Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12g22r
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S78203-1|AAB34388.1| 729|Homo sapiens PEPT 2 protein. 121 3e-27
BC044572-1|AAH44572.1| 729|Homo sapiens solute carrier family 1... 120 7e-27
AY634368-1|AAT48121.1| 705|Homo sapiens macrophage oligopeptide... 115 1e-25
U21936-1|AAA63797.1| 708|Homo sapiens peptide transporter protein. 113 6e-25
U13173-1|AAB61693.1| 708|Homo sapiens intestinal H+/peptide cot... 113 6e-25
BC096329-1|AAH96329.1| 708|Homo sapiens solute carrier family 1... 113 6e-25
BC096328-1|AAH96328.1| 708|Homo sapiens solute carrier family 1... 113 6e-25
BC096327-1|AAH96327.1| 708|Homo sapiens solute carrier family 1... 113 6e-25
AL391670-1|CAH70393.1| 708|Homo sapiens solute carrier family 1... 113 6e-25
AL353574-2|CAI15619.1| 708|Homo sapiens solute carrier family 1... 113 6e-25
AF043233-1|AAC15477.1| 708|Homo sapiens Caco-2 oligopeptide tra... 113 8e-25
BC037974-1|AAH37974.1| 581|Homo sapiens solute carrier family 1... 49 1e-05
AF135600-1|AAQ13565.1| 581|Homo sapiens osteoclast transporter ... 49 1e-05
AB020598-1|BAA93432.1| 581|Homo sapiens peptide transporter 3 p... 49 1e-05
BC028394-1|AAH28394.2| 512|Homo sapiens SLC15A4 protein protein. 46 1e-04
AY050629-1|AAK95565.1| 633|Homo sapiens peptide/histidine trans... 46 1e-04
AY038999-1|AAK72099.1| 577|Homo sapiens peptide/histidine trans... 46 1e-04
AF040248-1|AAC00002.1| 107|Homo sapiens erythroid differentiati... 38 0.036
BC004992-1|AAH04992.1| 478|Homo sapiens zinc finger protein 577... 34 0.59
BC065575-1|AAH65575.1| 395|Homo sapiens TRIM6 protein protein. 31 3.1
BC047564-1|AAH47564.1| 516|Homo sapiens tripartite motif-contai... 31 3.1
AK027664-1|BAB55276.1| 488|Homo sapiens protein ( Homo sapiens ... 31 3.1
AF220030-1|AAG53484.1| 488|Homo sapiens tripartite motif protei... 31 3.1
X79981-1|CAA56306.1| 784|Homo sapiens VE-cadherin protein. 30 9.6
X59796-1|CAA42468.1| 780|Homo sapiens cadherin-5 protein. 30 9.6
U84722-1|AAB41796.1| 784|Homo sapiens vascular endothelial cadh... 30 9.6
BC117520-1|AAI17521.1| 669|Homo sapiens CDH5 protein protein. 30 9.6
BC096365-1|AAH96365.1| 662|Homo sapiens CDH5 protein protein. 30 9.6
BC096364-1|AAH96364.3| 669|Homo sapiens CDH5 protein protein. 30 9.6
BC096363-1|AAH96363.1| 669|Homo sapiens CDH5 protein protein. 30 9.6
AB209908-1|BAD93145.1| 807|Homo sapiens cadherin 5, type 2 prep... 30 9.6
AB035304-1|BAA87418.1| 784|Homo sapiens cadherin-5 protein. 30 9.6
>S78203-1|AAB34388.1| 729|Homo sapiens PEPT 2 protein.
