HMM E-Value=0) 63 1e-10
SB_26602| Best HMM Match : SNF (HMM E-Value=0) 60 1e-09
SB_32171| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_15959| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_26603| Best HMM Match : SNF (HMM E-Value=0) 50 2e-06
SB_39042| Best HMM Match : SNF (HMM E-Value=2.7e-17) 34 0.004
SB_16793| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_22164| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_13179| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_49479| Best HMM Match : R3H (HMM E-Value=0.0079) 33 0.19
SB_6709| Best HMM Match : PCNA_C (HMM E-Value=9.8) 32 0.25
SB_3285| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 32 0.33
SB_48636| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 31 0.44
SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_16713| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_37947| Best HMM Match : SAP (HMM E-Value=8e-07) 31 0.76
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_25705| Best HMM Match : PH (HMM E-Value=2e-17) 29 1.8
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_43151| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 29 2.3
SB_8905| Best HMM Match : FYVE (HMM E-Value=0.13) 29 2.3
SB_58388| Best HMM Match : Lipocalin (HMM E-Value=7.4) 29 3.1
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 29 3.1
SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3) 29 3.1
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 3.1
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_13985| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_6248| Best HMM Match : KH_1 (HMM E-Value=1.6e-41) 28 4.1
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 28 4.1
SB_50198| Best HMM Match : Frizzled (HMM E-Value=0) 28 5.4
SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33) 28 5.4
SB_9234| Best HMM Match : Topoisom_I_N (HMM E-Value=0) 28 5.4
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_41898| Best HMM Match : EGF_CA (HMM E-Value=3.9e-14) 28 5.4
SB_29525| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 27 7.1
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 27 7.1
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 27 9.4
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_20795| Best HMM Match : Amelogenin (HMM E-Value=1) 27 9.4
SB_50208| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_36894| Best HMM Match : PXA (HMM E-Value=2.5e-13) 27 9.4
SB_34623| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_20227| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_57807| Best HMM Match : SNF (HMM E-Value=5.9e-10)
Length = 260
Score = 95.9 bits (228), Expect = 2e-20
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +3
Query: 312 EDIEGAPERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAFLIPYIIVLFLVGK 491
E + ER WSN+I+FL+SCI +VGLGNVWRFP++ Y+NGG +FLIPY++ L G
Sbjct: 58 EQVVVIEEREQWSNKIDFLLSCIGYAVGLGNVWRFPYLCYKNGGASFLIPYLVCLVFCGI 117
Query: 492 PMYYLECVLG 521
P++YLE LG
Sbjct: 118 PIFYLEVALG 127
>SB_58853| Best HMM Match : SNF (HMM E-Value=0)
Length = 905
Score = 89.0 bits (211), Expect = 2e-18
Identities = 44/110 (40%), Positives = 66/110 (60%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKKAFEDIEGAPERMMWSNQIEFLM 371
P T + ++ P +P K + + V V + K IE +R W N++EF++
Sbjct: 56 PETTENVTIIIPETPDSKDPEENIVTKQEAVVSVKQVK----IEETGDRPKWGNKVEFML 111
