Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12g22f
(609 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide tr... 163 7e-41
AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity ... 163 7e-41
Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical pr... 159 1e-39
AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity... 159 1e-39
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 152 2e-37
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 152 2e-37
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 36 0.017
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 36 0.017
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81094-3|CAB03151.1| 477|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 28 6.0
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 28 6.0
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 28 6.0
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 28 6.0
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 28 6.0
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 27 7.9
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 27 7.9
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 27 7.9
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 27 7.9
>U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide
transporter protein 2 protein.
Length = 835
Score = 163 bits (397), Expect = 7e-41
Identities = 76/149 (51%), Positives = 109/149 (73%), Gaps = 1/149 (0%)
Frame = +2
Query: 164 YPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGA 343
+PK IV+NEFCERFSYYGMRT+L+ YL + L FTD+ +T+ ++ FT+ Y P+LG+
Sbjct: 44 WPKTTLCIVSNEFCERFSYYGMRTVLTFYLLNVLKFTDSQSTIFFNGFTVLCYTTPLLGS 103
Query: 344 MIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLPQFE-LTILALLLIAFGTGGIKP 520
++ADG++G+F TIF +S++YA G V+++L + + + LL+IAFGTGGIKP
Sbjct: 104 IVADGYIGKFWTIFSVSILYAIGQVVLALASTKNFQSSVHPWMDLSGLLIIAFGTGGIKP 163
Query: 521 CVSAFGGDQFKLPEQAKYLGYYFSLFYFA 607
CVSAFGGDQF+L Q + L +FS+FYF+
Sbjct: 164 CVSAFGGDQFEL-GQERMLSLFFSMFYFS 191
>AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity
peptide transporter protein.
Length = 796
Score = 163 bits (397), Expect = 7e-41
Identities = 76/149 (51%), Positives = 109/149 (73%), Gaps = 1/149 (0%)
Frame = +2
Query: 164 YPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGA 343
+PK IV+NEFCERFSYYGMRT+L+ YL + L FTD+ +T+ ++ FT+ Y P+LG+
Sbjct: 5 WPKTTLCIVSNEFCERFSYYGMRTVLTFYLLNVLKFTDSQSTIFFNGFTVLCYTTPLLGS 64
Query: 344 MIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLPQFE-LTILALLLIAFGTGGIKP 520
++ADG++G+F TIF +S++YA G V+++L + + + LL+IAFGTGGIKP
Sbjct: 65 IVADGYIGKFWTIFSVSILYAIGQVVLALASTKNFQSSVHPWMDLSGLLIIAFGTGGIKP 124
Query: 521 CVSAFGGDQFKLPEQAKYLGYYFSLFYFA 607
CVSAFGGDQF+L Q + L +FS+FYF+
Sbjct: 125 CVSAFGGDQFEL-GQERMLSLFFSMFYFS 152
>Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical
protein C06G8.2 protein.
Length = 785
Score = 159 bits (386), Expect = 1e-39
Identities = 74/168 (44%), Positives = 112/168 (66%), Gaps = 2/168 (1%)
Frame = +2
Query: 110 RPRSTMEHSMEAKTQKLP-YPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDA 286
RP S ++H + +PK IV NE CERFS+YGMR +L+LY + L F+ + +
Sbjct: 11 RPGSPVDHQPTTWGGIIKKWPKQTFLIVGNELCERFSFYGMRAVLTLYFFNILNFSQSFS 70
Query: 287 TVIYHVFTMFAYFFPVLGAMIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLPQFE 466
TV++H FT+ Y P+LG+++ADG++G+F TIF++S+ YA G +L++ +++ P G
Sbjct: 71 TVLFHAFTVICYSSPLLGSILADGYIGKFWTIFFISIFYACGQILLAFSSIAPSGSSHHP 130
Query: 467 -LTILALLLIAFGTGGIKPCVSAFGGDQFKLPEQAKYLGYYFSLFYFA 607
L +L LL++ GTGGIKPCVSAFGGDQF + + +FS+FYF+
Sbjct: 131 LLDLLGLLIVGLGTGGIKPCVSAFGGDQFP-AHYTRMISLFFSMFYFS 177
>AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity
peptide transporter protein.
