Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12g24f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g00060.1 68417.m00006 nucleotidyltransferase family protein c... 34 0.050
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.088
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 32 0.20
At5g14460.1 68418.m01692 pseudouridylate synthase TruB family pr... 31 0.36
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 31 0.47
At4g19570.1 68417.m02877 DNAJ heat shock N-terminal domain-conta... 30 0.82
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 30 0.82
At5g09850.1 68418.m01139 transcription elongation factor-related... 30 1.1
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 1.4
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 29 1.4
At3g63180.1 68416.m07097 expressed protein 29 1.4
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 1.4
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 29 1.4
At4g34440.1 68417.m04894 protein kinase family protein contains ... 29 1.9
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 1.9
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 29 1.9
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 2.5
At3g07195.1 68416.m00858 proline-rich family protein 28 3.3
At1g61850.1 68414.m06979 patatin family protein similar to membr... 28 3.3
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 28 3.3
At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 3.3
At1g17790.1 68414.m02202 DNA-binding bromodomain-containing prot... 28 3.3
At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family... 28 4.4
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 28 4.4
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 28 4.4
At3g18810.1 68416.m02389 protein kinase family protein contains ... 28 4.4
At2g45180.1 68415.m05625 protease inhibitor/seed storage/lipid t... 28 4.4
At2g26410.1 68415.m03169 calmodulin-binding family protein simil... 28 4.4
At1g30810.1 68414.m03767 transcription factor jumonji (jmj) fami... 28 4.4
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 27 5.8
At1g23540.1 68414.m02960 protein kinase family protein contains ... 27 5.8
At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family pr... 27 5.8
At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family pr... 27 5.8
At4g13140.1 68417.m02046 expressed protein 27 7.7
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 27 7.7
At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase, p... 27 7.7
>At4g00060.1 68417.m00006 nucleotidyltransferase family protein
contains Pfam profile: PF01909 nucleotidyltransferase
domain
Length = 839
Score = 34.3 bits (75), Expect = 0.050
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 132 VLINMSQTHVNNGFDMSSEN-PPTDRD-PSLNRPGSPKPKRSTKPDLPPPALKVPVNEKK 305
++ NMS++ +D S N PPT R+ P + RP P P P P P PV+ +
Sbjct: 306 IIPNMSKSEYKRSYDTKSPNVPPTRREHPRIKRP--PSPVVLCVPRAPRPPPPSPVSNSR 363
Query: 306 A 308
A
Sbjct: 364 A 364
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 33.5 bits (73), Expect = 0.088
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 210 PSLNRPGSPKPKRSTKPDLPPPALKVPVNE 299
P+L P PKP+ S KP P P + P +E
Sbjct: 427 PNLEEPSKPKPEESPKPQQPSPKPETPSHE 456
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 162 NNGFDMSSENPP--TDRDPSLNRPGSPKPKRSTKPDLP 269
+NG S NPP ++ PS P PKP S+KP+ P
Sbjct: 388 SNGGSSPSPNPPRTSEPKPSKPEPVMPKPSDSSKPETP 425
>At5g14460.1 68418.m01692 pseudouridylate synthase TruB family
protein similar to SP|P09171 tRNA pseudouridine synthase
B (EC 4.2.1.70) (tRNA pseudouridine 55 synthase)
(Pseudouridylate synthase) (Uracil hydrolyase)
{Escherichia coli O157:H7}; contains Pfam profile
PF01509: TruB family pseudouridylate synthase (N
terminal domain)
Length = 540
Score = 31.5 bits (68), Expect = 0.36
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = +3
Query: 126 SSVLINMSQTHVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKK 305
+S+ ++ + T +DM N PT S NR PK S PD P V+ K
Sbjct: 40 ASLFLSTTSTRYPLQYDMII-NRPTQSSLSQNRRRPPKAIESGAPDSAEPEFDSWVDNKL 98
Query: 306 AFEDIEGAP 332
A E +G P
Sbjct: 99 AMEREQGRP 107
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEK 302
PP P +++P + P TKP LPPPA PV K
Sbjct: 57 PPPVYTPPVHKP-TLSPPVYTKPTLPPPAYTPPVYNK 92
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +3
Query: 189 NPPTDRDPSLNRP---GSPKPKRSTKPDLPPPALK 284
+PP + PSL+ P + P TKP LPPP K
Sbjct: 148 SPPVNNKPSLSPPVYKPTLSPPVYTKPTLPPPVYK 182
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +3
