Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g18f
         (608 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51889| Best HMM Match : PPTA (HMM E-Value=6.3e-34)                  62   3e-10
SB_45447| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_41971| Best HMM Match : CAT_RBD (HMM E-Value=2)                     29   2.9  
SB_31815| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0024)            29   2.9  
SB_29447| Best HMM Match : VWA (HMM E-Value=0.36)                      29   2.9  
SB_9903| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0051)             29   2.9  
SB_9411| Best HMM Match : Exo_endo_phos (HMM E-Value=0.19)             29   2.9  
SB_49272| Best HMM Match : CAT_RBD (HMM E-Value=2)                     29   2.9  
SB_46747| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_32319| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_40811| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_47214| Best HMM Match : CAT_RBD (HMM E-Value=1.5)                   29   3.9  
SB_35714| Best HMM Match : Vicilin_N (HMM E-Value=5)                   29   3.9  

>SB_51889| Best HMM Match : PPTA (HMM E-Value=6.3e-34)
          Length = 428

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 30/71 (42%), Positives = 39/71 (54%)
 Frame = +3

Query: 348 HGRVKVRTSXXXXXXXXXXXXXXXXIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPD 527
           HGR+KVRTS                +F    QKI  KR++   D+E L+LT  +L  NPD
Sbjct: 1   HGRIKVRTSEEQAAAKRKEREKKMKLFSDLDQKINKKREKREFDEEALDLTEQILGVNPD 60

Query: 528 IYTLWNIRRDI 560
           + TLWN RR+I
Sbjct: 61  VSTLWNFRREI 71


>SB_45447| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1200

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462 KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
           KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 708 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 746


>SB_41971| Best HMM Match : CAT_RBD (HMM E-Value=2)
          Length = 295

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462 KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
           KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 251 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 289


>SB_31815| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0024)
          Length = 1163

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462 KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
           KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 156 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 194



 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462  KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
            KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 953  KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 991


>SB_29447| Best HMM Match : VWA (HMM E-Value=0.36)
          Length = 329

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462 KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
           KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 194 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 232


>SB_9903| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0051)
          Length = 891

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462 KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
           KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 781 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 819


>SB_9411| Best HMM Match : Exo_endo_phos (HMM E-Value=0.19)
          Length = 891

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462 KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
           KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 750 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 788


>SB_49272| Best HMM Match : CAT_RBD (HMM E-Value=2)
          Length = 318

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462 KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
           KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 194 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 232


>SB_46747| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 576

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462 KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
           KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 135 KECKNEKENLRSLGKLLSKQPDQRKLGAVLKEKKKSFKK 173


>SB_32319| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 551

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462 KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
           KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 5   KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 43


>SB_40811| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 522

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 516 SNPDIYTLWNIRRDILQLFKKAMI 587
           SNPD+   W   +D++QL+K+  I
Sbjct: 484 SNPDLRVCWTTIKDVVQLYKRRPI 507


>SB_47214| Best HMM Match : CAT_RBD (HMM E-Value=1.5)
          Length = 238

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 462 KECTLDKELLELTGNVLSSNPDIYTLWNIRRDILQLFKK 578
           KEC  +KE L   G +LS  PD   L  + ++  + FKK
Sbjct: 194 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKEKSFKK 232


>SB_35714| Best HMM Match : Vicilin_N (HMM E-Value=5)
          Length = 288

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 516 SNPDIYTLWNIRRDILQLFKKAMI 587
           SNPD+   W   +D++QL+K+  I
Sbjct: 250 SNPDLRVCWTTIKDVVQLYKRRPI 273


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,970,480
Number of Sequences: 59808
Number of extensions: 250935
Number of successful extensions: 348
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)