Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g22r
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.4  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   5.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   5.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.6  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 105 NSSCSPVLCYWTCSFSRRWRSDXKYVDH 22
           +++   V+CYW    + RW +    VDH
Sbjct: 20  SATTDKVVCYWGTWSTYRWGNGRFTVDH 47


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 146 SHSGRELFGCSVERILLVRRSYVIGHVHFH-GDGVQXPS 33
           +H+G + F C +     +R  ++  HV  H G+G +  S
Sbjct: 368 THTGEKRFACPICNKRFMRSDHLAKHVKTHNGNGKKGSS 406


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 293 YQPENVYTIWWS 328
           Y+P  VY  WWS
Sbjct: 260 YRPYPVYNQWWS 271


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 41  SERHRRENEHVQ*HKTGEQEE 103
           +E+ RRE E  + HK  +QE+
Sbjct: 72  NEQARREREEQERHKQQQQEK 92


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 287 VRCDDYGRSDVFSN 246
           +R DD+GR   FSN
Sbjct: 557 IRGDDFGRGQDFSN 570


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 41  SERHRRENEHVQ*HKTGEQEE 103
           +E+ RRE E  + HK  +QE+
Sbjct: 223 NEQARREREEQERHKQQQQEK 243


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 41  SERHRRENEHVQ*HKTGEQEE 103
           +E+ RRE E  + HK  +QE+
Sbjct: 282 NEQARREREEQERHKQQQQEK 302


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 65   HFHGDGVQXPSTW 27
            H H D    PSTW
Sbjct: 1030 HMHPDWTTKPSTW 1042


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,091
Number of Sequences: 336
Number of extensions: 3867
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)