Query: 372 SCIATSVGLGNVWRFPFVAYQNGGGAFLIPYIIVLFLVGKPMYYLECVLG 521
+ I +VGLGNVWRFP++ +NGGGAFLIPY I L L+G P+++LE +G
Sbjct: 112 ATIGFAVGLGNVWRFPYLCQKNGGGAFLIPYTISLALIGIPLFFLELGIG 161
>SB_21549| Best HMM Match : SNF (HMM E-Value=2.3e-18)
Length = 515
Score = 83.4 bits (197), Expect = 1e-16
Identities = 33/69 (47%), Positives = 48/69 (69%)
Frame = +3
Query: 315 DIEGAPERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAFLIPYIIVLFLVGKP 494
D+E R WS++ EF++S + VG GNVWRFP++ Y+NGG FLIPY I+L + G P
Sbjct: 277 DVEEEQTRDKWSSKAEFMLSSLGYCVGFGNVWRFPYLCYKNGGATFLIPYFIMLIVNGIP 336
Query: 495 MYYLECVLG 521
+++LE +G
Sbjct: 337 LFFLELAIG 345
>SB_16714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 961
Score = 81.0 bits (191), Expect = 5e-16
Identities = 32/65 (49%), Positives = 49/65 (75%)
Frame = +3
Query: 327 APERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAFLIPYIIVLFLVGKPMYYL 506
A +R W+N+ EFL++ + ++GLGNVWRFP + ++NGG +FLIPY I+L + G P+YY+
Sbjct: 104 ANKRERWNNRTEFLLTLVGYTIGLGNVWRFPHLCHKNGGASFLIPYGIMLAVEGIPLYYM 163
Query: 507 ECVLG 521
E +G
Sbjct: 164 ELCIG 168
>SB_22967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Frame = +3
Query: 288 PVNEKKAFE-----DIEGAPERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAF 452
P+ ++K+ E D+E P R W +IEF+ +CI +VG GN WRFP++ ++NGGGA
Sbjct: 86 PMTQEKSVEAPTELDVETRPSRERWDRKIEFMFACIGFAVGYGNFWRFPYMCFKNGGGAC 145
Query: 453 LIPYII 470
I +I
Sbjct: 146 AIAVVI 151
>SB_21548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 66.1 bits (154), Expect = 2e-11
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +3
Query: 312 EDIEGAPERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGG 443
E + ER WSN+I+FL+SCI +VGLGNVWRFP++ Y+NGG
Sbjct: 58 EQVVVIEEREQWSNKIDFLLSCIGYAVGLGNVWRFPYLCYKNGG 101
>SB_6762| Best HMM Match : SNF (HMM E-Value=0)
Length = 507
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +3
Query: 315 DIEGAPERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAFLIPYIIVLFLV 485
+++ ER W + +FL+SCI +VGLGNVWRFP++ Y NGGG I++ FLV
Sbjct: 35 EVQLEDERETWGKKADFLLSCIGFAVGLGNVWRFPYLCYANGGGIGFAS-IVISFLV 90
>SB_26602| Best HMM Match : SNF (HMM E-Value=0)
Length = 721
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +3
Query: 288 PVNEKKAFEDIEGA--PERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAFLIP 461
P+ E D+E +R W N++EF+++ + +VGLGNVWRFP++ +NGGG+ +
Sbjct: 193 PLEENANSMDVEMQVNDDRGGWGNKLEFILATVGYAVGLGNVWRFPYLCQKNGGGSDITS 252
Query: 462 Y-IIVLFLVGKPMYY 503
Y + L G+ YY
Sbjct: 253 YDLPECGLAGRTQYY 267
>SB_32171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 58.8 bits (136), Expect = 3e-09
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +3
Query: 294 NEKKAFEDIEGAPERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAFLI 458
N++K +D+ R W +IEFL +CI +VG GN WRFP++ ++NGGG +++
Sbjct: 99 NDEK--KDLVTVESRERWDRKIEFLFACIGFAVGYGNFWRFPYMCFKNGGGKYVM 151
>SB_15959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +3
Query: 288 PVNEKKAFEDIEGA--PERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGG 443
P+ E D+E +R W N++EF+++ + +VGLGNVWRFP++ +NGG
Sbjct: 18 PLEENANSMDVEMQVNDDRGGWGNKLEFILATVGYAVGLGNVWRFPYLCQKNGG 71
>SB_26603| Best HMM Match : SNF (HMM E-Value=0)
Length = 518
Score = 49.6 bits (113), Expect = 2e-06
Identities = 15/34 (44%), Positives = 27/34 (79%)
Frame = +3
Query: 345 WSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGG 446
