Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g09f
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   4.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   5.8  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   7.6  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 527 SKRDCWKLRRQRRNYS 574
           +K +C+ LRR R+NY+
Sbjct: 212 NKLNCYDLRRVRKNYN 227


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 323 FILLIKGTGPLEAALLVENFT 261
           + L    TGPL+ A+  +NFT
Sbjct: 66  YYLPAMSTGPLKYAIFQKNFT 86


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 167 FSYFYA*HYFDSFEKFIVSQF 105
           F   YA  YF  + +FIV  F
Sbjct: 426 FFKLYAVEYFQMYAQFIVGTF 446


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 500 KNMVKVLLKSKRDCWK 547
           K +++ L K+K+D WK
Sbjct: 86  KTVIQHLYKNKQDWWK 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,142
Number of Sequences: 336
Number of extensions: 2215
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)