Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12g07f
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.51 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   2.1  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    23   2.1  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    23   2.1  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   2.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   2.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 425 HVHFQATHHNQLQPKCMLNQHLDPSKPSQQQKQ 327
           H H Q  HH+ LQ   + + H  P +  QQQ+Q
Sbjct: 141 HHHLQ-NHHHHLQSTAVQDHH-RPYQQQQQQQQ 171



 Score = 24.2 bits (50), Expect = 0.90
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
 Frame = -3

Query: 419 HFQATHHN-QLQPKCMLNQHLDPSKPSQQQKQTVHA*LKQLVSSGQDGCSGRVHEE 255
           H Q+TH   Q Q +    Q     +P QQQ+Q      +Q      D  +  + EE
Sbjct: 816 HHQSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQQQQRGPMTNDDFNPNIEEE 871


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 122 GARYSTNVTEDALLDIVGLIKKYRYPVEVHKVV 220
           G  +  N T+  + DIVG +KK      V  VV
Sbjct: 8   GGNWKMNGTKSEINDIVGFLKKGPLDSNVEVVV 40


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 528 IAGRSRVPISSQLNFQNSESLSGSNL 451
           + G S V + SQ+N   S  +SG+N+
Sbjct: 30  VKGESNVDVVSQINSLVSSIVSGANV 55


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 528 IAGRSRVPISSQLNFQNSESLSGSNL 451
           + G S V + SQ+N   S  +SG+N+
Sbjct: 30  VKGESNVDVVSQINSLVSSIVSGANV 55


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +2

Query: 14 MKWLLGLF-FCICVNQAT 64
          MK ++ +F FCICVN  T
Sbjct: 1  MKTIVVIFAFCICVNAMT 18


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +2

Query: 14 MKWLLGLF-FCICVNQAT 64
          MK ++ +F FCICVN  T
Sbjct: 1  MKTIVVIFAFCICVNAMT 18


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,184
Number of Sequences: 438
Number of extensions: 3601
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)