W +++E++++ I ++G GNVWRFP++ +NGGG
Sbjct: 41 WGSKVEYILATIGFAIGFGNVWRFPYLCQKNGGG 74
>SB_39042| Best HMM Match : SNF (HMM E-Value=2.7e-17)
Length = 285
Score = 33.9 bits (74), Expect(2) = 0.004
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 447 AFLIPYIIVLFLVGKPMYYLECVLG 521
+FL PY ++LF++G PM+++E +G
Sbjct: 37 SFLFPYFLMLFVIGIPMFFMELSVG 61
Score = 23.4 bits (48), Expect(2) = 0.004
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3
Query: 294 NEKKAFEDIEGAPERMMWSNQIEF 365
NEK +D G P R W+ F
Sbjct: 17 NEKLVIDDEPGVPRRESWNTSFLF 40
>SB_16793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 447 AFLIPYIIVLFLVGKPMYYLECVLG 521
AFL+PYII + + G P+++LE +G
Sbjct: 2 AFLVPYIIFMLIEGLPLFFLELSIG 26
>SB_22164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 144 MSQTHVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
MS T S +P PS N GSP+ RS + PPP+++ P
Sbjct: 4 MSSTDSVRQSQQSVRSPTGTASPSENGSGSPEGSRSPEASSPPPSVQSP 52
>SB_13179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 445 PPPF*YATNGNRHTLPKPTDVAMHDMRNSI*LDHIIRSGA 326
PPPF G R P+PT HD NS H R G+
Sbjct: 156 PPPFLKHKYGKRQMFPRPTAYPTHDKMNSALWPHCSRLGS 195
>SB_49479| Best HMM Match : R3H (HMM E-Value=0.0079)
Length = 605
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 174 DMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEK 302
DMSS+ PT D P K S + D PPP+L++ N++
Sbjct: 3 DMSSDLIPTGADVHQLMGSQPSKKNSARCDKPPPSLRLFQNDR 45
>SB_6709| Best HMM Match : PCNA_C (HMM E-Value=9.8)
Length = 279
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +3
Query: 126 SSVLINMSQTHVNNGFDMSSE-NPPTDRDPSLNRPGSPKPKRSTKPD-LPPPALKVPVNE 299
+S + + S N SS PP+ S N PGSP P + P PPP L
Sbjct: 121 NSTISSTSSNSYNKRVSSSSVIMPPSSHSRSPNSPGSPNPTLFSHPSYYPPPPLDFQAGT 180
Query: 300 KKA 308
K++
Sbjct: 181 KRS 183
>SB_3285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1437
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKKAFEDIEGAPERMMWSN 353
PP+ + + +RPGSP+ KR +PD PP N A + P+R N
Sbjct: 1153 PPSRKRQNDSRPGSPRDKRK-RPDSPPVKWPSTTNNHTATPINQIQPQRQQTPN 1205
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 31.9 bits (69), Expect = 0.33
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +3
Query: 156 HVNNGFDMSSENPPTDRDPSLNRP-GSPKPKRS---TKPDLPP--PALKVPVNEKKAFED 317
H N M PP +R NRP GS +P+ S T+ LP AL+ N
Sbjct: 565 HFNEKGTMPPPAPPANRPEGSNRPEGSNRPEGSNGSTRDTLPSYDQALERLRNSPAV--- 621
Query: 318 IEGAPERMMWSNQ 356
EGAP+R WS +
Sbjct: 622 TEGAPQRFSWSQE 634
>SB_48636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 135 LINMSQTHVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKKA 308
L++ T + F ++ ++ +P + KPK + KP PA K + KKA
Sbjct: 71 LVHTKGTGASGSFKLNKAAVKAEKPKKAKKPAAKKPKAAKKPAAKKPAAKKAKSPKKA 128
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Frame = +3
Query: 135 LINMSQTHVNNGFDMSSENPPTDR-------DPSLNRPGSPKPKRSTKPDLPPPALKVP 290
L+N + ++ N D PP D L P SP P+R T P P P+ + P
Sbjct: 384 LLNTFRNNIRNRKDSMPPRPPKPSTNGQASVDGQLKPPSSPSPRRQTGPPSPKPSRQPP 442
>SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2179
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 237 KPKRSTKPDLPPP-ALKVPVNEKKAFEDIEGAPER 338
KP ST P+LPP +K+ V EKK + +G+ ER
Sbjct: 1164 KPNGSTLPELPPKLCIKLKVKEKKKKKKKKGSDER 1198
>SB_16713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 447 AFLIPYIIVLFLVGKPMYYLECVLG 521
AF IPYI++L L G P+ LE +G
Sbjct: 302 AFFIPYILMLMLEGTPLLCLEMAVG 326
