Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f23f
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 228 YSESYLYFMNRNQKITINVGKGKMN*ICAISF**IFLGNI 109
           Y  S L  M +N+ +T+NV   K+   CA     + LG I
Sbjct: 539 YLASELVLMLKNRFVTLNVQLTKLTKNCATKAQSVVLGRI 578


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +1

Query: 124 YLLETYCAYLVHFTFAYINCDFLISIHKIQIALRIYAF 237
           +LL   C Y  ++      C F+I    +   L IY F
Sbjct: 251 HLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 503 NDTVLFKIKTTAPKKYCVR 559
           ND +LF +K   P+  C R
Sbjct: 225 NDVLLFFVKVFRPEPLCER 243


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 87  VFIIYKKKYCLKIFTRNLLRIFSSFYL 167
           VF+++   YC K   +++  + S  YL
Sbjct: 13  VFLLFYLFYCYKTIKQHIYSLISLSYL 39


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 87  VFIIYKKKYCLKIFTRNLLRIFSSFYL 167
           VF+++   YC K   +++  + S  YL
Sbjct: 13  VFLLFYLFYCYKTIKQHIYSLISLSYL 39


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +3

Query: 78  YFLVFIIYKKKYCLKIFTRNLLRIFSSFYLCLH*L*FFDFYS*NTNSSQNIRL 236
           YF++F +++  Y  K  T   +  F S  L +  L    FY    N    + L
Sbjct: 298 YFIIFQVFESFYLHKATTLETVYYFISLGLLILRLVSVCFYGSWINEESKLSL 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,574
Number of Sequences: 336
Number of extensions: 3118
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)