Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12g07f
(556 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33) 141 4e-34
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 7e-31
SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06) 101 5e-22
SB_44624| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.00027) 31 0.48
SB_18547| Best HMM Match : Vicilin_N (HMM E-Value=1.6) 31 0.48
SB_22351| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08) 30 1.1
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_44676| Best HMM Match : Bim_N (HMM E-Value=0.83) 29 1.9
SB_42397| Best HMM Match : rve (HMM E-Value=0.0007) 29 1.9
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 29 1.9
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14) 29 1.9
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 29 1.9
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 29 1.9
SB_32265| Best HMM Match : Bim_N (HMM E-Value=1.5) 29 1.9
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 29 1.9
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 29 1.9
SB_19685| Best HMM Match : Retrotrans_gag (HMM E-Value=0.061) 29 1.9
SB_10546| Best HMM Match : Bim_N (HMM E-Value=0.83) 29 1.9
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_37908| Best HMM Match : Retrotrans_gag (HMM E-Value=0.067) 29 2.6
SB_33099| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0) 29 2.6
SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058) 29 3.4
SB_37380| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=5.2) 28 4.5
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
Length = 991
Score = 141 bits (341), Expect = 4e-34
Identities = 62/121 (51%), Positives = 82/121 (67%)
Frame = +2
Query: 176 LIKKYRYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPKKPAVLVMHGLFASAADWVLM 355
LI+ YPVE H V T DG+IL +QRIPHGR++ +KP V + HGL + +WVL
Sbjct: 111 LIRNRGYPVEEHYVTTSDGFILNLQRIPHGRNELREGSGRKPVVFLQHGLLMDSTNWVLN 170
Query: 356 GPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLPAMID 535
P L YILA+ G+DVWLGN RG YS AH+K + D+ S+FW ++W+++ DLPAMID
Sbjct: 171 SPHDSLGYILADKGFDVWLGNIRGNEYSAAHVKWNKDS-SKFWDWTWQQMAQYDLPAMID 229
Query: 536 Y 538
Y
Sbjct: 230 Y 230
>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 130 bits (314), Expect = 7e-31
Identities = 61/132 (46%), Positives = 83/132 (62%)
Frame = +2
Query: 161 LDIVGLIKKYRYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPKKPAVLVMHGLFASAA 340
+++ LI+ YPVE + V TEDGYIL +QRIP+GR+ + KP V + HGL SA
Sbjct: 296 MNVTQLIQYNGYPVEDYDVTTEDGYILSVQRIPYGREGKCKGVKDKPVVFLQHGLLCSAT 355
Query: 341 DWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDL 520
+WV +ILA+ +DVWLGN RG Y + H+KL D+D+ FW FS++E+ DL
Sbjct: 356 NWVTNLYNESFGFILADQCFDVWLGNVRGNTYGKRHVKLPVDSDA-FWDFSFDEMAKYDL 414
Query: 521 PAMIDYTLKVAG 556
PAMID+ K G
Sbjct: 415 PAMIDFVTKTTG 426
>SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)
Length = 226
Score = 101 bits (241), Expect = 5e-22
Identities = 47/103 (45%), Positives = 62/103 (60%)
Frame = +2
Query: 248 QRIPHGRDQNNRPDPKKPAVLVMHGLFASAADWVLMGPGVGLAYILAEAGYDVWLGNARG 427
QRIP+GR + KP V + HGL SA +WV +ILA+ +DVWLGN RG
Sbjct: 2 QRIPYGRKGKCKGVKDKPVVFLQHGLLCSATNWVTNLYNESFGFILADQCFDVWLGNVRG 61
Query: 428 TYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAG 556
Y + H+KL D+D+ FW FS++E+ DLPAMID+ K G
Sbjct: 62 NTYGKRHVKLPVDSDA-FWDFSFDEMAKYDLPAMIDFVTKTTG 103
>SB_44624| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.00027)
Length = 299
Score = 31.5 bits (68), Expect = 0.48
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 284 PDPKKPAVLVMHGLFASAADW 346
PDP P + +MHGLF + +W
Sbjct: 64 PDPPDPPLFIMHGLFGNKKNW 84
>SB_18547| Best HMM Match : Vicilin_N (HMM E-Value=1.6)
Length = 203
Score = 31.5 bits (68), Expect = 0.48
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 50 VNQATARRSPHADYVEELYRLDAQGARYSTNVTEDALLDIVGLIKKYRYPVEVHKVVTED 229
V ++ RR P AD +YR +++ + D++ DIVG I YR E + T+D
Sbjct: 6 VGRSVYRREPEADVGSSVYRRESEAGVGGSVYRRDSVADIVGGI--YRRESEANVGATDD 63
>SB_22351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 30.7 bits (66), Expect = 0.84
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +1
Query: 223 GRWLY-LRNAKNSSWTRPEQP 282
G WLY L N N SW RP QP
Sbjct: 38 GSWLYTLENPPNLSWLRPRQP 58
>SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08)
Length = 416
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 390 SAKMYAKPTPGPIKTQSAAEANSPCITKTAG 298
S K+ +P PGP++ +S++ + SP ++ T G
Sbjct: 187 SEKLKPQPRPGPLRKRSSSSSRSPVLSVTDG 217
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 252 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 293
>SB_44676| Best HMM Match : Bim_N (HMM E-Value=0.83)
Length = 253
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 129 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 170
>SB_42397| Best HMM Match : rve (HMM E-Value=0.0007)
Length = 729
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 252 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 293
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 252 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 293
>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
Length = 1447
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 269 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 310
>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
Length = 1026
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 9 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 50
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 267 PAPSPPQADQAKEATCPGCQKTFRLFTEGARGWNKKPHQLCI 308
>SB_32265| Best HMM Match : Bim_N (HMM E-Value=1.5)
Length = 235
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 9 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 50
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 252 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 293
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 252 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 293
>SB_19685| Best HMM Match : Retrotrans_gag (HMM E-Value=0.061)
Length = 335
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 252 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 293
>SB_10546| Best HMM Match : Bim_N (HMM E-Value=0.83)
Length = 335
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 109 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 150
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 230 PAPSPPQADQAKEATCPGCQKTFKLFTEGARGWNKKPHQLCI 271
>SB_37908| Best HMM Match : Retrotrans_gag (HMM E-Value=0.067)
Length = 449
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 369 PTPGPIKTQSAAEANSPCITKTAGFFGSGRLFWSRP*GILCI 244
P P P + A EA P KT F G W++ LCI
Sbjct: 252 PAPSPPQADQAKEATYPGCQKTFKLFTEGARGWNKKPHQLCI 293
>SB_33099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 149 EDALLDIVGLIKKYRYPVEVHKVVTEDG 232
ED+L D + L++KY +P V+ + T+ G
Sbjct: 164 EDSLSDAIDLLRKYGFPTNVYPLGTKRG 191
>SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
Length = 1788
Score = 29.1 bits (62), Expect = 2.6
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +2
Query: 164 DIVGLIKKYRYPVEVHKVVTEDGYIL---EMQRIPHGRDQNNRPDPKKPAVLVMHGLFAS 334
DIV +K Y + V + DG L E + HG NR + V+ + +
Sbjct: 1342 DIVDKLKGY-FVERVANITVNDGLSLAGWEDGLLGHGEVPYNRKSFRNSNVMAY--AWNN 1398
Query: 335 AADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFW 484
+W G G AY+LA AGY V + A Y+ + + DP +W
Sbjct: 1399 IWEW---GSGKR-AYLLANAGYKVVMTQATHLYFDFPY-EPDPQERGYYW 1443
>SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058)
Length = 1002
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 65 ARRSPHADYVEELYRLDAQGARYSTNVTEDALLDIVGLIKKYRYPVE-VHKVVTEDGYI 238
+R S +DY + Y+ ++ G +T A I GL+K+ P E + V D Y+
Sbjct: 223 SRLSNTSDYEQHTYKANSPGPETERTMTFYASARIDGLVKREETPEEMIETYVDRDDYL 281
>SB_37380| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=5.2)
Length = 322
Score = 28.3 bits (60), Expect = 4.5
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 149 EDALLDIVGLIKKYRYPVEVHKV 217
ED+L D + L++KY +P V+++
Sbjct: 124 EDSLSDAIDLLRKYGFPTNVYRI 146
>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 45 YVLIRRPLGVLHMRTTSRNCTGWTPKVP 128
+V RP+ VL T + NC W P VP
Sbjct: 233 HVKNERPIAVLCGHTRTVNCVTWNPLVP 260
>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1576
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 115 RPRCPLFYQCN*RCFARYC 171
RPRC + Y N +CFA +C
Sbjct: 1298 RPRCDIAYMENNKCFAVHC 1316
>SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 188 YRYPVEVHKVVTEDGYILEMQRIPHGR 268
Y Y E H V+ G E + IPHGR
Sbjct: 224 YDYTNETHNVLDRLGLCTENREIPHGR 250
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,336,442
Number of Sequences: 59808
Number of extensions: 421082
Number of successful extensions: 1050
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1288581898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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