Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12g24f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 100 2e-23
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 100 2e-23
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 67 9e-14
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 1.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 1.9
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 5.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.8
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 21 7.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.7
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 21 7.7
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 7.7
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 99.5 bits (237), Expect = 2e-23
Identities = 38/75 (50%), Positives = 58/75 (77%)
Frame = +3
Query: 297 EKKAFEDIEGAPERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAFLIPYIIVL 476
+ AF++I+ P+R MWS++IEF++S + ++GLGN+WRFP++ Y+NGGGAF++PY I L
Sbjct: 6 QSSAFKEIKTLPDRGMWSSKIEFILSVVGLAIGLGNLWRFPYLCYKNGGGAFMVPYFIAL 65
Query: 477 FLVGKPMYYLECVLG 521
L G PM+ +E LG
Sbjct: 66 ALAGVPMFLMELSLG 80
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 99.5 bits (237), Expect = 2e-23
Identities = 38/75 (50%), Positives = 58/75 (77%)
Frame = +3
Query: 297 EKKAFEDIEGAPERMMWSNQIEFLMSCIATSVGLGNVWRFPFVAYQNGGGAFLIPYIIVL 476
+ AF++I+ P+R MWS++IEF++S + ++GLGN+WRFP++ Y+NGGGAF++PY I L
Sbjct: 59 QSSAFKEIKTLPDRGMWSSKIEFILSVVGLAIGLGNLWRFPYLCYKNGGGAFMVPYFIAL 118
Query: 477 FLVGKPMYYLECVLG 521
L G PM+ +E LG
Sbjct: 119 ALAGVPMFLMELSLG 133
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 67.3 bits (157), Expect = 9e-14
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3
Query: 396 LGNVWRFPFVAYQNGGGAFLIPYIIVLFLVGKPMYYLECVLG 521
L NVWRFP++ Y+NGGGAFLIPY + L L G PM+++E LG
Sbjct: 1 LANVWRFPYLCYKNGGGAFLIPYFLTLVLAGIPMFFMELALG 42
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 1.9
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -3
Query: 363 IQFD*TTSYVQEHLLYLRKPSFH*LEPSVPEEVDQVLWIASAWVILDDSMTGPCPSED 190
I FD S L L F ++ SV EVDQ+ W+ S I D G C D
Sbjct: 227 IDFDRMNSLGLSWLDQLTNLGFLGMKESV--EVDQLSWLGSGQYISD--FVGSCRKTD 280
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 1.9
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -3
Query: 363 IQFD*TTSYVQEHLLYLRKPSFH*LEPSVPEEVDQVLWIASAWVILDDSMTGPCPSED 190
I FD S L L F ++ SV EVDQ+ W+ S I D G C D
Sbjct: 265 IDFDRMNSLGLSWLDQLTNLGFLGMKESV--EVDQLSWLGSGQYISD--FVGSCRKTD 318
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 5.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 138 INMSQTHVNNGFDMSSENPPTDRDPSLNRP 227
INM Q NN ++ T P+L+ P
Sbjct: 5 INMDQEKKNNVENLKGGGSTTPASPTLSTP 34
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = -2
Query: 274 GGGRSGFVDRFGLGDPGRFNDGSLSVGGFSEDMSN 170
G G + D G + + S+GG + D+S+
Sbjct: 454 GNGTKLIIKNVDYADTGAYMCQASSIGGITRDISS 488
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.0 bits (42), Expect = 7.7
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2
Query: 428 ISKWRRGLPYTL 463
+ +WR G+P TL
Sbjct: 83 VPRWRNGIPATL 94
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 147 SQTHVNNGFDMSSENPPTDRDPSLNR 224
S+ + +N M S PPT + LNR
Sbjct: 621 SRENTSNTTSMESFKPPTLTESLLNR 646
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 262 SGFVDRFGLGD 230
+GF+D GLGD
Sbjct: 213 AGFIDGLGLGD 223
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 348 TTSYVQEHLLYLRKPSFH*LEPS 280
T + QE LY KPS+ EP+
Sbjct: 399 TPVFHQEMALYYLKPSYDAQEPA 421
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,336
Number of Sequences: 438
Number of extensions: 4011
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -