Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g07f
         (556 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   1.3  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   2.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   5.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   5.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   5.1  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   6.7  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -1

Query: 133 ITGTLGVQPVQFLDVVRMWRTPSGRLINTYTEKQS 29
           +TG  GV PV  L   R W +P    ++ Y    S
Sbjct: 537 VTGLPGVAPVPALATGRGWSSPQASPVSGYDSSTS 571


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 202 RSSQGRYGRWLYLRN-AKNSSWTRPEQPS*P 291
           RS+Q   GR  Y+ +  K + W+RP +P+ P
Sbjct: 170 RSAQN--GRTYYVNHYTKTTQWSRPTEPAGP 198


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -3

Query: 413 QATHHNQLQPKCMLNQHLDPSKPSQQQKQTVH 318
           Q THH Q Q     +Q      PS Q +Q  H
Sbjct: 250 QQTHHQQQQHPSS-HQQQSQQHPSSQHQQPTH 280


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -3

Query: 413 QATHHNQLQPKCMLNQHLDPSKPSQQQKQTVH 318
           Q THH Q Q     +Q      PS Q +Q  H
Sbjct: 250 QQTHHQQQQHPSS-HQQQSQQHPSSQHQQPTH 280


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -3

Query: 413 QATHHNQLQPKCMLNQHLDPSKPSQQQKQTVH 318
           Q THH Q Q     +Q      PS Q +Q  H
Sbjct: 202 QQTHHQQQQHPSS-HQQQSQQHPSSQHQQPTH 232


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 334 CC*LGFDGSRCWFSIHFG 387
           CC L +D  RC+   H+G
Sbjct: 131 CCCLAYDSFRCYLQ-HYG 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,053
Number of Sequences: 2352
Number of extensions: 14363
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)