Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g18f
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058618-1|AAL13847.1|  515|Drosophila melanogaster LD31216p pro...    61   1e-09
AE014297-179|AAF52072.1|  515|Drosophila melanogaster CG12007-PA...    61   1e-09
AY118534-1|AAM49903.1|  331|Drosophila melanogaster LD26412p pro...    33   0.30 
AE014134-777|AAF50977.1|  331|Drosophila melanogaster CG2976-PA ...    33   0.30 
AY094856-1|AAM11209.1|  367|Drosophila melanogaster RE18536p pro...    29   6.6  
AF271718-1|AAL36976.1|  367|Drosophila melanogaster innexin 4 pr...    29   6.6  
AE014296-1130|AAF50655.1|  367|Drosophila melanogaster CG10125-P...    29   6.6  

>AY058618-1|AAL13847.1|  515|Drosophila melanogaster LD31216p
           protein.
          Length = 515

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 31/71 (43%), Positives = 40/71 (56%)
 Frame = +3

Query: 345 MHGRVKVRTSXXXXXXXXXXXXXXXXIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 524
           MHGRVKVRT+                 ++ AM +IQ KR+   LD E+L LT  +L  NP
Sbjct: 1   MHGRVKVRTTEEERERKKKEQALKVRAYRAAMGRIQKKREAGELDNEMLSLTVQILLRNP 60

Query: 525 DIYTLWNIRRD 557
           D+  LWNIRR+
Sbjct: 61  DVSMLWNIRRE 71


>AE014297-179|AAF52072.1|  515|Drosophila melanogaster CG12007-PA
           protein.
          Length = 515

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 31/71 (43%), Positives = 40/71 (56%)
 Frame = +3

Query: 345 MHGRVKVRTSXXXXXXXXXXXXXXXXIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 524
           MHGRVKVRT+                 ++ AM +IQ KR+   LD E+L LT  +L  NP
Sbjct: 1   MHGRVKVRTTEEERERKKKEQALKVRAYRAAMGRIQKKREAGELDNEMLSLTVQILLRNP 60

Query: 525 DIYTLWNIRRD 557
           D+  LWNIRR+
Sbjct: 61  DVSMLWNIRRE 71


>AY118534-1|AAM49903.1|  331|Drosophila melanogaster LD26412p
           protein.
          Length = 331

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 489 LELTGNVLSSNPDIYTLWNIRRDILQLFK 575
           L+LT + L  NP  YT+W  RRD+L+  K
Sbjct: 68  LDLTTDALRLNPANYTVWQYRRDVLRELK 96


>AE014134-777|AAF50977.1|  331|Drosophila melanogaster CG2976-PA
           protein.
          Length = 331

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 489 LELTGNVLSSNPDIYTLWNIRRDILQLFK 575
           L+LT + L  NP  YT+W  RRD+L+  K
Sbjct: 68  LDLTTDALRLNPANYTVWQYRRDVLRELK 96


>AY094856-1|AAM11209.1|  367|Drosophila melanogaster RE18536p
           protein.
          Length = 367

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = -3

Query: 231 ILKERQQTFFKIVFTN*SSDYKITMLNYF-SLICC*L--LLIQKPNFIMYV*LFG 76
           + K++ +T  +++    SSDYK T   YF S + C +  L I   NF++    FG
Sbjct: 151 VCKDKSRTHLRVLVNYFSSDYKETHFRYFVSYVFCEILNLSISILNFLLLDVFFG 205


>AF271718-1|AAL36976.1|  367|Drosophila melanogaster innexin 4
           protein.
          Length = 367

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = -3

Query: 231 ILKERQQTFFKIVFTN*SSDYKITMLNYF-SLICC*L--LLIQKPNFIMYV*LFG 76
           + K++ +T  +++    SSDYK T   YF S + C +  L I   NF++    FG
Sbjct: 151 VCKDKSRTHLRVLVNYFSSDYKETHFRYFVSYVFCEILNLSISILNFLLLDVFFG 205


>AE014296-1130|AAF50655.1|  367|Drosophila melanogaster CG10125-PA
           protein.
          Length = 367

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = -3

Query: 231 ILKERQQTFFKIVFTN*SSDYKITMLNYF-SLICC*L--LLIQKPNFIMYV*LFG 76
           + K++ +T  +++    SSDYK T   YF S + C +  L I   NF++    FG
Sbjct: 151 VCKDKSRTHLRVLVNYFSSDYKETHFRYFVSYVFCEILNLSISILNFLLLDVFFG 205


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,292,786
Number of Sequences: 53049
Number of extensions: 356357
Number of successful extensions: 516
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)