Length = 729
Score = 121 bits (291), Expect = 3e-27
Identities = 58/118 (49%), Positives = 82/118 (69%)
Frame = -1
Query: 397 GAVYTINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQA 218
GA Y + +T+ QA + P N + I W +PQY ++T GEVMFSVTGLEFS++QA
Sbjct: 578 GAAYLFVITNNTNQGLQAWKIEDIPANKMSIRWQLPQYALVTAGEVMFSVTGLEFSYSQA 637
Query: 217 PASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMAF 44
P+SMKSVLQ+ WLLT+A GN+IV+++ + + L QW EF LF+ L+L+ IF+ M +
Sbjct: 638 PSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGL-VQWAEFILFSCLLLVICLIFSIMGY 694
>BC044572-1|AAH44572.1| 729|Homo sapiens solute carrier family 15
(H+/peptide transporter), member 2 protein.
Length = 729
Score = 120 bits (288), Expect = 7e-27
Identities = 57/118 (48%), Positives = 81/118 (68%)
Frame = -1
Query: 397 GAVYTINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQA 218
GA Y + +T+ QA + P N + I W +PQY ++T GEVMFSVTGLEFS++QA
Sbjct: 578 GAAYLFVITNNTNQGLQAWKIEDIPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQA 637
Query: 217 PASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMAF 44
P+ MKSVLQ+ WLLT+A GN+IV+++ + + L QW EF LF+ L+L+ IF+ M +
Sbjct: 638 PSGMKSVLQAAWLLTIAVGNIIVLVVAQFSGL-VQWAEFILFSCLLLVICLIFSIMGY 694
>AY634368-1|AAT48121.1| 705|Homo sapiens macrophage oligopeptide
transporter PEPT1 protein.
Length = 705
Score = 115 bits (277), Expect = 1e-25
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 2/218 (0%)
Frame = -1
Query: 649 NSFFINREGISNFTDNNDKAINGVSVRFLSNVQTSVTVAIVESKKNKTKLSLQSDDISQV 470
N + + ++G++ +K NG+ RF++ +T+ + S S +
Sbjct: 468 NHYQVVKDGLNQ---KPEKGENGI--RFVNTFNELITITMSGKVYAAYNASTYQFFPSGI 522
Query: 469 K-ITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYEDTDGAYQANPVIITPPNSIHILWLI 293
K T + ++ Q + + G+ YT V D + N++++ I
Sbjct: 523 KGFTISSTEIPPQCQPNFNTFYLEFGSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQI 582
Query: 292 PQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQ 113
PQY ++T GEV+FSVTGLEFS++QAP++MKSVLQ+ WLLTVA GN+IV+++ Q
Sbjct: 583 PQYFLLTCGEVVFSVTGLEFSYSQAPSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFSKQ 642
Query: 112 WKEFFLFAGLMLLDMFIFTAMA-FRXQVRGSQIEHRGG 2
W E+ LFA L+L+ IF MA F + ++IE + G
Sbjct: 643 WAEYILFAALLLVVCVIFAIMARFYTYINPAEIEAQFG 680
>U21936-1|AAA63797.1| 708|Homo sapiens peptide transporter protein.
Length = 708
Score = 113 bits (272), Expect = 6e-25
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = -1
Query: 397 GAVYTINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQA 218
G+ YT V D + N++++ IPQY ++T GEV+FSVTGLEFS++QA
Sbjct: 551 GSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQYFLLTCGEVVFSVTGLEFSYSQA 610
Query: 217 PASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA-FR 41
P++MKSVLQ+ WLLTVA GN+IV+++ QW E+ LFA L+L+ IF MA F
Sbjct: 611 PSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFSKQWAEYILFAALLLVVCVIFAIMARFY 670
Query: 40 XQVRGSQIE 14
+ ++IE
Sbjct: 671 TYINPAEIE 679
>U13173-1|AAB61693.1| 708|Homo sapiens intestinal H+/peptide
cotransporter protein.
