Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g09r
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC092497-1|AAH92497.1|  132|Homo sapiens LOC283951 protein protein.    30   5.4  
AE006467-6|AAK61280.1|  356|Homo sapiens unknown protein.              30   5.4  

>BC092497-1|AAH92497.1|  132|Homo sapiens LOC283951 protein protein.
          Length = 132

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -1

Query: 358 EINENEPVKFSTSRA-ASRGPVPLISKINDDMPWYQPYVVIGSVAIFMLYFCVLREESDI 182
           E + + P++FS+S+A   R  V          PW++  + +    + ++ +C LREES+ 
Sbjct: 43  EDDPDRPIEFSSSKANPHRWSVGHTMGKGHQRPWWK-VLPLSCFLVALIIWCYLREESEA 101

Query: 181 DR 176
           D+
Sbjct: 102 DQ 103


>AE006467-6|AAK61280.1|  356|Homo sapiens unknown protein.
          Length = 356

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -1

Query: 358 EINENEPVKFSTSRA-ASRGPVPLISKINDDMPWYQPYVVIGSVAIFMLYFCVLREESDI 182
           E + + P++FS+S+A   R  V          PW++  + +    + ++ +C LREES+ 
Sbjct: 200 EDDPDRPIEFSSSKANPHRWSVGHTMGKGHQRPWWK-VLPLSCFLVALIIWCYLREESEA 258

Query: 181 DR 176
           D+
Sbjct: 259 DQ 260


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,029,806
Number of Sequences: 237096
Number of extensions: 1221334
Number of successful extensions: 5980
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5978
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)