Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g12r
         (485 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-P...    38   0.010
AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-P...    36   0.022
BT003307-1|AAO25067.1|  661|Drosophila melanogaster GH08772p pro...    34   0.090
AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P...    34   0.090
AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P...    34   0.090
BT023029-1|AAY55445.1|  112|Drosophila melanogaster IP04046p pro...    32   0.48 
AE013599-1627|AAF58432.1|  112|Drosophila melanogaster CG13323-P...    32   0.48 
AE013599-1628|AAF58431.1|  112|Drosophila melanogaster CG13324-P...    31   0.84 
AY119110-1|AAM50970.1|  441|Drosophila melanogaster RE12054p pro...    29   3.4  
AE013599-3953|AAF47269.1|   92|Drosophila melanogaster CG16914-P...    29   3.4  
AE013599-233|AAM70833.1|  449|Drosophila melanogaster CG3287-PC,...    29   3.4  
AE013599-232|AAG22207.2|  449|Drosophila melanogaster CG3287-PB,...    29   3.4  
AY553964-1|AAS90558.1|  766|Drosophila melanogaster pyramus prot...    28   5.9  
AE013599-1341|AAF58624.2|  702|Drosophila melanogaster CG13194-P...    28   5.9  

>AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-PA
           protein.
          Length = 122

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = -3

Query: 255 ITAIRARESGISQSPTVRVFSGGVGFNTVNIEFRNAPGRGYRYQLEIWG 109
           IT I+  +    +  T  + SGGVG  TV I+F +A G G + Q+ I+G
Sbjct: 72  ITYIKITDLKKMRGATAEITSGGVGSTTVTIKFTSARGAGIKSQVVIYG 120


>AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-PA
           protein.
          Length = 117

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 255 ITAIRARESGISQSPTVRVFSGGVGFNTVNIEFRNAPGRGYRYQLEIWGR 106
           ITAI+  +   S   T  + SGG G     I+F +  G G +  +EIWGR
Sbjct: 68  ITAIKITDKKKSHGATAVLVSGGPGSKGATIKFTSERGYGIKDIVEIWGR 117


>BT003307-1|AAO25067.1|  661|Drosophila melanogaster GH08772p
           protein.
          Length = 661

 Score = 34.3 bits (75), Expect = 0.090
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 256 DNRDSSQRKRNIAVSNREGIQRRCRIQHREHRIQKR 149
           D+ DS Q  R   VSNR G+    R QH ++ IQ R
Sbjct: 296 DDEDSDQDDRRSLVSNRSGMTSASRSQHHQNHIQPR 331


>AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB,
           isoform B protein.
          Length = 2922

 Score = 34.3 bits (75), Expect = 0.090
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 256 DNRDSSQRKRNIAVSNREGIQRRCRIQHREHRIQKR 149
           D+ DS Q  R   VSNR G+    R QH ++ IQ R
Sbjct: 522 DDEDSDQDDRRSLVSNRSGMTSASRSQHHQNHIQPR 557


>AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA,
           isoform A protein.
          Length = 2594

 Score = 34.3 bits (75), Expect = 0.090
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 256 DNRDSSQRKRNIAVSNREGIQRRCRIQHREHRIQKR 149
           D+ DS Q  R   VSNR G+    R QH ++ IQ R
Sbjct: 469 DDEDSDQDDRRSLVSNRSGMTSASRSQHHQNHIQPR 504


>BT023029-1|AAY55445.1|  112|Drosophila melanogaster IP04046p
           protein.
          Length = 112

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 201 VFSGGVGFNTVNIEFRNAPGRGYRYQLEIWGR 106
           ++SGG G+    +  R    RG    +EIWGR
Sbjct: 81  LYSGGPGYRFATVNLRGQVNRGINSTVEIWGR 112


>AE013599-1627|AAF58432.1|  112|Drosophila melanogaster CG13323-PA
           protein.
          Length = 112

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 201 VFSGGVGFNTVNIEFRNAPGRGYRYQLEIWGR 106
           ++SGG G+    +  R    RG    +EIWGR
Sbjct: 81  LYSGGPGYRFATVNLRGQVNRGINSTVEIWGR 112


>AE013599-1628|AAF58431.1|  112|Drosophila melanogaster CG13324-PA
           protein.
          Length = 112

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 201 VFSGGVGFNTVNIEFRNAPGRGYRYQLEIWGR 106
           ++SGG G+    +  R    RG    +EIWGR
Sbjct: 81  LYSGGPGYRFATVNLRGQVNRGIDSTVEIWGR 112


>AY119110-1|AAM50970.1|  441|Drosophila melanogaster RE12054p
           protein.
          Length = 441

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 350 KTVYYFVAMSPVRRQVRPGLISFGTRSR 267
           KT Y +  +SP RRQ+ PG+++    SR
Sbjct: 168 KTDYTYSELSPHRRQLAPGIVAMPNMSR 195


>AE013599-3953|AAF47269.1|   92|Drosophila melanogaster CG16914-PA
           protein.
          Length = 92

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = -3

Query: 462 MKLILFVLAVTAVVSANEEANVKSSRRSELNL 367
           MK ++ +  + AVV ANEEA+V  S  SE+NL
Sbjct: 1   MKFVIVLACLLAVVFANEEADVVKS-DSEVNL 31


>AE013599-233|AAM70833.1|  449|Drosophila melanogaster CG3287-PC,
           isoform C protein.
          Length = 449

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 350 KTVYYFVAMSPVRRQVRPGLISFGTRSR 267
           KT Y +  +SP RRQ+ PG+++    SR
Sbjct: 168 KTDYTYSELSPHRRQLAPGIVAMPNMSR 195


>AE013599-232|AAG22207.2|  449|Drosophila melanogaster CG3287-PB,
           isoform B protein.
          Length = 449

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 350 KTVYYFVAMSPVRRQVRPGLISFGTRSR 267
           KT Y +  +SP RRQ+ PG+++    SR
Sbjct: 168 KTDYTYSELSPHRRQLAPGIVAMPNMSR 195


>AY553964-1|AAS90558.1|  766|Drosophila melanogaster pyramus
           protein.
          Length = 766

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
 Frame = -2

Query: 256 DNRDSSQRKRNIAVSNREGIQRRCRIQHREHRIQKR--------TGKRVPLSVGDLGTMI 101
           +N ++S     + +  ++ I +R R  HR HR+Q++          +R     G +G M 
Sbjct: 265 NNNNNSSNNNELDLQQQQVILQRNRKLHRRHRLQQKKRQLQLQQQQRRRQRQYGTMGVMA 324

Query: 100 KWQPSNV 80
           + QP N+
Sbjct: 325 QPQPKNL 331


>AE013599-1341|AAF58624.2|  702|Drosophila melanogaster CG13194-PA
           protein.
          Length = 702

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
 Frame = -2

Query: 256 DNRDSSQRKRNIAVSNREGIQRRCRIQHREHRIQKR--------TGKRVPLSVGDLGTMI 101
           +N ++S     + +  ++ I +R R  HR HR+Q++          +R     G +G M 
Sbjct: 201 NNNNNSSNNNELDLQQQQVILQRNRKLHRRHRLQQKKRQLQLQQQQRRRQRQYGTMGVMA 260

Query: 100 KWQPSNV 80
           + QP N+
Sbjct: 261 QPQPKNL 267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,039,733
Number of Sequences: 53049
Number of extensions: 450350
Number of successful extensions: 1113
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)