Length = 708
Score = 113 bits (272), Expect = 6e-25
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = -1
Query: 397 GAVYTINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQA 218
G+ YT V D + N++++ IPQY ++T GEV+FSVTGLEFS++QA
Sbjct: 551 GSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQYFLLTCGEVVFSVTGLEFSYSQA 610
Query: 217 PASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA-FR 41
P++MKSVLQ+ WLLTVA GN+IV+++ QW E+ LFA L+L+ IF MA F
Sbjct: 611 PSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFSKQWAEYILFAALLLVVCVIFAIMARFY 670
Query: 40 XQVRGSQIE 14
+ ++IE
Sbjct: 671 TYINPAEIE 679
>BC096329-1|AAH96329.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 113 bits (272), Expect = 6e-25
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = -1
Query: 397 GAVYTINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQA 218
G+ YT V D + N++++ IPQY ++T GEV+FSVTGLEFS++QA
Sbjct: 551 GSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQYFLLTCGEVVFSVTGLEFSYSQA 610
Query: 217 PASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA-FR 41
P++MKSVLQ+ WLLTVA GN+IV+++ QW E+ LFA L+L+ IF MA F
Sbjct: 611 PSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFSKQWAEYILFAALLLVVCVIFAIMARFY 670
Query: 40 XQVRGSQIE 14
+ ++IE
Sbjct: 671 TYINPAEIE 679
>BC096328-1|AAH96328.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 113 bits (272), Expect = 6e-25
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = -1
Query: 397 GAVYTINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQA 218
G+ YT V D + N++++ IPQY ++T GEV+FSVTGLEFS++QA
Sbjct: 551 GSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQYFLLTCGEVVFSVTGLEFSYSQA 610
Query: 217 PASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA-FR 41
P++MKSVLQ+ WLLTVA GN+IV+++ QW E+ LFA L+L+ IF MA F
Sbjct: 611 PSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFSKQWAEYILFAALLLVVCVIFAIMARFY 670
Query: 40 XQVRGSQIE 14
+ ++IE
Sbjct: 671 TYINPAEIE 679
>BC096327-1|AAH96327.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 113 bits (272), Expect = 6e-25
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = -1
Query: 397 GAVYTINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQA 218
G+ YT V D + N++++ IPQY ++T GEV+FSVTGLEFS++QA
Sbjct: 551 GSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQYFLLTCGEVVFSVTGLEFSYSQA 610
Query: 217 PASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA-FR 41
P++MKSVLQ+ WLLTVA GN+IV+++ QW E+ LFA L+L+ IF MA F
Sbjct: 611 PSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFSKQWAEYILFAALLLVVCVIFAIMARFY 670
Query: 40 XQVRGSQIE 14
+ ++IE
Sbjct: 671 TYINPAEIE 679
>AL391670-1|CAH70393.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 113 bits (272), Expect = 6e-25
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = -1
Query: 397 GAVYTINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQA 218
G+ YT V D + N++++ IPQY ++T GEV+FSVTGLEFS++QA
Sbjct: 551 GSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQYFLLTCGEVVFSVTGLEFSYSQA 610
Query: 217 PASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA-FR 41
P++MKSVLQ+ WLLTVA GN+IV+++ QW E+ LFA L+L+ IF MA F
Sbjct: 611 PSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFSKQWAEYILFAALLLVVCVIFAIMARFY 670
Query: 40 XQVRGSQIE 14
+ ++IE
Sbjct: 671 TYINPAEIE 679
>AL353574-2|CAI15619.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 113 bits (272), Expect = 6e-25
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = -1
Query: 397 GAVYTINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQA 218
G+ YT V D + N++++ IPQY ++T GEV+FSVTGLEFS++QA
Sbjct: 551 GSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQYFLLTCGEVVFSVTGLEFSYSQA 610
Query: 217 PASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA-FR 41
P++MKSVLQ+ WLLTVA GN+IV+++ QW E+ LFA L+L+ IF MA F
Sbjct: 611 PSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFSKQWAEYILFAALLLVVCVIFAIMARFY 670
Query: 40 XQVRGSQIE 14
+ ++IE
Sbjct: 671 TYINPAEIE 679
>AF043233-1|AAC15477.1| 708|Homo sapiens Caco-2 oligopeptide
transporter protein.
