Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12g07r
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 9e-28
SB_26325| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_16276| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 3e-19
SB_14579| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2) 73 2e-13
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33) 39 0.003
SB_53126| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 29 3.7
SB_22490| Best HMM Match : Fz (HMM E-Value=8.3e-32) 29 4.9
>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 120 bits (290), Expect = 9e-28
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Frame = -1
Query: 687 PEYNSKIIAMQAYAPVAYLEFNANRLLKLIAPHANSIEALTSLIGINELFGRSDFFTNLG 508
P K+ A A APV+ + + LK +A + IE L ++G+ + D L
Sbjct: 450 PAVIQKVKAFYALAPVSTVS-HMGGALKYLAYLSPEIEFLFKVLGVRDFLPTDDVMRVLA 508
Query: 507 MRFCADGTFFQAMCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINKN 328
C + + +C++ LF AG N T LP+ + HTPAG +V+ + H+ Q+ +
Sbjct: 509 DLVCRPD-YIRVVCSDFLFLIAGMDRSQLNETRLPIYISHTPAGTSVKNVVHFAQIFREK 567
Query: 327 FFRRYDHGRL-TNWRVYRSFTPPRYDLSLITAPVFLHYVDEDIFADVRDVRKLHAELGRS 151
F+ YD+G N Y TPP+Y++S + P L++ D+ AD DV L A+L
Sbjct: 568 KFQMYDYGSAEKNKHKYNQDTPPQYNVSAVKVPSALYWGGHDVLADPTDVEDLLAKLPHQ 627
Query: 150 VGMFRVPHATFSHLDFMWGSGAKDLLYDRTIQILRS 43
M+ T+ HLDF+W A L+YD I+ ++S
Sbjct: 628 --MYNKYLPTWDHLDFIWALDAASLVYDDVIRHIKS 661
>SB_26325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Frame = -1
Query: 414 TMLPVKLGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRL-TNWRVYRSFTPPRYDLSLIT 238
T LP+ + HTPAG +V+ + H+ Q+ + F+ YD+G N Y TPP+Y++S +
Sbjct: 1 TRLPIYISHTPAGTSVKNVVHFAQIFREKKFQMYDYGSAEKNKHKYNQDTPPQYNVSAVK 60
Query: 237 APVFLHYVDEDIFADVRDVRKLHAELGRSVGMFRVPHATFSHLDFMWGSGAKDLLYDRTI 58
P L++ D+ AD DV+ L A+L M+ T+ HLDF+W A L+YD I
Sbjct: 61 VPSALYWGGHDVLADPTDVKDLLAKLPHQ--MYNKYLPTWDHLDFIWALDAASLVYDDVI 118
Query: 57 QILRS 43
+ ++S
Sbjct: 119 RHIKS 123
>SB_16276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 92.3 bits (219), Expect = 3e-19
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Frame = -1
Query: 414 TMLPVKLGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRL-TNWRVYRSFTPPRYDLSLIT 238
T LP+ + HTPAG +V+ + H+ Q+ + F+ YD+G N Y TPP+Y++S +
Sbjct: 1 TRLPIYISHTPAGTSVKNVVHFAQIFREKKFQMYDYGSAEKNKHKYNQDTPPQYNVSAVK 60
Query: 237 APVFLHYVDEDIFADVRDVRKLHAELGRSVGMFRVPHATFSHLDFMWGSGAKDLLYDRTI 58
P L++ D+ AD DV L A+L M+ T+ HLDF+W A L+YD I
Sbjct: 61 VPSALYWGGHDVLADPTDVEDLLAKLPHQ--MYNKYLPTWDHLDFIWALDAASLVYDDVI 118
Query: 57 QILRS 43
+ ++S
Sbjct: 119 RHIKS 123
>SB_14579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 90.2 bits (214), Expect = 1e-18
Identities = 45/125 (36%), Positives = 67/125 (53%)
Frame = -1
Query: 414 TMLPVKLGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRLTNWRVYRSFTPPRYDLSLITA 235
