Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g12r
         (485 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   1.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   1.8  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   3.2  
AY341209-1|AAR13773.1|  196|Anopheles gambiae SP14D1 protein.          22   9.7  
AY341208-1|AAR13772.1|  196|Anopheles gambiae SP14D1 protein.          22   9.7  
AY341207-1|AAR13771.1|  196|Anopheles gambiae SP14D1 protein.          22   9.7  
AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.          22   9.7  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -2

Query: 259 PDNRDSSQRKRNIAVSNREGIQRRCRIQHREHRIQKRTGKRVPL 128
           P  R+  Q ++  AV  R     +  +  R +R++  TG+ VP+
Sbjct: 333 PTEREEQQMQKEAAVMARTMNLNQVCLCFRAYRVEPGTGRWVPI 376


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 235  RKRNIAVSNREGIQRRCRIQHREHRIQKRTGKRVPLSVG 119
            R+   A S  + I+RR R   RE    +RT +RVP + G
Sbjct: 1165 RRSRSAPSEADTIRRRMR--RREMERLRRTARRVPSNQG 1201


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 145 RCVSEFYVHGVESDTAAEYPHGWRLRYSA 231
           R   +F    + ++T    PHGW  R +A
Sbjct: 358 RIPRDFDTQNLTTETLGPLPHGWEQRKTA 386


>AY341209-1|AAR13773.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
 Frame = -1

Query: 422 CRPTKRRTSNLLEDPN*TSASLVSKTVYYFVAMSPVRRQVRP-----GLISFGTRSRLVP 258
           C P  +R    L+     +  +  K      +  P+ RQ+       G++SFG +    P
Sbjct: 116 CSPAYQRNGISLDSTQMCAGGIRGKDTCSGDSGGPLMRQMTGSWYLIGVVSFGPQKCGAP 175

Query: 257 G*PRFEPEKAEY 222
           G P      AEY
Sbjct: 176 GVPGVYTNVAEY 187


>AY341208-1|AAR13772.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
 Frame = -1

Query: 422 CRPTKRRTSNLLEDPN*TSASLVSKTVYYFVAMSPVRRQVRP-----GLISFGTRSRLVP 258
           C P  +R    L+     +  +  K      +  P+ RQ+       G++SFG +    P
Sbjct: 116 CSPAYQRNGISLDSTQMCAGGIRGKDTCSGDSGGPLMRQMTGSWYLIGVVSFGPQKCGAP 175

Query: 257 G*PRFEPEKAEY 222
           G P      AEY
Sbjct: 176 GVPGVYTNVAEY 187


>AY341207-1|AAR13771.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
 Frame = -1

Query: 422 CRPTKRRTSNLLEDPN*TSASLVSKTVYYFVAMSPVRRQVRP-----GLISFGTRSRLVP 258
           C P  +R    L+     +  +  K      +  P+ RQ+       G++SFG +    P
Sbjct: 116 CSPAYQRNGISLDSTQMCAGGIRGKDTCSGDSGGPLMRQMTGSWYLIGVVSFGPQKCGAP 175

Query: 257 G*PRFEPEKAEY 222
           G P      AEY
Sbjct: 176 GVPGVYTNVAEY 187


>AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
 Frame = -1

Query: 422 CRPTKRRTSNLLEDPN*TSASLVSKTVYYFVAMSPVRRQVRP-----GLISFGTRSRLVP 258
           C P  +R    L+     +  +  K      +  P+ RQ+       G++SFG +    P
Sbjct: 116 CSPAYQRNGISLDSTQMCAGGIRGKDTCSGDSGGPLMRQMSGSWYLIGVVSFGPQKCGAP 175

Query: 257 G*PRFEPEKAEY 222
           G P      AEY
Sbjct: 176 GVPGVYTNVAEY 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,546
Number of Sequences: 2352
Number of extensions: 10562
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)