Length = 708
Score = 113 bits (271), Expect = 8e-25
Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = -1
Query: 397 GAVYTINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQA 218
G+ YT V D + N++++ IPQY ++T GEV+FSVTGLEFS++QA
Sbjct: 551 GSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQYFLLTCGEVVFSVTGLEFSYSQA 610
Query: 217 PASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA-FR 41
P++MKSVLQ+ WLLTVA GN+IV+++ QW E+ LFA L+L+ +F MA F
Sbjct: 611 PSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFSKQWAEYILFAALLLVVCVVFAIMARFY 670
Query: 40 XQVRGSQIE 14
+ ++IE
Sbjct: 671 TYINPAEIE 679
>BC037974-1|AAH37974.1| 581|Homo sapiens solute carrier family 15,
member 3 protein.
Length = 581
Score = 49.2 bits (112), Expect = 1e-05
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = -1
Query: 313 IHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLIVVLIVE 134
+ I W IPQY+++ + E+ S+ GLEF++++AP SM+ + ++ G+L+ +V
Sbjct: 456 LSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSSLVA 515
Query: 133 GNFLDAQW 110
L W
Sbjct: 516 LLSLPGGW 523
>AF135600-1|AAQ13565.1| 581|Homo sapiens osteoclast transporter
hOCTP protein.
Length = 581
Score = 49.2 bits (112), Expect = 1e-05
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = -1
Query: 313 IHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLIVVLIVE 134
+ I W IPQY+++ + E+ S+ GLEF++++AP SM+ + ++ G+L+ +V
Sbjct: 456 LSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSSLVA 515
Query: 133 GNFLDAQW 110
L W
Sbjct: 516 LLSLPGGW 523
>AB020598-1|BAA93432.1| 581|Homo sapiens peptide transporter 3
protein.
Length = 581
Score = 49.2 bits (112), Expect = 1e-05
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = -1
Query: 313 IHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLIVVLIVE 134
+ I W IPQY+++ + E+ S+ GLEF++++AP SM+ + ++ G+L+ +V
Sbjct: 456 LSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLLGSSLVA 515
Query: 133 GNFLDAQW 110
L W
Sbjct: 516 LLSLPGGW 523
>BC028394-1|AAH28394.2| 512|Homo sapiens SLC15A4 protein protein.
Length = 512
Score = 46.4 bits (105), Expect = 1e-04
Identities = 16/54 (29%), Positives = 34/54 (62%)
Frame = -1
Query: 313 IHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLI 152
+ + W +PQY+++ + E+ S+ GLEF+++ AP SM+S + ++ G+ +
Sbjct: 384 LSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFV 437
>AY050629-1|AAK95565.1| 633|Homo sapiens peptide/histidine
transporter protein.
Length = 633
Score = 46.4 bits (105), Expect = 1e-04
Identities = 16/54 (29%), Positives = 34/54 (62%)
Frame = -1
Query: 313 IHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLI 152
+ + W +PQY+++ + E+ S+ GLEF+++ AP SM+S + ++ G+ +
Sbjct: 449 LSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFV 502
>AY038999-1|AAK72099.1| 577|Homo sapiens peptide/histidine
transporter protein.
Length = 577
Score = 46.4 bits (105), Expect = 1e-04
Identities = 16/54 (29%), Positives = 34/54 (62%)
Frame = -1
Query: 313 IHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLI 152
+ + W +PQY+++ + E+ S+ GLEF+++ AP SM+S + ++ G+ +
Sbjct: 449 LSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFV 502
>AF040248-1|AAC00002.1| 107|Homo sapiens erythroid
differentiation-related factor 2 protein.
Length = 107
Score = 37.9 bits (84), Expect = 0.036
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = -1
Query: 346 ANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVA 167
A V+ + WL+ +++T+GE+ S GL + AP M+ + +W A
Sbjct: 3 AQDVLANGGAGVSPFWLVGSILMLTLGELCLSPIGLATTLL-APERMRGQMMGLWFCASA 61
Query: 166 FGNLIVVLI 140
GNL LI
Sbjct: 62 LGNLAAGLI 70
>BC004992-1|AAH04992.1| 478|Homo sapiens zinc finger protein 577
protein.
Length = 478
Score = 33.9 bits (74), Expect = 0.59
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -3
Query: 227 HTSAS*YEVCTTIGLA--SHCRFWKFDRCSHSGRELFGCSVERILLVRRSYVIGHVHFH- 57
HT Y C+ G A CR + R SH+G +L+GCSV +++Y+ H H
Sbjct: 229 HTGEKPYR-CSECGKAFSRKCRLNRHQR-SHTGEKLYGCSVCGKAFSQKAYLTAHQRLHT 286
Query: 56 GD 51
GD
Sbjct: 287 GD 288
>BC065575-1|AAH65575.1| 395|Homo sapiens TRIM6 protein protein.
Length = 395
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 TSWRL--CEREL*TSY*KHHFAHSHHNVLRYQPENVY-TIWWSYNH 337
T+W L C L ++ +HFA +H RYQP++ Y I +NH
Sbjct: 272 TAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNH 317
>BC047564-1|AAH47564.1| 516|Homo sapiens tripartite
motif-containing 6 protein.
Length = 516
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 TSWRL--CEREL*TSY*KHHFAHSHHNVLRYQPENVY-TIWWSYNH 337
T+W L C L ++ +HFA +H RYQP++ Y I +NH
Sbjct: 393 TAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNH 438
>AK027664-1|BAB55276.1| 488|Homo sapiens protein ( Homo sapiens
cDNA FLJ14758 fis, clone NT2RP3003251, weakly similar to
52 KD RO PROTEIN. ).
Length = 488
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 TSWRL--CEREL*TSY*KHHFAHSHHNVLRYQPENVY-TIWWSYNH 337
T+W L C L ++ +HFA +H RYQP++ Y I +NH
Sbjct: 365 TAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNH 410
>AF220030-1|AAG53484.1| 488|Homo sapiens tripartite motif protein
TRIM6 protein.
Length = 488
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 TSWRL--CEREL*TSY*KHHFAHSHHNVLRYQPENVY-TIWWSYNH 337
T+W L C L ++ +HFA +H RYQP++ Y I +NH
Sbjct: 365 TAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNH 410
>X79981-1|CAA56306.1| 784|Homo sapiens VE-cadherin protein.
Length = 784
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 547 SVTVAIVESKKNKTKLSLQSDDISQVKITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYE 368
++T ++ K+ + ++ +++ D ++ G VLV Q + + + F + YT V E
Sbjct: 210 TITKSLDREKQARYEIVVEARDAQGLRGDSGTATVLVTLQDINDNFPFFTQTKYTFVVPE 269
Query: 367 DTDGAYQANPVIITPPN 317
DT + + P+
Sbjct: 270 DTRVGTSVGSLFVEDPD 286
>X59796-1|CAA42468.1| 780|Homo sapiens cadherin-5 protein.
Length = 780
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 547 SVTVAIVESKKNKTKLSLQSDDISQVKITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYE 368
++T ++ K+ + ++ +++ D ++ G VLV Q + + + F + YT V E
Sbjct: 206 TITKSLDREKQARYEIVVEARDAQGLRGDSGTATVLVTLQDINDNFPFFTQTKYTFVVPE 265
Query: 367 DTDGAYQANPVIITPPN 317
DT + + P+
Sbjct: 266 DTRVGTSVGSLFVEDPD 282
>U84722-1|AAB41796.1| 784|Homo sapiens vascular endothelial
cadherin protein.
Length = 784
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 547 SVTVAIVESKKNKTKLSLQSDDISQVKITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYE 368
++T ++ K+ + ++ +++ D ++ G VLV Q + + + F + YT V E
Sbjct: 210 TITKSLDREKQARYEIVVEARDAQGLRGDSGTATVLVTLQDINDNFPFFTQTKYTFVVPE 269
Query: 367 DTDGAYQANPVIITPPN 317
DT + + P+
Sbjct: 270 DTRVGTSVGSLFVEDPD 286
>BC117520-1|AAI17521.1| 669|Homo sapiens CDH5 protein protein.
