Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g22f
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   1.9  
AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    24   3.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.3  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 222 MECEQFCLCTFETNWASQIM 281
           MEC + C C  + +W+S ++
Sbjct: 756 MECPKQCTCYHDQSWSSNVV 775


>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 359 WLGRFRTIFYLSLVY-ATGSVLISLTAMPPIGLPQFEL 469
           W+     + +L  +   TG VLISL  +P + LP+ ++
Sbjct: 79  WIQNITDLNFLQHIREVTGYVLISLYDLPQVILPRLQI 116


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 359 WLGRFRTIFYLSLVY-ATGSVLISLTAMPPIGLPQFEL 469
           W+     + +L  +   TG VLISL  +P + LP+ ++
Sbjct: 39  WIQNITDLNFLQHIREVTGYVLISLYDLPQVILPRLQI 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,680
Number of Sequences: 2352
Number of extensions: 10390
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)