Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g12f
         (534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   2.1  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    24   2.8  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   3.7  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 227 PDNRDSSQRKRNIAVSNREGIQRRCRIQHREHRIQKRTGKRVPL 358
           P  R+  Q ++  AV  R     +  +  R +R++  TG+ VP+
Sbjct: 333 PTEREEQQMQKEAAVMARTMNLNQVCLCFRAYRVEPGTGRWVPI 376


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 251  RKRNIAVSNREGIQRRCRIQHREHRIQKRTGKRVPLSVG 367
            R+   A S  + I+RR R   RE    +RT +RVP + G
Sbjct: 1165 RRSRSAPSEADTIRRRMR--RREMERLRRTARRVPSNQG 1201


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 429 VYQSIKVRNYYCGDTIFNIILCFY 500
           +Y +    NYYC +   + + CFY
Sbjct: 158 IYNNNYYYNYYCRNISHHFLRCFY 181


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 341 RCVSEFYVHGVESDTAAEYPHGWRLRYSA 255
           R   +F    + ++T    PHGW  R +A
Sbjct: 358 RIPRDFDTQNLTTETLGPLPHGWEQRKTA 386


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,369
Number of Sequences: 2352
Number of extensions: 11781
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)