Length = 669
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 547 SVTVAIVESKKNKTKLSLQSDDISQVKITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYE 368
++T ++ K+ + ++ +++ D ++ G VLV Q + + + F + YT V E
Sbjct: 210 TITKSLDREKQARYEIVVEARDAQGLRGDSGTATVLVTLQDINDNFPFFTQTKYTFVVPE 269
Query: 367 DTDGAYQANPVIITPPN 317
DT + + P+
Sbjct: 270 DTRVGTSVGSLFVEDPD 286
>BC096365-1|AAH96365.1| 662|Homo sapiens CDH5 protein protein.
Length = 662
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 547 SVTVAIVESKKNKTKLSLQSDDISQVKITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYE 368
++T ++ K+ + ++ +++ D ++ G VLV Q + + + F + YT V E
Sbjct: 210 TITKSLDREKQARYEIVVEARDAQGLRGDSGTATVLVTLQDINDNFPFFTQTKYTFVVPE 269
Query: 367 DTDGAYQANPVIITPPN 317
DT + + P+
Sbjct: 270 DTRVGTSVGSLFVEDPD 286
>BC096364-1|AAH96364.3| 669|Homo sapiens CDH5 protein protein.
Length = 669
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 547 SVTVAIVESKKNKTKLSLQSDDISQVKITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYE 368
++T ++ K+ + ++ +++ D ++ G VLV Q + + + F + YT V E
Sbjct: 210 TITKSLDREKQARYEIVVEARDAQGLRGDSGTATVLVTLQDINDNFPFFTQTKYTFVVPE 269
Query: 367 DTDGAYQANPVIITPPN 317
DT + + P+
Sbjct: 270 DTRVGTSVGSLFVEDPD 286
>BC096363-1|AAH96363.1| 669|Homo sapiens CDH5 protein protein.
Length = 669
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 547 SVTVAIVESKKNKTKLSLQSDDISQVKITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYE 368
++T ++ K+ + ++ +++ D ++ G VLV Q + + + F + YT V E
Sbjct: 210 TITKSLDREKQARYEIVVEARDAQGLRGDSGTATVLVTLQDINDNFPFFTQTKYTFVVPE 269
Query: 367 DTDGAYQANPVIITPPN 317
DT + + P+
Sbjct: 270 DTRVGTSVGSLFVEDPD 286
>AB209908-1|BAD93145.1| 807|Homo sapiens cadherin 5, type 2
preproprotein variant protein.
Length = 807
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 547 SVTVAIVESKKNKTKLSLQSDDISQVKITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYE 368
++T ++ K+ + ++ +++ D ++ G VLV Q + + + F + YT V E
Sbjct: 233 TITKSLDREKQARYEIVVEARDAQGLRGDSGTATVLVTLQDINDNFPFFTQTKYTFVVPE 292
Query: 367 DTDGAYQANPVIITPPN 317
DT + + P+
Sbjct: 293 DTRVGTSVGSLFVEDPD 309
>AB035304-1|BAA87418.1| 784|Homo sapiens cadherin-5 protein.
Length = 784
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 547 SVTVAIVESKKNKTKLSLQSDDISQVKITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYE 368
++T ++ K+ + ++ +++ D ++ G VLV Q + + + F + YT V E
Sbjct: 210 TITKSLDREKQARYEIVVEARDAQGLRGDSGTATVLVTLQDINDNFPFFTQTKYTFVVPE 269
Query: 367 DTDGAYQANPVIITPPN 317
DT + + P+
Sbjct: 270 DTRVGTSVGSLFVEDPD 286
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,656,870
Number of Sequences: 237096
Number of extensions: 2148898
Number of successful extensions: 4805
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4794
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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