Query: 189 NPPTDRDPSLNRPGSPKPKRST---KPDLPPPALKVPVNE 299
+PP P +N+P P P + KP LPPP PV++
Sbjct: 29 SPPVYTSP-VNKPTLPPPVYTPPVHKPTLPPPVYTPPVHK 67
>At4g19570.1 68417.m02877 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q9QYI4
DnaJ homolog subfamily B member 12 {Mus musculus};
contains Pfam profile PF00226: DnaJ domain
Length = 558
Score = 30.3 bits (65), Expect = 0.82
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 183 SENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPV 293
S+ P + P+ P P+PKR +P++P P + +P+
Sbjct: 156 SDKPASSYGPT--PPPEPRPKRRPRPNIPEPDIPMPM 190
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKV 287
PPT P P SP P P PPPA V
Sbjct: 68 PPTSPPPPSPPPPSPPPPSPPPPSPPPPAFAV 99
>At5g09850.1 68418.m01139 transcription elongation factor-related
low similarity to SP|P10712 Transcription elongation
factor S-II (Transcription elongation factor A) {Mus
musculus}
Length = 353
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 165 NGFDMSSENPPTDRDPSLNRPGSPKPKRST----KPDLPPPALK-VPVNEKKAFEDIEGA 329
NG+ SS+N RP +P+P+R + KP P P+ + +P +++ D + A
Sbjct: 244 NGYSSSSKNSNITEPERKPRPVAPQPRRESPSPAKPSRPSPSQQTIPRDKEHKEVDFDTA 303
Query: 330 PERM 341
+R+
Sbjct: 304 RKRL 307
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +3
Query: 156 HVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKK 305
HV ++ N ++ SL P P P +TKP P PALK P K
Sbjct: 13 HVFTNVVFAASNEESNALVSLPTPTLPSPSPATKP--PSPALKPPTPSYK 60
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPP 275
PP+ PS++ P SP S+ P PPP
Sbjct: 45 PPSKPSPSMSPPPSPSLPLSSSPPPPPP 72
>At3g63180.1 68416.m07097 expressed protein
Length = 978
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 126 SSVLINMSQTHVNNGFDMSSENPPTDRDP--SLNRPGSPKPKRSTKPDLPPPALKVPVN 296
S +L SQ HV NG ++S+ N + R P+P ++ +P PA P N
Sbjct: 488 SPILSLNSQPHVRNGDNISAPNVKASESGHFASTRQNKPQPPPASISVVPAPAFIYPAN 546
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLP-PPALKVPVNEKK 305
PP + P+ P +PKP P P PP K P + K
Sbjct: 114 PPIVKPPTKPPPSTPKPPTKPPPSTPKPPTTKPPPSTPK 152
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKP--DLPPPALKVPVN 296
PP PS P P PK+S+ P LPPP P N
Sbjct: 56 PPPSCTPSPPPPSPPPPKKSSCPPSPLPPPPPPPPPN 92
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 162 NNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKP 260
NN D S+ +PP+ + + GSP P RS P
Sbjct: 136 NNNRDGSTPSPPSSGNRTSGDGGSPSPPRSISP 168
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
P P P SP P ST PPP+ +P
Sbjct: 29 PAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLP 61
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 180 SSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPA 278
S +PPT+ + P + P +T P PPP+
Sbjct: 14 SPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPS 46
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPP 275
PP + PS N P P S P +PPP
Sbjct: 9 PPLPQPPSQNSLAPPPPPPSLPPPVPPP 36
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVN 296
P D+ P + SP P +T P LPP L P++
Sbjct: 64 PANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLS 98
>At3g07195.1 68416.m00858 proline-rich family protein
Length = 225
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALK 284
PP + +P +PKP + P PPP K
Sbjct: 52 PPPQPARRIQKPEAPKPVKQDTPRAPPPTEK 82
>At1g61850.1 68414.m06979 patatin family protein similar to
membrane-associated calcium-independent phospholipase A2
gamma; IPLA2 gamma [Homo sapiens] GI:8453174; contains
Patatin domain PF01734, PF00514:
Armadillo/beta-catenin-like repeat
Length = 1265
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -3
Query: 315 LRKPSFH*LEPSVPEEVDQVLWIASAWVILDDSMTGPCPSEDSPRTCRTHCSH 157
+ KP+ L+ S P+EV VL + + DS++ ++D + ++ C+H
Sbjct: 323 IMKPTETVLKSSSPDEVISVLQVVVTLAFVSDSVSQKMLTKDMLKALKSLCAH 375
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 189 NPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
+PP P P P P+ P LPPPA P
Sbjct: 75 SPPPCPPPPSPPPSPPPPQLPPPPQLPPPAPPKP 108
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 177 MSSENPPTDRDPSLNRPGS-PKPKRSTKPDLPPPALKVP 290
++S +PPT+ P P S P P + P LPPP L P
Sbjct: 138 ITSPSPPTNPPPPPESPPSLPAPDPPSNP-LPPPKLVPP 175
>At1g17790.1 68414.m02202 DNA-binding bromodomain-containing protein
similar to SP|P13709 Female sterile homeotic protein
(Fragile-chorion membrane protein) {Drosophila
melanogaster}; contains Pfam profile PF00439:
Bromodomain
Length = 487
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 234 PKPKRSTKPDLPPPALKVPVNEKKAFE 314
P P S+ P PPP + PV E + +E
Sbjct: 271 PSPSPSSPPPPPPPPVAAPVLENRTWE 297
>At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family