Length = 785
Score = 159 bits (386), Expect = 1e-39
Identities = 74/168 (44%), Positives = 112/168 (66%), Gaps = 2/168 (1%)
Frame = +2
Query: 110 RPRSTMEHSMEAKTQKLP-YPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDA 286
RP S ++H + +PK IV NE CERFS+YGMR +L+LY + L F+ + +
Sbjct: 11 RPGSPVDHQPTTWGGIIKKWPKQTFLIVGNELCERFSFYGMRAVLTLYFFNILNFSQSFS 70
Query: 287 TVIYHVFTMFAYFFPVLGAMIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLPQFE 466
TV++H FT+ Y P+LG+++ADG++G+F TIF++S+ YA G +L++ +++ P G
Sbjct: 71 TVLFHAFTVICYSSPLLGSILADGYIGKFWTIFFISIFYACGQILLAFSSIAPSGSSHHP 130
Query: 467 -LTILALLLIAFGTGGIKPCVSAFGGDQFKLPEQAKYLGYYFSLFYFA 607
L +L LL++ GTGGIKPCVSAFGGDQF + + +FS+FYF+
Sbjct: 131 LLDLLGLLIVGLGTGGIKPCVSAFGGDQFP-AHYTRMISLFFSMFYFS 177
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 152 bits (368), Expect = 2e-37
Identities = 81/161 (50%), Positives = 105/161 (65%), Gaps = 4/161 (2%)
Frame = +2
Query: 137 MEAKT--QKL-PYPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVF 307
ME K+ QKL YP AV F++ NEFCERFS+YGM+TIL +YL + F+ + AT IYH+F
Sbjct: 1 MEEKSLLQKLRSYPPAVFFMLGNEFCERFSFYGMKTILFIYLITEHEFSPSKATFIYHLF 60
Query: 308 TMFAYFFPVLGAMIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLP-QFELTILAL 484
T AY P++G+++AD GRF+ I Y S +Y G VL+SL A+P + P + L L
Sbjct: 61 TCIAYLTPLIGSIMADSVFGRFKVILYGSSIYVVGHVLLSLGAVPFLSYPIRSSLDFSGL 120
Query: 485 LLIAFGTGGIKPCVSAFGGDQFKLPEQAKYLGYYFSLFYFA 607
+IAF TG IKPCVSAF DQF +Q +FS FYFA
Sbjct: 121 FVIAFATGCIKPCVSAFAADQF-TEDQKDLRSQFFSFFYFA 160
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 152 bits (368), Expect = 2e-37
Identities = 81/161 (50%), Positives = 105/161 (65%), Gaps = 4/161 (2%)
Frame = +2
Query: 137 MEAKT--QKL-PYPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVF 307
ME K+ QKL YP AV F++ NEFCERFS+YGM+TIL +YL + F+ + AT IYH+F
Sbjct: 1 MEEKSLLQKLRSYPPAVFFMLGNEFCERFSFYGMKTILFIYLITEHEFSPSKATFIYHLF 60
Query: 308 TMFAYFFPVLGAMIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLP-QFELTILAL 484
T AY P++G+++AD GRF+ I Y S +Y G VL+SL A+P + P + L L
Sbjct: 61 TCIAYLTPLIGSIMADSVFGRFKVILYGSSIYVVGHVLLSLGAVPFLSYPIRSSLDFSGL 120
Query: 485 LLIAFGTGGIKPCVSAFGGDQFKLPEQAKYLGYYFSLFYFA 607
+IAF TG IKPCVSAF DQF +Q +FS FYFA
Sbjct: 121 FVIAFATGCIKPCVSAFAADQF-TEDQKDLRSQFFSFFYFA 160
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 434 AMPPIGLPQFELTILALLLIAFGTGGIKPCVSA 532
A+PP+ LP+FEL L+L + G GG PC +A
Sbjct: 44 ALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAA 76
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 434 AMPPIGLPQFELTILALLLIAFGTGGIKPCVSA 532
A+PP+ LP+FEL L+L + G GG PC +A
Sbjct: 44 ALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAA 76
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/103 (20%), Positives = 42/103 (40%)
Frame = +2
Query: 269 FTDNDATVIYHVFTMFAYFFPVLGAMIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPI 448
+T D +I+ F L + + + ++G R++ Y + G+ L A
Sbjct: 88 WTSQDRAIIFAAFYAGG-LVATLASEVLNRYIGATRSVLYGGIANVVGTFLTPFVASQT- 145
Query: 449 GLPQFELTILALLLIAFGTGGIKPCVSAFGGDQFKLPEQAKYL 577
F + +L ++ FG G + PC+ F + E++ L
Sbjct: 146 NFGTFPIILLRFVM-GFGQGVLWPCMLVLIAQWFPVNEKSTAL 187
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 434 AMPPIGLPQFELTILALLLI-AFGTGGIKPCVSA 532
++PP+ LP+FEL L+L G GG PC A
Sbjct: 44 SLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGGA 77
>Z81094-3|CAB03151.1| 477|Caenorhabditis elegans Hypothetical
protein F58G11.4 protein.
