Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12g07r
(705 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g15230.1 68415.m01737 lipase family protein similar to SP|P07... 87 1e-17
At5g14180.1 68418.m01658 lipase family protein similar to SP|Q64... 60 2e-09
At1g72940.1 68414.m08436 disease resistance protein (TIR-NBS cla... 29 3.0
At1g72920.1 68414.m08434 disease resistance protein (TIR-NBS cla... 29 3.0
At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger) fa... 28 5.2
At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger) fa... 28 5.2
At3g57570.1 68416.m06410 expressed protein 28 6.9
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 28 6.9
At4g04110.1 68417.m00581 Toll-Interleukin-Resistance (TIR) domai... 27 9.2
At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger) fa... 27 9.2
>At2g15230.1 68415.m01737 lipase family protein similar to SP|P07098
Triacylglycerol lipase, gastric precursor (EC 3.1.1.3)
{Homo sapiens}; contains Pfam profile PF04083:
ab-hydrolase associated lipase region
Length = 393
Score = 86.6 bits (205), Expect = 1e-17
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 3/219 (1%)
Frame = -1
Query: 690 RPEYNSKIIAMQAYAPVAYLEFNANRLL-KLIAPHANSIEALTSLIGINELFGRSDFFTN 514
+P + A P++YL+ L+ +++ H ++ + +G++++ RSD
Sbjct: 178 QPHVAEMVEAAALLCPISYLDHVTAPLVERMVFMH---LDQMVVALGLHQINFRSDMLVK 234
Query: 513 LGMRFCADGTFFQAMCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLIN 334
L C +G CT+ L + G + NA+ + L + P +V+ I H Q+I
Sbjct: 235 LVDSLC-EG---HMDCTDFLTSITG-TNCCFNASKIEYYLDYEPHPSSVKNIRHLFQMIR 289
Query: 333 KNFFRRYDHGRLTNWRVYRSFTPPRYDLSLITA--PVFLHYVDEDIFADVRDVRKLHAEL 160
K F +YD+G N R Y PP + LS I A P+++ Y D ADV DV AEL
Sbjct: 290 KGTFAQYDYGYFKNLRTYGLSKPPEFILSHIPASLPMWMGYGGTDGLADVTDVEHTLAEL 349
Query: 159 GRSVGMFRVPHATFSHLDFMWGSGAKDLLYDRTIQILRS 43
S + + + H+DF+ GS AK+ +Y IQ R+
Sbjct: 350 PSSPELLYL--EDYGHIDFVLGSSAKEDVYKHMIQFFRA 386
>At5g14180.1 68418.m01658 lipase family protein similar to SP|Q64194
Lysosomal acid lipase/cholesteryl ester hydrolase
precursor (EC 3.1.1.13) {Rattus norvegicus}; contains
Pfam profile PF04083: ab-hydrolase associated lipase
region
Length = 418
Score = 59.7 bits (138), Expect = 2e-09
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 5/200 (2%)
Frame = -1
Query: 648 APVAYLEFNANRLLKLIAPHANSIEALTSLIGINELFGRSDFFTNLGMRFCADGTFFQAM 469
+PVAYL + ++ IA EA TS++G E +S + C
Sbjct: 216 SPVAYLS-HMTTVIGDIAAKTFLAEA-TSILGWPEFNPKSGLVGDFIKAICLKAGID--- 270
Query: 468 CTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRLT-N 292
C +++ G++ + NA+ + + L + P + + + H Q + R+Y++G N
Sbjct: 271 CYDLVSVITGKNCCL-NASTIDLFLANEPQSTSTKNMIHLAQTVRDKELRKYNYGSSDRN 329
Query: 291 WRVYRSFTPPRYDLSLIT--APVFLHYVDEDIFADVRDVRKLHAELG-RSVGMFRVPHAT 121
+ Y PP Y++S I P+F Y D ADV+DV L + + V
Sbjct: 330 IKHYGQAIPPAYNISAIPHELPLFFSYGGLDSLADVKDVEFLLDQFKYHDIDKMNVQFVK 389
Query: 120 -FSHLDFMWGSGAKDLLYDR 64
++H DF+ G AKD++Y++
Sbjct: 390 DYAHADFIMGVTAKDVVYNQ 409
>At1g72940.1 68414.m08436 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 371
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 432 EDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRLTNWR 286
E+ + T++P+ G P + RQI + K+ R DH ++ +WR
Sbjct: 91 ENKGSITVMPIFYGVDPCHLR-RQIGDVAEQFKKHEAREEDHEKVASWR 138
>At1g72920.1 68414.m08434 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 275
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 432 EDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINKNFFRRYDHGRLTNWR 286
E+ + T++P+ G P + RQI + K+ R DH ++ +WR
Sbjct: 91 ENKGSITVMPIFYGVDPCHLR-RQIGDVAEQFKKHEAREEDHEKVASWR 138
>At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 438
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +2
Query: 353 CAICLTAMPAGVCPSFTGNIVALCMSSLRPAKANN 457
CAICL A VC G+ VA CMS L+ K+ N
Sbjct: 387 CAICLDAPSEAVCVP-CGH-VAGCMSCLKEIKSKN 419
>At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 462
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +2
Query: 353 CAICLTAMPAGVCPSFTGNIVALCMSSLRPAKANN 457
CAICL A VC G+ VA CMS L+ K+ N
Sbjct: 411 CAICLDAPSEAVCVP-CGH-VAGCMSCLKEIKSKN 443
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1
Query: 642 VAYLEFNANRLLKLIAPHANSIEALTSLIG 553
V L F+++R+LKLI A S++ SLIG
Sbjct: 587 VTGLTFDSDRVLKLIPEWARSVQNWNSLIG 616
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 435 CVRQKRITYLCTSPGKMCHQRRISF 509
C + I LCTS GK+ + RR++F
Sbjct: 658 CTPGRMIDILCTSSGKITNLRRVTF 682
>At4g04110.1 68417.m00581 Toll-Interleukin-Resistance (TIR)
domain-containing protein domain signature TIR exists,
suggestive of a disease resistance protein.
Length = 239
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 468 CTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINK 331
C N L ED + ++PV G P+ + +QI ++G++ K
Sbjct: 113 CLNELLEIVRCKEDSNRLVVIPVFYGLDPSHVR-KQIGNFGKIFKK 157
>At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 492
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 429 LHCVRQKRITYLCTSP--GKMCHQRRISF 509
LH + QKR+ Y+ T+P K+ H R +SF
Sbjct: 116 LHWLAQKRVEYIETTPSVSKLSHFRIVSF 144
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,000,161
Number of Sequences: 28952
Number of extensions: 319325
Number of successful extensions: 690
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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