protein Common family members: At5g26070, At5g19800,
At1g72790 [Arabidopsis thaliana]
Length = 575
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 141 NMSQTHVNNGFDMSSENPPTDRDPSLNRPGSP--KPKRSTKPDLPPPALKVPVNEKKAFE 314
N+S+T + + SE D + +P SP +P + P PPP ++VP ++
Sbjct: 216 NLSKTEIE---EEESEPKEIQIDTFVVKPSSPPQQPPATPPPPPPPPPVEVPQKPRRTHR 272
Query: 315 DI 320
+
Sbjct: 273 SV 274
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKKAFEDIEGAP 332
P + PS +RP PKRS P PP K P K +F P
Sbjct: 142 PGSSPSPSPSRP----PKRSRGPPRPPTRPKSPPPRKSSFPPSRSPP 184
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKKAFEDIEGAP 332
P + PS +RP PKRS P PP K P K +F P
Sbjct: 142 PGSSPSPSPSRP----PKRSRGPPRPPTRPKSPPPRKSSFPPSRSPP 184
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 174 DMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPP 275
D SS +PP P + GSP+P S P P
Sbjct: 34 DSSSPSPPAPPPPDDSSNGSPQPPSSDSQSPPSP 67
>At2g45180.1 68415.m05625 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to 14 kDa
polypeptide [Catharanthus roseus] GI:407410; contains
Pfam protease inhibitor/seed storage/LTP family domain
PF00234
Length = 134
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 171 FDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPV 293
F S++ PPT P P SPK + KP P LK+ V
Sbjct: 22 FVTSTKCPPTTPKPP-KTPKSPKKAPAVKPTCPTDTLKLGV 61
>At2g26410.1 68415.m03169 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 516
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +3
Query: 186 ENPPTDRDPS-LNRPGSPKPKR---STKPDLPPPALKVP 290
E PP D PS ++RP P P + +P LPPP+ P
Sbjct: 38 ETPPVDPSPSSVHRPYPPPPPLPDFAPQPLLPPPSPPPP 76
>At1g30810.1 68414.m03767 transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein
contains similarity to Swiss-Prot:P29375
retinoblastoma-binding protein 2 (RBBP-2) [Homo
sapiens]; contains Pfam domains PF02375: jmjN domain and
PF02373: jmjC domain; intron between exons 6 and 7 was
required to circumvent a frameshift. There could be an
underlying sequence error.
Length = 787
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +3
Query: 174 DMSSENPPTDRDPS----LNRPGSPKPKRSTKPDLPPPALKVPVNEKKAF 311
DMS +N P D+D + +P SP+ ++ LP A + +N+ F
Sbjct: 13 DMSLKNHPPDKDKDKDTIMEQPSSPRHRKVVARWLPDEAQRPIINDAPVF 62
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 180 SSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
S+ PP PS G+ + + P PPP ++P
Sbjct: 616 SAPPPPPPPPPSFGSTGNKRQAQPPPPPPPPPPTRIP 652
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 183 SENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
S PP+D P ++ SP P S + PP + P
Sbjct: 77 SPPPPSDSSPPVDSTPSPPPPTSNESPSPPEDSETP 112
>At1g06170.2 68414.m00649 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 120 N*SSVLINMSQTHVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKP 260
N S + ++ QT N G ++ + + D LNR G KR P
Sbjct: 173 NGSFMGVDQDQTETNQGVNLMYDEENNNLDDGLNRKGRGSKKRKIFP 219
>At1g06170.1 68414.m00648 basic helix-loop-helix (bHLH) family
protein contains Pfam profile:PF00010 helix-loop-helix
DNA-binding domain
Length = 420
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 120 N*SSVLINMSQTHVNNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKP 260
N S + ++ QT N G ++ + + D LNR G KR P
Sbjct: 173 NGSFMGVDQDQTETNQGVNLMYDEENNNLDDGLNRKGRGSKKRKIFP 219
>At4g13140.1 68417.m02046 expressed protein
Length = 137
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 319 ISSKAFFSLTGTFSAGGGRSGFVDRFGLG--DPGRFNDGSLSV 197
I + S+T G SGFV+RF +G +P F G+L +
Sbjct: 25 IGKEKALSITQAVQKYGNLSGFVERFSVGMRNPTAFFAGALGI 67
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 216 LNRPGSPKPKRSTKPDLPPP 275
L+ P SP P S+ P LPPP
Sbjct: 39 LSPPPSPPPSPSSPPRLPPP 58
>At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
GI:5669871 [Zea mays]; contains Pfam profiles PF00198:
2-oxo acid dehydrogenases acyltransferase (catalytic
domain), PF00364: Biotin-requiring enzyme, PF02817: e3
binding domain
Length = 539
Score = 27.1 bits (57), Expect = 7.7
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKV---PVNEKKA------FEDIEG-APE-R 338
P ++ + +P SP +++KP PP +V P+ K A DIEG PE R
Sbjct: 216 PAPPKEEKVKQPSSPPEPKASKPSTPPTGDRVFASPLARKLAEDNNVPLSDIEGTGPEGR 275
Query: 339 MMWSNQIEFLMS 374
++ ++ E+L S
Sbjct: 276 IVKADIDEYLAS 287
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,481,790
Number of Sequences: 28952
Number of extensions: 285565
Number of successful extensions: 1267
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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