Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g13f
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.4  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   1.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.3  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 471 KEIADLKDEIINSYNAGNSQLCAQDIEEFKKW 566
           +E   L  EI  SY++ N  LC  D +  +++
Sbjct: 650 QENVQLCSEISESYSSNNKTLCKCDAQNCRRY 681


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 536 CSGHRGIQEMDLERDPGGIAIFPH 607
           C G    + MD+E DPG  A+  +
Sbjct: 41  CMGGINSRNMDIEHDPGLAAVLQY 64


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 566 DLERDPGGIAIFPHGHWL 619
           +L+   GG+ +  H HWL
Sbjct: 497 ELDSKTGGVNLKGHAHWL 514


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,772
Number of Sequences: 438
Number of extensions: 3017
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)