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +3
Query: 162 NNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKP--DLPPPALKVPVNEKKAFEDIEGAPE 335
N G +P + L+R GSP + S+ P D+P L P N + D EG P
Sbjct: 145 NEGVPEQDTDPTLEVAEPLSREGSPTAEESSAPPTDIPDATLTPPPNTQSPVPD-EGPPA 203
Query: 336 RMMWSN 353
+ +
Sbjct: 204 MQQYQD 209
>SB_37947| Best HMM Match : SAP (HMM E-Value=8e-07)
Length = 389
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 126 SSVLINMSQTHVNNGFDMSSE-NPPTDRDPSLNRPGSPKPKRSTKPD-LPPPAL 281
+S + + S N SS PP+ S N PGSP P + P PPP L
Sbjct: 332 NSTISSTSSNSYNKRVSSSSVIMPPSSHSRSPNSPGSPNPTLFSHPSYYPPPPL 385
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 189 NPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
NPP P N P SP P + P PPP K P
Sbjct: 345 NPPP---PPTNNPPSPPPPTNNTPPPPPPTNKPP 375
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 183 SENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
+ NPP+ P+ N P P P + KP PPP P
Sbjct: 351 TNNPPSPPPPTNNTP--PPPPPTNKPPPPPPPTNGP 384
>SB_25705| Best HMM Match : PH (HMM E-Value=2e-17)
Length = 409
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 135 LINMSQTHVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVN 296
L + S+ + + F ++E T+ PS PG K T P PP K PV+
Sbjct: 282 LASQSEAALGDEFYDTAEEE-TESKPSPPPPGEKKAPLPTPPSTPPAVTKAPVS 334
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 168 GFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPP-----ALKVPVNEKKAFEDIEGAP 332
G + + PP+ + + +P KR + PPP A+K + K+ ++++G
Sbjct: 652 GCFLEKKAPPSSKPKTFTPGENPPAKRVEQKPPPPPSRDVAAIKAAIANAKSLDEVQGL- 710
Query: 333 ERMMWSNQI 359
ER++ + Q+
Sbjct: 711 ERLLKAGQV 719
>SB_43151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 174 DMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPP--PALKVPVNEKKA 308
D+ +EN + +P + GS KPK + PP A K V KKA
Sbjct: 325 DVPAENKQDNNEPHTSTTGSDKPKDHLATNAPPVGSAAKQAVAAKKA 371
>SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +3
Query: 162 NNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPA 278
NN N P + + + P KP + P PPPA
Sbjct: 493 NNNIKEEGANTPDNEKSATDTPSDDKPHQDLVPTSPPPA 531
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -2
Query: 334 SGAPSISSKAFFSLTGTFSAGGGRSGFVDRFGLGDPGRFNDGS 206
SGA S SS + +G +S GGG S D GD G DGS
Sbjct: 924 SGASSHSSSPRGTTSGVYSMGGGPSDSDDNGDRGDDGD-GDGS 965
>SB_8905| Best HMM Match : FYVE (HMM E-Value=0.13)
Length = 687
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 264 LPPPALKVPVNEKKA-FEDIEGAPERMMWSNQIEFLMSCIATS 389
LPP + +PV++ KA F+ IE P+R ++ SC++TS
Sbjct: 85 LPPSTVAIPVHQSKATFKVIECDPQRKP-IKEVTTSNSCVSTS 126
>SB_58388| Best HMM Match : Lipocalin (HMM E-Value=7.4)
Length = 246
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 180 SSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPA 278
SS PP P L+ P P P + LPPP+
Sbjct: 154 SSLLPPPSSSPPLSSPPPPPPSTPSSSLLPPPS 186
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 213 SLNRPGSPKPKRSTKPDLP--PPALKVPVNEKKAFEDIE 323
SL+ P S S + D P PP KV V E+K EDI+
Sbjct: 716 SLSSPASMNSDYSLQEDDPDAPPVKKVKVEEEKDLEDIK 754
>SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3)
Length = 169
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 180 SSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKKAFED 317
S PP +R PS +RP P R T P P P +E++ E+
Sbjct: 62 SRPRPPYERPPSESRPRPPYDDRRTSETRPRP----PYDERRVSEN 103
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 180 SSENPP-TDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKK 305
S PP DR PS +RP P +R P P + P +E +
Sbjct: 34 SRPRPPYDDRPPSESRPRPPYDERPPSESRPRPPYERPPSESR 76
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKP-KRSTKPD--LPPP 275
PP R PS RP SP P +RST P PPP
Sbjct: 561 PPRRRSPSPRRP-SPSPRRRSTSPSRKSPPP 590
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKKAFEDIEGAP 332
PP P P P P+ ST P PPP PV + A G+P
Sbjct: 685 PPPPPPPPPPPPPPPPPQPSTPP--PPPPSTPPVQQSGAPGSPAGSP 729
>SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPP 275
PP +DP+ P P+ + +T PPP
Sbjct: 482 PPPSQDPTTGNPSPPQEQPTTGNPTPPP 509
>SB_13985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 195 PTDRDPSLNRPGSPKPKRSTKPDLPPPA 278
P D DP ++RP P +RS D+ P+
Sbjct: 62 PRDIDPDIHRPSDPLAQRSIDTDIHRPS 89
>SB_6248| Best HMM Match : KH_1 (HMM E-Value=1.6e-41)
Length = 487
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -2
Query: 274 GGGRSGFVDRFGLGDPGRFNDGSLSVGGFSEDMSN 170
GGGR GF FG GD GRF D S ++GG + N
Sbjct: 232 GGGRGGFGGDFG-GDGGRF-DAS-NMGGATGGTGN 263
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 189 NPPTDRDPSLNRPGSPKPKRSTKPDLPPP 275
NPP P+ P P P + P PPP
Sbjct: 208 NPPYPPPPNAPNPPYPPPPNAPNPPYPPP 236
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +3
Query: 180 SSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKKA 308
++ NPP P P +P P P+ P P P N + A
Sbjct: 200 NAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPPPNPQFA 242
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 153 THVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
T ++ G +MS PP P P SP P P PPP + P
Sbjct: 355 TDISAGINMSPPPPPPPPPP----PPSPPPPPPPPPPSPPPPPQPP 396
>SB_50198| Best HMM Match : Frizzled (HMM E-Value=0)
Length = 654
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 228 GSPKPKRSTKPDLPPPALKVPVNEKKAFEDIEGAP 332
GS PK S + +PPP+++ + AF I +P
Sbjct: 592 GSAPPKNSLQVHMPPPSVQPVYHHTSAFAPIAPSP 626
>SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33)
Length = 718
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 162 NNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPP 272
NN +D S+N T + S + +P +ST PD PP
Sbjct: 253 NNAYDTDSDNNSTSAEQSRVQSVTPTRSQST-PDWPP 288
>SB_9234| Best HMM Match : Topoisom_I_N (HMM E-Value=0)
Length = 335
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 168 GFDMSSENPPTDRDPSLNRPGSPK 239
G D+ ++ P D+DPS +P PK
Sbjct: 18 GSDLKVKSEPKDKDPSQKKPQKPK 41
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +3
Query: 204 RDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKKAFEDIEGAPE 335
R P+ P SP PK T P P+ + KK E P+
Sbjct: 938 RSPTPTPPPSPPPKEPTPPPSSKPSPVKEIKPKKPIEKFISRPK 981
>SB_41898| Best HMM Match : EGF_CA (HMM E-Value=3.9e-14)
Length = 1087
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 374 VHRYISGLRQRMAVSIRCISKWRRGLPYTLYHSVVFSRQTHVLP 505
VH+ I G + + ++ SKW +G Y L VFS+ ++P
Sbjct: 428 VHKII-GYLPKPKIEMQQFSKWNKGFRYLLMVLDVFSKYGWIIP 470
>SB_29525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +3
Query: 126 SSVLINMSQTHVNNG---FDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
SS LIN S + F SS N PS P SPKP + +PP K P
Sbjct: 260 SSRLINRSTGNSGTASPTFITSSANKHAQLPPSA--PASPKPSTPSSEGMPPAGRKEP 315
>SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 195 PTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
P D P+ PG P P +T P PPP +P
Sbjct: 10 PGDPPPNTAIPGDP-PPNTTIPRAPPPNTAIP 40