Length = 477
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 128 EHSMEAKTQKLPYPKAVAFIVT--NEFCERFSYYGMRTILSLYL 253
E S++ + P P +A V +C+ F+YY + T+ ++
Sbjct: 230 EKSLQEDDENWPRPDKLAMFVCMLTRYCQNFTYYAIETLAPAFM 273
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 304 HVVDDCGVIICEAQFVSKVQRQNCSHSI 221
H+VDDC +C A+ + ++ C S+
Sbjct: 684 HIVDDCTSCVCSAEGSADCYKEACDESL 711
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 304 HVVDDCGVIICEAQFVSKVQRQNCSHSI 221
H+VDDC +C A+ + ++ C S+
Sbjct: 618 HIVDDCTSCVCSAEGSADCYKEACDESL 645
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 304 HVVDDCGVIICEAQFVSKVQRQNCSHSI 221
H+VDDC +C A+ + ++ C S+
Sbjct: 684 HIVDDCTSCVCSAEGSADCYKEACDESL 711
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 304 HVVDDCGVIICEAQFVSKVQRQNCSHSI 221
H+VDDC +C A+ + ++ C S+
Sbjct: 618 HIVDDCTSCVCSAEGSADCYKEACDESL 645
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 304 HVVDDCGVIICEAQFVSKVQRQNCSHSI 221
H+VDDC +C A+ + ++ C S+
Sbjct: 618 HIVDDCTSCVCSAEGSADCYKEACDESL 645
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 304 HVVDDCGVIICEAQFVSKVQRQNCSHSI 221
H+VDDC +C A+ + ++ C S+
Sbjct: 618 HIVDDCTSCVCSAEGSADCYKEACDESL 645
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 385 KYGPESSEPSIGNHGSENREEVSKHREHVVDDCGVI 278
K E + + S N EEV ++ EHV D+C V+
Sbjct: 437 KNSDEFPDEGSQSEASVNNEEVLENVEHVEDECTVV 472
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 385 KYGPESSEPSIGNHGSENREEVSKHREHVVDDCGVI 278
K E + + S N EEV ++ EHV D+C V+
Sbjct: 437 KNSDEFPDEGSQSEASVNNEEVLENVEHVEDECTVV 472
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 385 KYGPESSEPSIGNHGSENREEVSKHREHVVDDCGVI 278
K E + + S N EEV ++ EHV D+C V+
Sbjct: 437 KNSDEFPDEGSQSEASVNNEEVLENVEHVEDECTVV 472
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 385 KYGPESSEPSIGNHGSENREEVSKHREHVVDDCGVI 278
K E + + S N EEV ++ EHV D+C V+
Sbjct: 437 KNSDEFPDEGSQSEASVNNEEVLENVEHVEDECTVV 472
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,952,536
Number of Sequences: 27780
Number of extensions: 256013
Number of successful extensions: 648
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -