Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12g22r
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical pr... 103 1e-22
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 103 1e-22
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 103 1e-22
AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity... 103 1e-22
U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide tr... 92 3e-19
AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity ... 92 3e-19
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 32 0.36
AF003386-7|AAB54258.2| 412|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.4
Z72512-3|CAA96665.2| 310|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical ... 28 5.8
Z49127-11|CAA88952.2| 452|Caenorhabditis elegans Hypothetical p... 28 7.7
AL033535-4|CAA22134.2| 452|Caenorhabditis elegans Hypothetical ... 28 7.7
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical
protein C06G8.2 protein.
Length = 785
Score = 103 bits (248), Expect = 1e-22
Identities = 48/113 (42%), Positives = 71/113 (62%)
Frame = -1
Query: 385 TINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASM 206
T++ D A + N + ILW IPQYV++T GEV+FS+TGLEF++T+A +
Sbjct: 644 TVSTRSKNDSEVLATTESLVSYNRVSILWQIPQYVILTAGEVLFSITGLEFAYTEASPQL 703
Query: 205 KSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA 47
KSV+Q++WL T A G+LIVV+I N + F+F G+ML +F+F +A
Sbjct: 704 KSVVQALWLFTTAIGDLIVVVIFMLNIFSDVAVQMFVFGGIMLFVIFVFILLA 756
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 103 bits (248), Expect = 1e-22
Identities = 50/120 (41%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Frame = -1
Query: 397 GAVYTINVYEDT-DGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQ 221
GAV+ ++++ T +G + ++ PNS+ ILW +PQY+++T+GEV+ SVTGLEF+++Q
Sbjct: 548 GAVHVLHIHPSTTEGDFN----LLVRPNSVSILWSLPQYIIITLGEVLLSVTGLEFAYSQ 603
Query: 220 APASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMAFR 41
A +MKSVL ++WLLTV GNLI ++I + EFF ++ LM++ M +F +A +
Sbjct: 604 AAPNMKSVLTAMWLLTVFAGNLIDMMISGTRLIPHPALEFFFYSTLMVIVMGVFILLAMQ 663
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 103 bits (248), Expect = 1e-22
Identities = 50/120 (41%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Frame = -1
Query: 397 GAVYTINVYEDT-DGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQ 221
GAV+ ++++ T +G + ++ PNS+ ILW +PQY+++T+GEV+ SVTGLEF+++Q
Sbjct: 548 GAVHVLHIHPSTTEGDFN----LLVRPNSVSILWSLPQYIIITLGEVLLSVTGLEFAYSQ 603
Query: 220 APASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMAFR 41
A +MKSVL ++WLLTV GNLI ++I + EFF ++ LM++ M +F +A +
Sbjct: 604 AAPNMKSVLTAMWLLTVFAGNLIDMMISGTRLIPHPALEFFFYSTLMVIVMGVFILLAMQ 663
>AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity
peptide transporter protein.
Length = 785
Score = 103 bits (248), Expect = 1e-22
Identities = 48/113 (42%), Positives = 71/113 (62%)
Frame = -1
Query: 385 TINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASM 206
T++ D A + N + ILW IPQYV++T GEV+FS+TGLEF++T+A +
Sbjct: 644 TVSTRSKNDSEVLATTESLVSYNRVSILWQIPQYVILTAGEVLFSITGLEFAYTEASPQL 703
Query: 205 KSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA 47
KSV+Q++WL T A G+LIVV+I N + F+F G+ML +F+F +A
Sbjct: 704 KSVVQALWLFTTAIGDLIVVVIFMLNIFSDVAVQMFVFGGIMLFVIFVFILLA 756
>U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide
transporter protein 2 protein.
Length = 835
Score = 92.3 bits (219), Expect = 3e-19
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 4/123 (3%)
Frame = -1
Query: 403 KSGAVYTINVYEDTDGAYQANPVI----ITPPNSIHILWLIPQYVVMTMGEVMFSVTGLE 236
K G V+ +Y T G Y+ NP I I NS+ ILW IPQ VV+T E++FS+TG E
Sbjct: 666 KQGGVF---IYALT-GTYE-NPKIHELQIVQSNSVSILWQIPQIVVITAAEILFSITGYE 720
Query: 235 FSFTQAPASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFT 56
F+++Q+ SMK+++Q++WLLT A G+ I+V+I N + EFF++A M + + IF
Sbjct: 721 FAYSQSAPSMKALVQALWLLTTAAGDSIIVVITILNLFENMAVEFFVYAAAMFVVIAIFA 780
Query: 55 AMA 47
++
Sbjct: 781 LLS 783
>AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity
peptide transporter protein.
Length = 796
Score = 92.3 bits (219), Expect = 3e-19
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 4/123 (3%)
Frame = -1
Query: 403 KSGAVYTINVYEDTDGAYQANPVI----ITPPNSIHILWLIPQYVVMTMGEVMFSVTGLE 236
K G V+ +Y T G Y+ NP I I NS+ ILW IPQ VV+T E++FS+TG E
Sbjct: 627 KQGGVF---IYALT-GTYE-NPKIHELQIVQSNSVSILWQIPQIVVITAAEILFSITGYE 681
Query: 235 FSFTQAPASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFT 56
F+++Q+ SMK+++Q++WLLT A G+ I+V+I N + EFF++A M + + IF
Sbjct: 682 FAYSQSAPSMKALVQALWLLTTAAGDSIIVVITILNLFENMAVEFFVYAAAMFVVIAIFA 741
Query: 55 AMA 47
++
Sbjct: 742 LLS 744
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 32.3 bits (70), Expect = 0.36
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = -1
Query: 661 ENTANSFFINR---EGISNFTDNNDKAINGVSVRFLSNVQTSVTVAIVESKKNKTKLSLQ 491
E ++N + + + +GIS+F D + ING R N+ V V+SKK +++
Sbjct: 229 EQSSNKYQVEQTVQDGISDFFDKQELCING--ERTNGNIGPEVVAVNVKSKKGVE--AVK 284
Query: 490 SDDISQVKITK 458
DDI+++K K
Sbjct: 285 QDDITKIKKIK 295
>AF003386-7|AAB54258.2| 412|Caenorhabditis elegans Hypothetical
protein F59E12.8 protein.
Length = 412
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = -1
Query: 376 VYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFT-QAPASMKS 200
VY TD + V + P S + WL+ V+ + V F + +EF T + +S +
Sbjct: 40 VYLITDPQKSVDVVFLFHPFSTTV-WLLLSLTVLVVAIVFFILRFVEFKSTKETESSYEC 98
Query: 199 VLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMF 65
+ S++ + ++ NL + + + F F LF+ + LL F
Sbjct: 99 IQNSIFQVLLSTFNLEIRVAKKSTFF-----AFHLFSTIWLLAWF 138
>AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical
protein ZK355.5 protein.
Length = 505
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 569 PNAYSVDCFVIIISEVRNSLPINEERVSSIFFK*KF 676
PN +++ C V +S + NS IN + V FF F
Sbjct: 115 PNNFNISCTVYGVSIINNSQLINLDAVKEFFFSIPF 150
>Z72512-3|CAA96665.2| 310|Caenorhabditis elegans Hypothetical
protein R07B5.5 protein.
Length = 310
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 299 PENVYTIWWSYNHWICLISTVRVFVNIDSVDCSRFK 406
PENV + W YN W +++ V V C FK
Sbjct: 160 PENVSSFWNQYNLWGAIVTIVVYVYTYLVVYCCAFK 195
>AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical
protein Y43F4B.5a protein.
Length = 595
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 120 SKKFPSTMRTTIKFPKATVRSQTDCSTDFILAGACVKENSKPVTENITSPIVITTY 287
+KK ST+R +KFP ++ D + K ++KPV TS ++T +
Sbjct: 475 TKKLFSTLRADLKFPTKIGEAEVASVRDLTIGYDNSKPDNKPVLPLSTSSEMVTFF 530
>Z49127-11|CAA88952.2| 452|Caenorhabditis elegans Hypothetical
protein F13D12.9 protein.
Length = 452
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 379 NVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGE 263
N E + A Q+ PV++T N IH WL+ M +GE
Sbjct: 58 NAAEPNNNA-QSKPVLLTIHNPIHFCWLMLLDPKMGLGE 95
>AL033535-4|CAA22134.2| 452|Caenorhabditis elegans Hypothetical
protein F13D12.9 protein.
Length = 452
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 379 NVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGE 263
N E + A Q+ PV++T N IH WL+ M +GE
Sbjct: 58 NAAEPNNNA-QSKPVLLTIHNPIHFCWLMLLDPKMGLGE 95
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 27.9 bits (59), Expect = 7.7
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 670 LFKE--NTANSFFINREGISNFTDNND-KAINGVSVRFLS--NVQTSVTVAIVESKKNKT 506
LF+E + N +F + GI +F D D I+G F N+ + + + KK +
Sbjct: 340 LFEEFFKSINQYFDSNNGI-HFIDLKDVMEIDGRWENFYKTLNISNENSKEVRDVKKTEF 398
Query: 505 KLSLQSDDISQVKITKGNGDVLVNDQKVLEGYAFKSGAVYTINVYE 368
+ D++S +KI + + VLE + + T +VYE
Sbjct: 399 TIEDLKDELSYLKIDVSFPEAHEKSEIVLEQFCALKKTITTPDVYE 444
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,798,767
Number of Sequences: 27780
Number of extensions: 355029
Number of successful extensions: 1107
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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