T LPV + HTPAG +V+ + HY Q+ F YD+G+ N + Y TPP+Y++S IT
Sbjct: 1 TRLPVYISHTPAGTSVKNMIHYAQMYKSKKFEMYDYGK-DNIKRYGQNTPPQYNISAITV 59
Query: 234 PVFLHYVDEDIFADVRDVRKLHAELGRSVGMFRVPHATFSHLDFMWGSGAKDLLYDRTIQ 55
P L++ D AD DV L L + + HLDF+WG A +L+YD +
Sbjct: 60 PTMLYWGGNDWLADPDDVSLLMKALPPKTLIDNKELKAWQHLDFIWGLDAAELVYDDIVT 119
Query: 54 ILRSL 40
++ +
Sbjct: 120 RIKKM 124
>SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)
Length = 265
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/149 (26%), Positives = 74/149 (49%)
Frame = -1
Query: 489 GTFFQAMCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINKNFFRRYD 310
G + + +C +++ G N T +PV + H G + + I H+ Q++ +N +++D
Sbjct: 117 GKWTEKLCYDLMETVVGFDSPNINETRVPVYVSHFFEGTSFKDIVHFSQMMYQNRCQKFD 176
Query: 309 HGRLTNWRVYRSFTPPRYDLSLITAPVFLHYVDEDIFADVRDVRKLHAELGRSVGMFRVP 130
+G N + Y TPP + + P L Y ++D D D + L + + V +
Sbjct: 177 YGEAGNMKRYNKTTPPLCHVQDMPTPTVLFYGEKDGLGDPVDAQALKSLVQNLVHSEEMK 236
Query: 129 HATFSHLDFMWGSGAKDLLYDRTIQILRS 43
++HLDF++G A LLY R + +L++
Sbjct: 237 E--WNHLDFLYGVDAFKLLYPRIVDLLKA 263
>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
Length = 991
Score = 39.1 bits (87), Expect = 0.003
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -1
Query: 420 NATMLPVKLGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRLTNWRVY 280
N + +PV + H +G + + + H+GQ++ ++Y++G NW Y
Sbjct: 347 NMSRVPVIMSHWGSGTSFKNMVHFGQMVTSGKCQKYNYGYFYNWMKY 393
>SB_53126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = -1
Query: 267 PPRYDLSLITAPVFLHYVDEDIFADVRDVRKLHAELGRSVGMFRVPHATFSHLDFMWGSG 88
PP Y + + P L D AD DV +L + V +P ++H DF++G
Sbjct: 3 PPHYRVKDMDVPTVLFSGSHDTLADPLDVGELKPRIQNLVHSEEIPG--WNHADFLFGMD 60
Query: 87 AKDLLYDRTIQIL 49
A+ LLY + ++++
Sbjct: 61 AERLLYRKIVKMM 73
>SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -1
Query: 519 TNLGMRFCADGTFFQAMCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQL 340
T LG FC G + +C ++ G + N + +PV H P+G + + I H+GQ+
Sbjct: 201 TKLG--FCG-GKYKAKLCYDISELIFGFDDGNANMSRVPVFFTHFPSGTSFKNIIHFGQV 257
Query: 339 IN 334
N
Sbjct: 258 HN 259
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 20 NKFYSSPNDLNI*IVLS*SKSLAPDPHMKSR*LKVACGTLNIPTER 157
N SP+ L ++ K+ DP KS+ L+ CG +PTE+
Sbjct: 1524 NHVKPSPHKLPSFVIHDIKKAALLDPSKKSKDLQKGCGMAYVPTEK 1569
>SB_22490| Best HMM Match : Fz (HMM E-Value=8.3e-32)
Length = 308
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 423 HNATMLPVKLGHTPAGIAVRQIAHYGQLINKN 328
+N T LP LGHT +I Y QLI+ N
Sbjct: 38 YNMTRLPNHLGHTSQRQIEHEINEYSQLISAN 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,707,645
Number of Sequences: 59808
Number of extensions: 470913
Number of successful extensions: 977
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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