Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f23f
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   1.9  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    24   4.4  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   5.8  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   5.8  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   5.8  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   7.7  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 340  EKKYLSAMSAKANENCGMTNRHAQSTAHALSL 245
            EKK L  +  KA E C   N    +T+H+ +L
Sbjct: 1461 EKKSLYKLHIKATEECTNANLSLDTTSHSGNL 1492


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -2

Query: 462 SKSPEKLTLNFNSFCGSIVSTWLGILLYYKHSISLAKFNRLRK 334
           +K  E +  NFN     I   W G LL  K    LAK  + +K
Sbjct: 222 AKLVETIKTNFNDRFDDIRRHWGGGLLGPKSMARLAKLEKAKK 264


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 336 FSIC*ILPTRYCAYSTIKCLTKC 404
           +S C   P + C    +KC T C
Sbjct: 32  YSCCAPCPQKACISEAVKCQTSC 54


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 269 EHCACVVSFLSKAYILRAIC 210
           E+C CV+ +L K Y    IC
Sbjct: 377 ENCGCVLYYLPKLYEDTKIC 396


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 269 EHCACVVSFLSKAYILRAIC 210
           E+C CV+ +L K Y    IC
Sbjct: 377 ENCGCVLYYLPKLYEDTKIC 396


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 466 WLHNLHETNEPDKRYSAIQDQNNS 537
           W H+  E N+P  RY+ +   ++S
Sbjct: 691 WDHSNMEVNKPKNRYANVTSYDHS 714


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,850
Number of Sequences: 2352
Number of extensions: 13577
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)