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 195 PTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
P DR P+ PG P P P PPP +P
Sbjct: 40 PGDRPPNTPIPGDPPPNIPI-PGNPPPNTPIP 70
>SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 180 SSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVN 296
S + PT P P P+P+ P LP PA+ P N
Sbjct: 250 SQPSNPTATQPQ--NPAIPQPQNPAIPQLPNPAIPQPPN 286
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +3
Query: 231 SPKPKRST--KPDLPPPALKVP 290
+PKP + T KPD PPP +P
Sbjct: 19 TPKPPQPTPPKPDTPPPGTNIP 40
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 138 INMSQTHVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPP 275
I++ +H + ++ PP R P P P P S P PPP
Sbjct: 188 ISIGTSHPTSPSQITQPPPPPPRPPP--SPPPPPPPPSPSPPRPPP 231
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 177 MSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPA 278
+SS PP P P +P P + PPPA
Sbjct: 46 ISSSPPPPPPSPPAAAPAAPPPPAAAPAAPPPPA 79
>SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 141 NMSQTHVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
N SQ N+ DMS P R PSLN+ +P+ ++ PP K+P
Sbjct: 380 NHSQEDFNSE-DMSKIATPQSRIPSLNKHSTPEQTKT------PPKSKIP 422
>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 180 SSENPPTD--RDPSLNRPGSPKPKRSTKPDLPPPAL 281
S +PPTD DP + P P T P PP L
Sbjct: 22 SQTDPPTDPPTDPPTDPPTDPPTDPPTDPPTDPPTL 57
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 144 MSQTHVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPP 275
+ QT V NG + S PP ++N+P + P LPPP
Sbjct: 544 VKQTSVVNGQN-SPNTPPCSPSRNVNKPTNKHFSLVKPPPLPPP 586
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 174 DMSSENPPTDRDPSLNRPGSPKPKRST--KPDLPP 272
DM + NP T+R P P P PKR+ KP+LPP
Sbjct: 554 DMQT-NPDTERRPP---PLPPAPKRALDLKPNLPP 584
>SB_20795| Best HMM Match : Amelogenin (HMM E-Value=1)
Length = 630
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 189 NPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKK 305
+P T P+ +PGS KP ST+P L P + P +K
Sbjct: 23 SPVTQHIPT--KPGSTKPLNSTEPVL--PVTEAPTKRRK 57
>SB_50208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 195 PTDRDPSLNRPGSPKPKRSTK 257
P R P N PGSP+PKRS K
Sbjct: 44 PPSRPPWRN-PGSPEPKRSRK 63
>SB_36894| Best HMM Match : PXA (HMM E-Value=2.5e-13)
Length = 1252
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 117 FN*SSVLINMSQTHVNNGFDMSSENPPT--DRDPSL-NRPGSPKPK 245
F+ SS + + T ++GFD N PT DR+PS+ + G P P+
Sbjct: 781 FSSSSARSSTASTESSSGFDSMEVNLPTSMDREPSVEDANGLPCPE 826
>SB_34623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 147 SQTHVNN--GFDMSSENPPTDRDPSLNRPGSPK-PKRSTKPDLPPP 275
SQT V G S PP R PSL RP S P +P+ PP
Sbjct: 433 SQTFVPRYTGPQQVSYRPPPQRKPSLPRPLSQSTPTIPEEPETAPP 478
>SB_20227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Frame = +3
Query: 189 NPPTDRDPSLNRPGSPK-----PKRSTKPDLPPPALKVPVNEKK 305
+P T RD + N PK PK KP PPP P N KK
Sbjct: 102 SPETIRDENHNNRALPKLITSDPKVKLKPS-PPPVAPRPPNTKK 144
>SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 231 SPKPKRSTKPD-LPPPALKVPVNEKK 305
SP+ +S KP PPP+ K PV+ KK
Sbjct: 761 SPEELKSKKPKPAPPPSPKKPVSSKK 786
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,058,349
Number of Sequences: 59808
Number of extensions: 391062
Number of successful extensions: 1464
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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